RNA–Protein interactions for RNA: ENST00000423735.2

LAMA4-206, Transcript of laminin subunit alpha 4, humanhuman

TSL 5

Gene LAMA4, Length 331 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-206ENST00000423735 CHIC1Q5VXU3 224 aa20.81■□□□□ 0.92
LAMA4-206ENST00000423735 AEBP2Q6ZN18 517 aaPredicted RBP20.7■□□□□ 0.9
LAMA4-206ENST00000423735 PHF23Q9BUL5 403 aaPredicted RBP18.29■□□□□ 0.52
LAMA4-206ENST00000423735 SENP3Q9H4L4 574 aaPredicted RBP17.6■□□□□ 0.41
LAMA4-206ENST00000423735 PLPPR3Q6T4P5 718 aa17.21■□□□□ 0.35
LAMA4-206ENST00000423735 FOXD1Q16676 465 aa16.19■□□□□ 0.18
LAMA4-206ENST00000423735 ADRA2BP18089 450 aa16.05■□□□□ 0.16
LAMA4-206ENST00000423735 PPP6R1Q9UPN7 881 aa15.96■□□□□ 0.15
LAMA4-206ENST00000423735 PIAS4Q8N2W9 510 aaPredicted RBP15.5■□□□□ 0.07
LAMA4-206ENST00000423735 KCNA4P22459 653 aa15.45■□□□□ 0.06
LAMA4-206ENST00000423735 PPP4R3CPQ6ZMV5 832 aa15.2■□□□□ 0.02
LAMA4-206ENST00000423735 EHMT2Q96KQ7 1210 aa15.13■□□□□ 0.01
LAMA4-206ENST00000423735 NCBP3Q53F19 620 aaKnown RBP15.06■□□□□ 0
LAMA4-206ENST00000423735 SLC4A1APQ9BWU0 796 aaKnown RBP14.89□□□□□ -0.03
LAMA4-206ENST00000423735 MSH5O43196 834 aa14.81□□□□□ -0.04
LAMA4-206ENST00000423735 SCAF1Q9H7N4 1312 aaKnown RBP14.79□□□□□ -0.04
LAMA4-206ENST00000423735 NPM3O75607 178 aaKnown RBP14.72□□□□□ -0.05
LAMA4-206ENST00000423735 CNKSR2Q8WXI2 1034 aa14.67□□□□□ -0.06
LAMA4-206ENST00000423735 CSRNP3Q8WYN3 585 aa14.56□□□□□ -0.08
LAMA4-206ENST00000423735 MAPK8IP2Q13387 824 aaPredicted RBP14.37□□□□□ -0.11
LAMA4-206ENST00000423735 RNF216Q9NWF9 866 aaPredicted RBP14.23□□□□□ -0.13
LAMA4-206ENST00000423735 ZBTB22O15209 634 aa14.16□□□□□ -0.14
LAMA4-206ENST00000423735 DNAJC5BQ9UF47 199 aa14.12□□□□□ -0.15
LAMA4-206ENST00000423735 FOXD4L1Q9NU39 408 aa14.11□□□□□ -0.15
LAMA4-206ENST00000423735 DMRT2Q9Y5R5 561 aa14.09□□□□□ -0.15
LAMA4-206ENST00000423735 HOXD11P31277 338 aaPredicted RBP13.98□□□□□ -0.17
LAMA4-206ENST00000423735 SLC4A2P04920 1241 aa13.71□□□□□ -0.21
LAMA4-206ENST00000423735 MYCNP04198 464 aaPredicted RBP13.66□□□□□ -0.22
LAMA4-206ENST00000423735 DCAF8L1A6NGE4 600 aa13.61□□□□□ -0.23
LAMA4-206ENST00000423735 ATXN8OSP0DMR3 200 aa13.55□□□□□ -0.24
LAMA4-206ENST00000423735 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.47□□□□□ -0.25
LAMA4-206ENST00000423735 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.34□□□□□ -0.27
LAMA4-206ENST00000423735 HNRNPUL2Q1KMD3 747 aaKnown RBP13.34□□□□□ -0.27
LAMA4-206ENST00000423735 SAMD1Q6SPF0 538 aaPredicted RBP13.29□□□□□ -0.28
LAMA4-206ENST00000423735 FKBP8Q14318 412 aa13.24□□□□□ -0.29
LAMA4-206ENST00000423735 U3KPZ7 1027 aaPredicted RBP13.19□□□□□ -0.3
LAMA4-206ENST00000423735 ATF5Q9Y2D1 282 aaPredicted RBP13.14□□□□□ -0.31
LAMA4-206ENST00000423735 APLP2Q06481 763 aa13.12□□□□□ -0.31
LAMA4-206ENST00000423735 AMER1Q5JTC6 1135 aaPredicted RBP13.05□□□□□ -0.32
LAMA4-206ENST00000423735 ZNF219Q9P2Y4 722 aaPredicted RBP12.96□□□□□ -0.33
LAMA4-206ENST00000423735 RTN4Q9NQC3 1192 aaKnown RBP12.95□□□□□ -0.34
LAMA4-206ENST00000423735 TRHP20396 242 aaPredicted RBP12.77□□□□□ -0.37
LAMA4-206ENST00000423735 FBLN2P98095 1184 aa12.73□□□□□ -0.37
LAMA4-206ENST00000423735 CAPN15O75808 1086 aa12.71□□□□□ -0.37
LAMA4-206ENST00000423735 SPDYE4A6NLX3 237 aa12.69□□□□□ -0.38
LAMA4-206ENST00000423735 SLC24A1O60721 1099 aa12.67□□□□□ -0.38
LAMA4-206ENST00000423735 RNF39Q9H2S5 420 aa12.67□□□□□ -0.38
LAMA4-206ENST00000423735 SPINK5Q9NQ38 1064 aaPredicted RBP12.67□□□□□ -0.38
LAMA4-206ENST00000423735 FBXO3Q9UK99 471 aa12.66□□□□□ -0.38
LAMA4-206ENST00000423735 POLA2Q14181 598 aa12.63□□□□□ -0.39
LAMA4-206ENST00000423735 C1QBPQ07021 282 aaKnown RBP12.6□□□□□ -0.39
LAMA4-206ENST00000423735 MKRN4PQ13434 485 aaPredicted RBP12.6□□□□□ -0.39
LAMA4-206ENST00000423735 ZBTB12Q9Y330 459 aaPredicted RBP12.54□□□□□ -0.4
LAMA4-206ENST00000423735 ABCB7O75027 752 aa12.48□□□□□ -0.41
LAMA4-206ENST00000423735 POTEDQ86YR6 584 aa12.46□□□□□ -0.41
LAMA4-206ENST00000423735 PROM2Q8N271 834 aa12.43□□□□□ -0.42
LAMA4-206ENST00000423735 VASPP50552 380 aaPredicted RBP12.41□□□□□ -0.42
LAMA4-206ENST00000423735 DSG3P32926 999 aa12.25□□□□□ -0.45
LAMA4-206ENST00000423735 ZNF692Q9BU19 519 aaPredicted RBP12.25□□□□□ -0.45
LAMA4-206ENST00000423735 IFNLR1Q8IU57 520 aaPredicted RBP12.22□□□□□ -0.45
LAMA4-206ENST00000423735 DCAF8L2P0C7V8 631 aa12.21□□□□□ -0.45
LAMA4-206ENST00000423735 SPDYE2BA6NHP3 402 aa12.19□□□□□ -0.46
LAMA4-206ENST00000423735 SPDYE6P0CI01 402 aa12.19□□□□□ -0.46
LAMA4-206ENST00000423735 SPDYE2Q495Y8 402 aa12.19□□□□□ -0.46
LAMA4-206ENST00000423735 OSCARQ8IYS5 282 aa12.19□□□□□ -0.46
LAMA4-206ENST00000423735 KLHL34Q8N239 644 aa12.18□□□□□ -0.46
LAMA4-206ENST00000423735 STAG3Q9UJ98 1225 aa12.14□□□□□ -0.47
LAMA4-206ENST00000423735 PLCD3Q8N3E9 789 aa12.1□□□□□ -0.47
LAMA4-206ENST00000423735 PABPN1Q86U42 306 aaKnown RBP eCLIP12.09□□□□□ -0.47
LAMA4-206ENST00000423735 SSUH2Q9Y2M2 353 aa12.09□□□□□ -0.47
LAMA4-206ENST00000423735 SPOCK2Q92563 424 aa12.08□□□□□ -0.48
LAMA4-206ENST00000423735 CACNB1Q02641 598 aaPredicted RBP12.05□□□□□ -0.48
LAMA4-206ENST00000423735 PLEKHG5O94827 1062 aa12.02□□□□□ -0.49
LAMA4-206ENST00000423735 MIER1Q8N108 512 aa12.02□□□□□ -0.49
LAMA4-206ENST00000423735 PLCB2Q00722 1185 aa12.01□□□□□ -0.49
LAMA4-206ENST00000423735 PKD2Q13563 968 aa12.01□□□□□ -0.49
LAMA4-206ENST00000423735 ECM2O94769 699 aaPredicted RBP11.96□□□□□ -0.49
LAMA4-206ENST00000423735 ZBTB47Q9UFB7 747 aaPredicted RBP11.93□□□□□ -0.5
LAMA4-206ENST00000423735 HAP1P54257 671 aaPredicted RBP11.92□□□□□ -0.5
LAMA4-206ENST00000423735 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.85□□□□□ -0.51
LAMA4-206ENST00000423735 CIZ1Q9ULV3 898 aaPredicted RBP11.85□□□□□ -0.51
LAMA4-206ENST00000423735 BBXQ8WY36 941 aaPredicted RBP11.78□□□□□ -0.52
LAMA4-206ENST00000423735 RBM42Q9BTD8 480 aaKnown RBP11.77□□□□□ -0.53
LAMA4-206ENST00000423735 RGL2O15211 777 aa11.75□□□□□ -0.53
LAMA4-206ENST00000423735 SPDYE1Q8NFV5 336 aaPredicted RBP11.73□□□□□ -0.53
LAMA4-206ENST00000423735 TRIM41Q8WV44 630 aa11.72□□□□□ -0.53
LAMA4-206ENST00000423735 PAXIP1Q6ZW49 1069 aaPredicted RBP11.71□□□□□ -0.53
LAMA4-206ENST00000423735 CFAP44Q96MT7 982 aa11.71□□□□□ -0.53
LAMA4-206ENST00000423735 AKT1S1Q96B36 256 aa11.69□□□□□ -0.54
LAMA4-206ENST00000423735 CLEC11AQ9Y240 323 aa11.69□□□□□ -0.54
LAMA4-206ENST00000423735 GSE1Q14687 1217 aa11.67□□□□□ -0.54
LAMA4-206ENST00000423735 VSIG10Q8N0Z9 540 aa11.67□□□□□ -0.54
LAMA4-206ENST00000423735 NPM1P06748 294 aaKnown RBP eCLIP11.66□□□□□ -0.54
LAMA4-206ENST00000423735 CHGAP10645 457 aaKnown RBP11.66□□□□□ -0.54
LAMA4-206ENST00000423735 PRR29P0C7W0 189 aa11.64□□□□□ -0.55
LAMA4-206ENST00000423735 SPRYD3Q8NCJ5 442 aa11.62□□□□□ -0.55
LAMA4-206ENST00000423735 DCAF8Q5TAQ9 597 aa11.6□□□□□ -0.55
LAMA4-206ENST00000423735 BCANQ96GW7 911 aa11.59□□□□□ -0.55
LAMA4-206ENST00000423735 TAOK2Q9UL54 1235 aa11.58□□□□□ -0.56
LAMA4-206ENST00000423735 FAM212AQ96EL1 285 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms