RNA–Protein interactions for RNA: ENST00000424614.1

OPTN-207, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-207ENST00000424614 AEBP2Q6ZN18 517 aaPredicted RBP22.5■■□□□ 1.19
OPTN-207ENST00000424614 CHIC1Q5VXU3 224 aa21.8■■□□□ 1.08
OPTN-207ENST00000424614 SENP3Q9H4L4 574 aaPredicted RBP19.27■□□□□ 0.68
OPTN-207ENST00000424614 PHF23Q9BUL5 403 aaPredicted RBP19.08■□□□□ 0.64
OPTN-207ENST00000424614 FOXD1Q16676 465 aa17.83■□□□□ 0.44
OPTN-207ENST00000424614 PLPPR3Q6T4P5 718 aa17.65■□□□□ 0.42
OPTN-207ENST00000424614 PPP6R1Q9UPN7 881 aa16.91■□□□□ 0.3
OPTN-207ENST00000424614 ADRA2BP18089 450 aa16.9■□□□□ 0.3
OPTN-207ENST00000424614 PIAS4Q8N2W9 510 aaPredicted RBP16.78■□□□□ 0.28
OPTN-207ENST00000424614 MSH5O43196 834 aa16.65■□□□□ 0.26
OPTN-207ENST00000424614 SCAF1Q9H7N4 1312 aaKnown RBP15.64■□□□□ 0.09
OPTN-207ENST00000424614 POTEDQ86YR6 584 aa15.53■□□□□ 0.08
OPTN-207ENST00000424614 PPP4R3CPQ6ZMV5 832 aa15.47■□□□□ 0.07
OPTN-207ENST00000424614 MAPK8IP2Q13387 824 aaPredicted RBP15.39■□□□□ 0.05
OPTN-207ENST00000424614 DMRT2Q9Y5R5 561 aa15.31■□□□□ 0.04
OPTN-207ENST00000424614 CNKSR2Q8WXI2 1034 aa15.14■□□□□ 0.01
OPTN-207ENST00000424614 NCBP3Q53F19 620 aaKnown RBP15.08■□□□□ 0
OPTN-207ENST00000424614 RNF216Q9NWF9 866 aaPredicted RBP14.9□□□□□ -0.02
OPTN-207ENST00000424614 HOXD11P31277 338 aaPredicted RBP14.89□□□□□ -0.03
OPTN-207ENST00000424614 KCNA4P22459 653 aa14.75□□□□□ -0.05
OPTN-207ENST00000424614 NPM3O75607 178 aaKnown RBP14.74□□□□□ -0.05
OPTN-207ENST00000424614 DCAF8L1A6NGE4 600 aa14.65□□□□□ -0.06
OPTN-207ENST00000424614 DNAJC5BQ9UF47 199 aa14.45□□□□□ -0.1
OPTN-207ENST00000424614 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.21□□□□□ -0.133e-8■□□□□ 10.7
OPTN-207ENST00000424614 RNF39Q9H2S5 420 aa14.19□□□□□ -0.14
OPTN-207ENST00000424614 C1QBPQ07021 282 aaKnown RBP14.07□□□□□ -0.16
OPTN-207ENST00000424614 SLC4A1APQ9BWU0 796 aaKnown RBP14.06□□□□□ -0.16
OPTN-207ENST00000424614 CACNB1Q02641 598 aaPredicted RBP14.03□□□□□ -0.16
OPTN-207ENST00000424614 SLC4A2P04920 1241 aa13.96□□□□□ -0.17
OPTN-207ENST00000424614 U3KPZ7 1027 aaPredicted RBP13.89□□□□□ -0.19
OPTN-207ENST00000424614 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.78□□□□□ -0.2
OPTN-207ENST00000424614 HNRNPUL2Q1KMD3 747 aaKnown RBP13.78□□□□□ -0.2
OPTN-207ENST00000424614 APLP2Q06481 763 aa13.72□□□□□ -0.21
OPTN-207ENST00000424614 FOXD4L1Q9NU39 408 aa13.72□□□□□ -0.21
OPTN-207ENST00000424614 MYCNP04198 464 aaPredicted RBP13.69□□□□□ -0.22
OPTN-207ENST00000424614 SAMD1Q6SPF0 538 aaPredicted RBP13.67□□□□□ -0.22
OPTN-207ENST00000424614 CAPN15O75808 1086 aa13.58□□□□□ -0.24
OPTN-207ENST00000424614 SPINK5Q9NQ38 1064 aaPredicted RBP13.56□□□□□ -0.24
OPTN-207ENST00000424614 ZBTB22O15209 634 aa13.52□□□□□ -0.25
OPTN-207ENST00000424614 ZNF219Q9P2Y4 722 aaPredicted RBP13.5□□□□□ -0.25
OPTN-207ENST00000424614 TRHP20396 242 aaPredicted RBP13.44□□□□□ -0.26
OPTN-207ENST00000424614 DSG3P32926 999 aa13.4□□□□□ -0.26
OPTN-207ENST00000424614 ATXN8OSP0DMR3 200 aa13.34□□□□□ -0.27
OPTN-207ENST00000424614 EHMT2Q96KQ7 1210 aa13.29□□□□□ -0.28
OPTN-207ENST00000424614 CSRNP3Q8WYN3 585 aa13.28□□□□□ -0.28
OPTN-207ENST00000424614 ABCB7O75027 752 aa13.23□□□□□ -0.29
OPTN-207ENST00000424614 ATF5Q9Y2D1 282 aaPredicted RBP13.22□□□□□ -0.29
OPTN-207ENST00000424614 POLA2Q14181 598 aa13.17□□□□□ -0.3
OPTN-207ENST00000424614 ZBTB12Q9Y330 459 aaPredicted RBP13.04□□□□□ -0.32
OPTN-207ENST00000424614 RBM42Q9BTD8 480 aaKnown RBP12.87□□□□□ -0.35
OPTN-207ENST00000424614 FBLN2P98095 1184 aa12.84□□□□□ -0.35
OPTN-207ENST00000424614 OSCARQ8IYS5 282 aa12.69□□□□□ -0.38
OPTN-207ENST00000424614 MKRN4PQ13434 485 aaPredicted RBP12.65□□□□□ -0.38
OPTN-207ENST00000424614 AKT1S1Q96B36 256 aa12.62□□□□□ -0.39
OPTN-207ENST00000424614 SPDYE2BA6NHP3 402 aa12.61□□□□□ -0.39
OPTN-207ENST00000424614 SPDYE6P0CI01 402 aa12.61□□□□□ -0.39
OPTN-207ENST00000424614 SPDYE2Q495Y8 402 aa12.61□□□□□ -0.39
OPTN-207ENST00000424614 ZNF692Q9BU19 519 aaPredicted RBP12.5□□□□□ -0.41
OPTN-207ENST00000424614 REM2Q8IYK8 340 aaPredicted RBP12.46□□□□□ -0.41
OPTN-207ENST00000424614 SSUH2Q9Y2M2 353 aa12.44□□□□□ -0.42
OPTN-207ENST00000424614 CHRDL2Q6WN34 429 aa12.37□□□□□ -0.43
OPTN-207ENST00000424614 SPDYE4A6NLX3 237 aa12.32□□□□□ -0.44
OPTN-207ENST00000424614 SPDYE1Q8NFV5 336 aaPredicted RBP12.31□□□□□ -0.44
OPTN-207ENST00000424614 PABPN1Q86U42 306 aaKnown RBP eCLIP12.3□□□□□ -0.44
OPTN-207ENST00000424614 PITPNM1O00562 1244 aa12.29□□□□□ -0.44
OPTN-207ENST00000424614 POTEHQ6S545 545 aa12.28□□□□□ -0.44
OPTN-207ENST00000424614 CLEC11AQ9Y240 323 aa12.22□□□□□ -0.45
OPTN-207ENST00000424614 STAG3Q9UJ98 1225 aa12.15□□□□□ -0.46
OPTN-207ENST00000424614 FXR2P51116 673 aaKnown RBP eCLIP12.14□□□□□ -0.47
OPTN-207ENST00000424614 PIP4P2Q8N4L2 257 aa12.13□□□□□ -0.47
OPTN-207ENST00000424614 PRR29P0C7W0 189 aa12.11□□□□□ -0.47
OPTN-207ENST00000424614 PROM2Q8N271 834 aa12.06□□□□□ -0.48
OPTN-207ENST00000424614 FKBP8Q14318 412 aa12.04□□□□□ -0.48
OPTN-207ENST00000424614 PRKAR2AP13861 404 aaKnown RBP12□□□□□ -0.49
OPTN-207ENST00000424614 CHADLQ6NUI6 762 aa11.89□□□□□ -0.51
OPTN-207ENST00000424614 HAX1O00165 279 aa11.85□□□□□ -0.51
OPTN-207ENST00000424614 CREBZFQ9NS37 354 aa11.83□□□□□ -0.52
OPTN-207ENST00000424614 FBXO3Q9UK99 471 aa11.81□□□□□ -0.52
OPTN-207ENST00000424614 FARP1Q9Y4F1 1045 aaPredicted RBP11.81□□□□□ -0.52
OPTN-207ENST00000424614 PLEKHG5O94827 1062 aa11.78□□□□□ -0.52
OPTN-207ENST00000424614 C19orf67A6NJJ6 358 aa11.74□□□□□ -0.53
OPTN-207ENST00000424614 MIER1Q8N108 512 aa11.74□□□□□ -0.53
OPTN-207ENST00000424614 NPM1P06748 294 aaKnown RBP eCLIP11.73□□□□□ -0.53
OPTN-207ENST00000424614 PLCD3Q8N3E9 789 aa11.69□□□□□ -0.54
OPTN-207ENST00000424614 SP7Q8TDD2 431 aaPredicted RBP11.69□□□□□ -0.54
OPTN-207ENST00000424614 MNX1P50219 401 aaPredicted RBP11.66□□□□□ -0.54
OPTN-207ENST00000424614 CD44P16070 742 aaKnown RBP11.65□□□□□ -0.54
OPTN-207ENST00000424614 ZBTB47Q9UFB7 747 aaPredicted RBP11.65□□□□□ -0.54
OPTN-207ENST00000424614 EVX2Q03828 476 aa11.62□□□□□ -0.55
OPTN-207ENST00000424614 PAK3O75914 559 aaPredicted RBP11.61□□□□□ -0.55
OPTN-207ENST00000424614 CLCN6P51797 869 aa11.57□□□□□ -0.56
OPTN-207ENST00000424614 VASPP50552 380 aaPredicted RBP11.56□□□□□ -0.56
OPTN-207ENST00000424614 ZRANB1Q9UGI0 708 aa11.54□□□□□ -0.56
OPTN-207ENST00000424614 ZNF579Q8NAF0 562 aaKnown RBP11.49□□□□□ -0.57
OPTN-207ENST00000424614 GABBR2O75899 941 aa11.46□□□□□ -0.57
OPTN-207ENST00000424614 KLHL34Q8N239 644 aa11.46□□□□□ -0.57
OPTN-207ENST00000424614 TSPYL2Q9H2G4 693 aaPredicted RBP11.44□□□□□ -0.58
OPTN-207ENST00000424614 NUBP1P53384 320 aa11.42□□□□□ -0.58
OPTN-207ENST00000424614 RASEFQ8IZ41 740 aa11.4□□□□□ -0.58
OPTN-207ENST00000424614 FAM212AQ96EL1 285 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms