RNA–Protein interactions for RNA: ENST00000424088.1

C4BPA-203, Transcript of complement component 4 binding protein alpha, humanhuman

TSL 4

Gene C4BPA, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4BPA-203ENST00000424088 AEBP2Q6ZN18 517 aaPredicted RBP11.23□□□□□ -0.61
C4BPA-203ENST00000424088 CHIC1Q5VXU3 224 aa10.82□□□□□ -0.68
C4BPA-203ENST00000424088 SENP3Q9H4L4 574 aaPredicted RBP9.6□□□□□ -0.87
C4BPA-203ENST00000424088 PHF23Q9BUL5 403 aaPredicted RBP9.5□□□□□ -0.89
C4BPA-203ENST00000424088 POTEDQ86YR6 584 aa9.13□□□□□ -0.95
C4BPA-203ENST00000424088 FOXD1Q16676 465 aa8.91□□□□□ -0.98
C4BPA-203ENST00000424088 PLPPR3Q6T4P5 718 aa8.74□□□□□ -1.01
C4BPA-203ENST00000424088 PPP6R1Q9UPN7 881 aa8.44□□□□□ -1.06
C4BPA-203ENST00000424088 ADRA2BP18089 450 aa8.43□□□□□ -1.06
C4BPA-203ENST00000424088 PIAS4Q8N2W9 510 aaPredicted RBP8.37□□□□□ -1.07
C4BPA-203ENST00000424088 MSH5O43196 834 aa8.32□□□□□ -1.08
C4BPA-203ENST00000424088 SCAF1Q9H7N4 1312 aaKnown RBP7.78□□□□□ -1.16
C4BPA-203ENST00000424088 MAPK8IP2Q13387 824 aaPredicted RBP7.7□□□□□ -1.18
C4BPA-203ENST00000424088 PPP4R3CPQ6ZMV5 832 aa7.66□□□□□ -1.18
C4BPA-203ENST00000424088 DMRT2Q9Y5R5 561 aa7.62□□□□□ -1.19
C4BPA-203ENST00000424088 CACNB1Q02641 598 aaPredicted RBP7.57□□□□□ -1.2
C4BPA-203ENST00000424088 CNKSR2Q8WXI2 1034 aa7.5□□□□□ -1.21
C4BPA-203ENST00000424088 NCBP3Q53F19 620 aaKnown RBP7.45□□□□□ -1.22
C4BPA-203ENST00000424088 HOXD11P31277 338 aaPredicted RBP7.39□□□□□ -1.23
C4BPA-203ENST00000424088 RNF216Q9NWF9 866 aaPredicted RBP7.39□□□□□ -1.23
C4BPA-203ENST00000424088 DCAF8L1A6NGE4 600 aa7.35□□□□□ -1.23
C4BPA-203ENST00000424088 NPM3O75607 178 aaKnown RBP7.28□□□□□ -1.24
C4BPA-203ENST00000424088 KCNA4P22459 653 aa7.26□□□□□ -1.25
C4BPA-203ENST00000424088 DNAJC5BQ9UF47 199 aa7.13□□□□□ -1.27
C4BPA-203ENST00000424088 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.09□□□□□ -1.27
C4BPA-203ENST00000424088 RNF39Q9H2S5 420 aa7.09□□□□□ -1.27
C4BPA-203ENST00000424088 POTEHQ6S545 545 aa7.06□□□□□ -1.28
C4BPA-203ENST00000424088 C1QBPQ07021 282 aaKnown RBP7.02□□□□□ -1.29
C4BPA-203ENST00000424088 SLC4A2P04920 1241 aa6.91□□□□□ -1.3
C4BPA-203ENST00000424088 SLC4A1APQ9BWU0 796 aaKnown RBP6.91□□□□□ -1.3
C4BPA-203ENST00000424088 U3KPZ7 1027 aaPredicted RBP6.9□□□□□ -1.3
C4BPA-203ENST00000424088 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.82□□□□□ -1.32
C4BPA-203ENST00000424088 HNRNPUL2Q1KMD3 747 aaKnown RBP6.82□□□□□ -1.32
C4BPA-203ENST00000424088 CAPN15O75808 1086 aa6.79□□□□□ -1.32
C4BPA-203ENST00000424088 APLP2Q06481 763 aa6.79□□□□□ -1.32
C4BPA-203ENST00000424088 SAMD1Q6SPF0 538 aaPredicted RBP6.76□□□□□ -1.33
C4BPA-203ENST00000424088 SPINK5Q9NQ38 1064 aaPredicted RBP6.76□□□□□ -1.33
C4BPA-203ENST00000424088 MYCNP04198 464 aaPredicted RBP6.75□□□□□ -1.33
C4BPA-203ENST00000424088 FOXD4L1Q9NU39 408 aa6.75□□□□□ -1.33
C4BPA-203ENST00000424088 TRHP20396 242 aaPredicted RBP6.71□□□□□ -1.34
C4BPA-203ENST00000424088 DSG3P32926 999 aa6.69□□□□□ -1.34
C4BPA-203ENST00000424088 ZNF219Q9P2Y4 722 aaPredicted RBP6.69□□□□□ -1.34
C4BPA-203ENST00000424088 ZBTB22O15209 634 aa6.65□□□□□ -1.34
C4BPA-203ENST00000424088 ABCB7O75027 752 aa6.61□□□□□ -1.35
C4BPA-203ENST00000424088 POLA2Q14181 598 aa6.57□□□□□ -1.36
C4BPA-203ENST00000424088 ATF5Q9Y2D1 282 aaPredicted RBP6.56□□□□□ -1.36
C4BPA-203ENST00000424088 ATXN8OSP0DMR3 200 aa6.55□□□□□ -1.36
C4BPA-203ENST00000424088 EHMT2Q96KQ7 1210 aa6.5□□□□□ -1.37
C4BPA-203ENST00000424088 CSRNP3Q8WYN3 585 aa6.49□□□□□ -1.37
C4BPA-203ENST00000424088 ZBTB12Q9Y330 459 aaPredicted RBP6.44□□□□□ -1.38
C4BPA-203ENST00000424088 RBM42Q9BTD8 480 aaKnown RBP6.4□□□□□ -1.38
C4BPA-203ENST00000424088 FBLN2P98095 1184 aa6.35□□□□□ -1.39
C4BPA-203ENST00000424088 OSCARQ8IYS5 282 aa6.3□□□□□ -1.4
C4BPA-203ENST00000424088 SP7Q8TDD2 431 aaPredicted RBP6.3□□□□□ -1.4
C4BPA-203ENST00000424088 AKT1S1Q96B36 256 aa6.28□□□□□ -1.4
C4BPA-203ENST00000424088 PLSCR2Q9NRY7 297 aa6.28□□□□□ -1.4
C4BPA-203ENST00000424088 MKRN4PQ13434 485 aaPredicted RBP6.25□□□□□ -1.41
C4BPA-203ENST00000424088 SPDYE2BA6NHP3 402 aa6.24□□□□□ -1.41
C4BPA-203ENST00000424088 SPDYE6P0CI01 402 aa6.24□□□□□ -1.41
C4BPA-203ENST00000424088 SPDYE2Q495Y8 402 aa6.24□□□□□ -1.41
C4BPA-203ENST00000424088 REM2Q8IYK8 340 aaPredicted RBP6.22□□□□□ -1.41
C4BPA-203ENST00000424088 ZNF692Q9BU19 519 aaPredicted RBP6.22□□□□□ -1.41
C4BPA-203ENST00000424088 CHRDL2Q6WN34 429 aa6.19□□□□□ -1.42
C4BPA-203ENST00000424088 SSUH2Q9Y2M2 353 aa6.14□□□□□ -1.43
C4BPA-203ENST00000424088 PITPNM1O00562 1244 aa6.12□□□□□ -1.43
C4BPA-203ENST00000424088 PABPN1Q86U42 306 aaKnown RBP eCLIP6.11□□□□□ -1.43
C4BPA-203ENST00000424088 SPDYE1Q8NFV5 336 aaPredicted RBP6.11□□□□□ -1.43
C4BPA-203ENST00000424088 CLEC11AQ9Y240 323 aa6.1□□□□□ -1.43
C4BPA-203ENST00000424088 SPDYE4A6NLX3 237 aa6.08□□□□□ -1.44
C4BPA-203ENST00000424088 HAX1O00165 279 aa6.07□□□□□ -1.44
C4BPA-203ENST00000424088 PIP4P2Q8N4L2 257 aa6.07□□□□□ -1.44
C4BPA-203ENST00000424088 FXR2P51116 673 aaKnown RBP eCLIP6.06□□□□□ -1.44
C4BPA-203ENST00000424088 PRR29P0C7W0 189 aa6.03□□□□□ -1.44
C4BPA-203ENST00000424088 STAG3Q9UJ98 1225 aa6□□□□□ -1.45
C4BPA-203ENST00000424088 PRKAR2AP13861 404 aaKnown RBP5.99□□□□□ -1.45
C4BPA-203ENST00000424088 CHADLQ6NUI6 762 aa5.94□□□□□ -1.46
C4BPA-203ENST00000424088 LHX8Q68G74 356 aa5.93□□□□□ -1.46
C4BPA-203ENST00000424088 FKBP8Q14318 412 aa5.9□□□□□ -1.46
C4BPA-203ENST00000424088 PROM2Q8N271 834 aa5.9□□□□□ -1.46
C4BPA-203ENST00000424088 FARP1Q9Y4F1 1045 aaPredicted RBP5.88□□□□□ -1.47
C4BPA-203ENST00000424088 CREBZFQ9NS37 354 aa5.87□□□□□ -1.47
C4BPA-203ENST00000424088 C19orf67A6NJJ6 358 aa5.86□□□□□ -1.47
C4BPA-203ENST00000424088 EVX2Q03828 476 aa5.85□□□□□ -1.47
C4BPA-203ENST00000424088 PLEKHG5O94827 1062 aa5.82□□□□□ -1.48
C4BPA-203ENST00000424088 NPM1P06748 294 aaKnown RBP eCLIP5.82□□□□□ -1.48
C4BPA-203ENST00000424088 MIER1Q8N108 512 aa5.82□□□□□ -1.48
C4BPA-203ENST00000424088 CD44P16070 742 aaKnown RBP5.81□□□□□ -1.48
C4BPA-203ENST00000424088 PLCD3Q8N3E9 789 aa5.78□□□□□ -1.48
C4BPA-203ENST00000424088 FBXO3Q9UK99 471 aa5.78□□□□□ -1.48
C4BPA-203ENST00000424088 PAK3O75914 559 aaPredicted RBP5.76□□□□□ -1.49
C4BPA-203ENST00000424088 MNX1P50219 401 aaPredicted RBP5.76□□□□□ -1.49
C4BPA-203ENST00000424088 ZRANB1Q9UGI0 708 aa5.76□□□□□ -1.49
C4BPA-203ENST00000424088 GABBR2O75899 941 aa5.75□□□□□ -1.49
C4BPA-203ENST00000424088 CLCN6P51797 869 aa5.75□□□□□ -1.49
C4BPA-203ENST00000424088 ZBTB47Q9UFB7 747 aaPredicted RBP5.73□□□□□ -1.49
C4BPA-203ENST00000424088 ZNF579Q8NAF0 562 aaKnown RBP5.7□□□□□ -1.5
C4BPA-203ENST00000424088 TSPYL2Q9H2G4 693 aaPredicted RBP5.7□□□□□ -1.5
C4BPA-203ENST00000424088 VASPP50552 380 aaPredicted RBP5.66□□□□□ -1.5
C4BPA-203ENST00000424088 KLHL34Q8N239 644 aa5.66□□□□□ -1.5
C4BPA-203ENST00000424088 DCBLD2Q96PD2 775 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms