RNA–Protein interactions for RNA: ENST00000424527.5

PCCA-205, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 3

Gene PCCA, Length 447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-205ENST00000424527 AEBP2Q6ZN18 517 aaPredicted RBP22.25■■□□□ 1.15
PCCA-205ENST00000424527 CHIC1Q5VXU3 224 aa20.88■□□□□ 0.93
PCCA-205ENST00000424527 SENP3Q9H4L4 574 aaPredicted RBP19.13■□□□□ 0.65
PCCA-205ENST00000424527 PHF23Q9BUL5 403 aaPredicted RBP18.79■□□□□ 0.6
PCCA-205ENST00000424527 FOXD1Q16676 465 aa17.83■□□□□ 0.44
PCCA-205ENST00000424527 POTEDQ86YR6 584 aa17.21■□□□□ 0.35
PCCA-205ENST00000424527 MSH5O43196 834 aa16.94■□□□□ 0.3
PCCA-205ENST00000424527 PIAS4Q8N2W9 510 aaPredicted RBP16.54■□□□□ 0.24
PCCA-205ENST00000424527 PLPPR3Q6T4P5 718 aa16.41■□□□□ 0.22
PCCA-205ENST00000424527 PPP6R1Q9UPN7 881 aa16.31■□□□□ 0.2
PCCA-205ENST00000424527 ADRA2BP18089 450 aa16.21■□□□□ 0.19
PCCA-205ENST00000424527 DMRT2Q9Y5R5 561 aa15.1■□□□□ 0.01
PCCA-205ENST00000424527 MAPK8IP2Q13387 824 aaPredicted RBP15.02■□□□□ -0
PCCA-205ENST00000424527 SCAF1Q9H7N4 1312 aaKnown RBP14.96□□□□□ -0.01
PCCA-205ENST00000424527 CACNB1Q02641 598 aaPredicted RBP14.74□□□□□ -0.05
PCCA-205ENST00000424527 DCAF8L1A6NGE4 600 aa14.41□□□□□ -0.1
PCCA-205ENST00000424527 HOXD11P31277 338 aaPredicted RBP14.38□□□□□ -0.11
PCCA-205ENST00000424527 RNF39Q9H2S5 420 aa14.37□□□□□ -0.11
PCCA-205ENST00000424527 PPP4R3CPQ6ZMV5 832 aa14.29□□□□□ -0.12
PCCA-205ENST00000424527 C1QBPQ07021 282 aaKnown RBP14.18□□□□□ -0.14
PCCA-205ENST00000424527 CNKSR2Q8WXI2 1034 aa14.17□□□□□ -0.14
PCCA-205ENST00000424527 RNF216Q9NWF9 866 aaPredicted RBP14.16□□□□□ -0.14
PCCA-205ENST00000424527 DNAJC5BQ9UF47 199 aa14.08□□□□□ -0.16
PCCA-205ENST00000424527 NCBP3Q53F19 620 aaKnown RBP13.67□□□□□ -0.22
PCCA-205ENST00000424527 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.65□□□□□ -0.22
PCCA-205ENST00000424527 POTEHQ6S545 545 aa13.41□□□□□ -0.26
PCCA-205ENST00000424527 NPM3O75607 178 aaKnown RBP13.4□□□□□ -0.26
PCCA-205ENST00000424527 DSG3P32926 999 aa13.3□□□□□ -0.28
PCCA-205ENST00000424527 U3KPZ7 1027 aaPredicted RBP13.3□□□□□ -0.28
PCCA-205ENST00000424527 CAPN15O75808 1086 aa13.23□□□□□ -0.29
PCCA-205ENST00000424527 SPINK5Q9NQ38 1064 aaPredicted RBP13.22□□□□□ -0.29
PCCA-205ENST00000424527 APLP2Q06481 763 aa13□□□□□ -0.33
PCCA-205ENST00000424527 ZNF219Q9P2Y4 722 aaPredicted RBP12.94□□□□□ -0.34
PCCA-205ENST00000424527 SLC4A2P04920 1241 aa12.9□□□□□ -0.34
PCCA-205ENST00000424527 TRHP20396 242 aaPredicted RBP12.9□□□□□ -0.34
PCCA-205ENST00000424527 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.87□□□□□ -0.35
PCCA-205ENST00000424527 HNRNPUL2Q1KMD3 747 aaKnown RBP12.87□□□□□ -0.35
PCCA-205ENST00000424527 ABCB7O75027 752 aa12.84□□□□□ -0.35
PCCA-205ENST00000424527 KCNA4P22459 653 aa12.84□□□□□ -0.35
PCCA-205ENST00000424527 RBM42Q9BTD8 480 aaKnown RBP12.76□□□□□ -0.37
PCCA-205ENST00000424527 SAMD1Q6SPF0 538 aaPredicted RBP12.75□□□□□ -0.37
PCCA-205ENST00000424527 CHRDL2Q6WN34 429 aa12.59□□□□□ -0.39
PCCA-205ENST00000424527 POLA2Q14181 598 aa12.48□□□□□ -0.41
PCCA-205ENST00000424527 MYCNP04198 464 aaPredicted RBP12.44□□□□□ -0.42
PCCA-205ENST00000424527 SP7Q8TDD2 431 aaPredicted RBP12.37□□□□□ -0.43
PCCA-205ENST00000424527 AKT1S1Q96B36 256 aa12.36□□□□□ -0.43
PCCA-205ENST00000424527 ZBTB12Q9Y330 459 aaPredicted RBP12.28□□□□□ -0.44
PCCA-205ENST00000424527 REM2Q8IYK8 340 aaPredicted RBP12.2□□□□□ -0.46
PCCA-205ENST00000424527 PIP4P2Q8N4L2 257 aa12.19□□□□□ -0.46
PCCA-205ENST00000424527 SLC4A1APQ9BWU0 796 aaKnown RBP12.13□□□□□ -0.47
PCCA-205ENST00000424527 ATF5Q9Y2D1 282 aaPredicted RBP12.11□□□□□ -0.47
PCCA-205ENST00000424527 FXR2P51116 673 aaKnown RBP eCLIP12.09□□□□□ -0.47
PCCA-205ENST00000424527 HAX1O00165 279 aa12.08□□□□□ -0.48
PCCA-205ENST00000424527 FOXD4L1Q9NU39 408 aa12.07□□□□□ -0.48
PCCA-205ENST00000424527 OSCARQ8IYS5 282 aa12.06□□□□□ -0.48
PCCA-205ENST00000424527 PITPNM1O00562 1244 aa12.05□□□□□ -0.48
PCCA-205ENST00000424527 EVX2Q03828 476 aa11.86□□□□□ -0.51
PCCA-205ENST00000424527 SPDYE2BA6NHP3 402 aa11.84□□□□□ -0.51
PCCA-205ENST00000424527 SPDYE6P0CI01 402 aa11.84□□□□□ -0.51
PCCA-205ENST00000424527 SPDYE2Q495Y8 402 aa11.84□□□□□ -0.51
PCCA-205ENST00000424527 ATXN8OSP0DMR3 200 aa11.81□□□□□ -0.52
PCCA-205ENST00000424527 ZBTB22O15209 634 aa11.8□□□□□ -0.52
PCCA-205ENST00000424527 FBLN2P98095 1184 aa11.75□□□□□ -0.53
PCCA-205ENST00000424527 PRKAR2AP13861 404 aaKnown RBP11.74□□□□□ -0.53
PCCA-205ENST00000424527 SPDYE1Q8NFV5 336 aaPredicted RBP11.73□□□□□ -0.53
PCCA-205ENST00000424527 C19orf67A6NJJ6 358 aa11.71□□□□□ -0.53
PCCA-205ENST00000424527 CLEC11AQ9Y240 323 aa11.66□□□□□ -0.54
PCCA-205ENST00000424527 GABBR2O75899 941 aa11.62□□□□□ -0.55
PCCA-205ENST00000424527 SSUH2Q9Y2M2 353 aa11.61□□□□□ -0.55
PCCA-205ENST00000424527 LHX8Q68G74 356 aa11.6□□□□□ -0.55
PCCA-205ENST00000424527 ZNF692Q9BU19 519 aaPredicted RBP11.59□□□□□ -0.55
PCCA-205ENST00000424527 MKRN4PQ13434 485 aaPredicted RBP11.55□□□□□ -0.56
PCCA-205ENST00000424527 CHADLQ6NUI6 762 aa11.46□□□□□ -0.57
PCCA-205ENST00000424527 PRR29P0C7W0 189 aa11.45□□□□□ -0.58
PCCA-205ENST00000424527 CLCN6P51797 869 aa11.43□□□□□ -0.58
PCCA-205ENST00000424527 PABPN1Q86U42 306 aaKnown RBP eCLIP11.38□□□□□ -0.59
PCCA-205ENST00000424527 POTEIP0CG38 1075 aa11.35□□□□□ -0.59
PCCA-205ENST00000424527 CD44P16070 742 aaKnown RBP11.34□□□□□ -0.59
PCCA-205ENST00000424527 FARP1Q9Y4F1 1045 aaPredicted RBP11.32□□□□□ -0.6
PCCA-205ENST00000424527 DCBLD2Q96PD2 775 aa11.22□□□□□ -0.61
PCCA-205ENST00000424527 ZNF579Q8NAF0 562 aaKnown RBP11.18□□□□□ -0.62
PCCA-205ENST00000424527 CSRNP3Q8WYN3 585 aa11.17□□□□□ -0.62
PCCA-205ENST00000424527 PLSCR2Q9NRY7 297 aa11.14□□□□□ -0.63
PCCA-205ENST00000424527 ZRANB1Q9UGI0 708 aa11.11□□□□□ -0.63
PCCA-205ENST00000424527 STAG3Q9UJ98 1225 aa11.07□□□□□ -0.64
PCCA-205ENST00000424527 CREBZFQ9NS37 354 aa11.05□□□□□ -0.64
PCCA-205ENST00000424527 OTUD5Q96G74 571 aa11.03□□□□□ -0.64
PCCA-205ENST00000424527 GALR2O43603 387 aaPredicted RBP11.02□□□□□ -0.65
PCCA-205ENST00000424527 PAK3O75914 559 aaPredicted RBP10.97□□□□□ -0.65
PCCA-205ENST00000424527 EHMT2Q96KQ7 1210 aa10.97□□□□□ -0.65
PCCA-205ENST00000424527 POTEB2H3BUK9 544 aa10.95□□□□□ -0.66
PCCA-205ENST00000424527 POTEMA6NI47 508 aa10.92□□□□□ -0.66
PCCA-205ENST00000424527 NPM1P06748 294 aaKnown RBP eCLIP10.89□□□□□ -0.67
PCCA-205ENST00000424527 PCDH10Q9P2E7 1040 aa10.89□□□□□ -0.67
PCCA-205ENST00000424527 POTEGQ6S5H5 508 aa10.87□□□□□ -0.67
PCCA-205ENST00000424527 PHF12Q96QT6 1004 aa10.87□□□□□ -0.67
PCCA-205ENST00000424527 PELP1Q8IZL8 1130 aaKnown RBP10.84□□□□□ -0.67
PCCA-205ENST00000424527 MNX1P50219 401 aaPredicted RBP10.82□□□□□ -0.68
PCCA-205ENST00000424527 ASTLQ6HA08 431 aaPredicted RBP10.82□□□□□ -0.68
PCCA-205ENST00000424527 C7P10643 843 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms