RNA–Protein interactions for RNA: ENST00000422596.1

TRDN-203, Transcript of triadin, humanhuman

TSL 3

Gene TRDN, Length 776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRDN-203ENST00000422596 AEBP2Q6ZN18 517 aaPredicted RBP23.18■■□□□ 1.3
TRDN-203ENST00000422596 CHIC1Q5VXU3 224 aa22.13■■□□□ 1.13
TRDN-203ENST00000422596 SENP3Q9H4L4 574 aaPredicted RBP19.64■□□□□ 0.73
TRDN-203ENST00000422596 PHF23Q9BUL5 403 aaPredicted RBP19.47■□□□□ 0.71
TRDN-203ENST00000422596 FOXD1Q16676 465 aa18.35■□□□□ 0.53
TRDN-203ENST00000422596 PLPPR3Q6T4P5 718 aa17.73■□□□□ 0.43
TRDN-203ENST00000422596 PPP6R1Q9UPN7 881 aa17.35■□□□□ 0.37
TRDN-203ENST00000422596 ADRA2BP18089 450 aa17.3■□□□□ 0.36
TRDN-203ENST00000422596 PIAS4Q8N2W9 510 aaPredicted RBP17.17■□□□□ 0.34
TRDN-203ENST00000422596 MSH5O43196 834 aa17.02■□□□□ 0.32
TRDN-203ENST00000422596 POTEDQ86YR6 584 aa16.37■□□□□ 0.21
TRDN-203ENST00000422596 MAPK8IP2Q13387 824 aaPredicted RBP15.85■□□□□ 0.13
TRDN-203ENST00000422596 SCAF1Q9H7N4 1312 aaKnown RBP15.7■□□□□ 0.1
TRDN-203ENST00000422596 DMRT2Q9Y5R5 561 aa15.64■□□□□ 0.09
TRDN-203ENST00000422596 PPP4R3CPQ6ZMV5 832 aa15.61■□□□□ 0.09
TRDN-203ENST00000422596 CNKSR2Q8WXI2 1034 aa15.24■□□□□ 0.03
TRDN-203ENST00000422596 HOXD11P31277 338 aaPredicted RBP15.12■□□□□ 0.01
TRDN-203ENST00000422596 RNF216Q9NWF9 866 aaPredicted RBP15.05■□□□□ -0
TRDN-203ENST00000422596 DCAF8L1A6NGE4 600 aa15□□□□□ -0.01
TRDN-203ENST00000422596 NCBP3Q53F19 620 aaKnown RBP15□□□□□ -0.01
TRDN-203ENST00000422596 NPM3O75607 178 aaKnown RBP14.86□□□□□ -0.03
TRDN-203ENST00000422596 KCNA4P22459 653 aa14.76□□□□□ -0.05
TRDN-203ENST00000422596 RNF39Q9H2S5 420 aa14.59□□□□□ -0.07
TRDN-203ENST00000422596 CACNB1Q02641 598 aaPredicted RBP14.54□□□□□ -0.08
TRDN-203ENST00000422596 DNAJC5BQ9UF47 199 aa14.5□□□□□ -0.09
TRDN-203ENST00000422596 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.42□□□□□ -0.1
TRDN-203ENST00000422596 C1QBPQ07021 282 aaKnown RBP14.35□□□□□ -0.11
TRDN-203ENST00000422596 U3KPZ7 1027 aaPredicted RBP14.17□□□□□ -0.14
TRDN-203ENST00000422596 SLC4A2P04920 1241 aa14.16□□□□□ -0.14
TRDN-203ENST00000422596 SLC4A1APQ9BWU0 796 aaKnown RBP13.94□□□□□ -0.18
TRDN-203ENST00000422596 SPINK5Q9NQ38 1064 aaPredicted RBP13.93□□□□□ -0.18
TRDN-203ENST00000422596 CAPN15O75808 1086 aa13.85□□□□□ -0.19
TRDN-203ENST00000422596 DSG3P32926 999 aa13.74□□□□□ -0.21
TRDN-203ENST00000422596 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.73□□□□□ -0.21
TRDN-203ENST00000422596 HNRNPUL2Q1KMD3 747 aaKnown RBP13.73□□□□□ -0.21
TRDN-203ENST00000422596 MYCNP04198 464 aaPredicted RBP13.69□□□□□ -0.22
TRDN-203ENST00000422596 TRHP20396 242 aaPredicted RBP13.69□□□□□ -0.22
TRDN-203ENST00000422596 SAMD1Q6SPF0 538 aaPredicted RBP13.68□□□□□ -0.22
TRDN-203ENST00000422596 APLP2Q06481 763 aa13.66□□□□□ -0.22
TRDN-203ENST00000422596 FOXD4L1Q9NU39 408 aa13.66□□□□□ -0.22
TRDN-203ENST00000422596 ZBTB22O15209 634 aa13.61□□□□□ -0.23
TRDN-203ENST00000422596 ZNF219Q9P2Y4 722 aaPredicted RBP13.6□□□□□ -0.23
TRDN-203ENST00000422596 ABCB7O75027 752 aa13.59□□□□□ -0.23
TRDN-203ENST00000422596 ATF5Q9Y2D1 282 aaPredicted RBP13.46□□□□□ -0.25
TRDN-203ENST00000422596 POLA2Q14181 598 aa13.37□□□□□ -0.27
TRDN-203ENST00000422596 ATXN8OSP0DMR3 200 aa13.19□□□□□ -0.3
TRDN-203ENST00000422596 CSRNP3Q8WYN3 585 aa13.13□□□□□ -0.31
TRDN-203ENST00000422596 EHMT2Q96KQ7 1210 aa13.06□□□□□ -0.32
TRDN-203ENST00000422596 RBM42Q9BTD8 480 aaKnown RBP13.03□□□□□ -0.32
TRDN-203ENST00000422596 ZBTB12Q9Y330 459 aaPredicted RBP13.02□□□□□ -0.33
TRDN-203ENST00000422596 OSCARQ8IYS5 282 aa12.94□□□□□ -0.34
TRDN-203ENST00000422596 POTEHQ6S545 545 aa12.86□□□□□ -0.35
TRDN-203ENST00000422596 MKRN4PQ13434 485 aaPredicted RBP12.83□□□□□ -0.36
TRDN-203ENST00000422596 FBLN2P98095 1184 aa12.81□□□□□ -0.36
TRDN-203ENST00000422596 AKT1S1Q96B36 256 aa12.8□□□□□ -0.36
TRDN-203ENST00000422596 CHRDL2Q6WN34 429 aa12.73□□□□□ -0.37
TRDN-203ENST00000422596 REM2Q8IYK8 340 aaPredicted RBP12.72□□□□□ -0.37
TRDN-203ENST00000422596 SPDYE2BA6NHP3 402 aa12.67□□□□□ -0.38
TRDN-203ENST00000422596 SPDYE6P0CI01 402 aa12.67□□□□□ -0.38
TRDN-203ENST00000422596 SPDYE2Q495Y8 402 aa12.67□□□□□ -0.38
TRDN-203ENST00000422596 PITPNM1O00562 1244 aa12.59□□□□□ -0.39
TRDN-203ENST00000422596 ZNF692Q9BU19 519 aaPredicted RBP12.58□□□□□ -0.4
TRDN-203ENST00000422596 SSUH2Q9Y2M2 353 aa12.54□□□□□ -0.4
TRDN-203ENST00000422596 PIP4P2Q8N4L2 257 aa12.49□□□□□ -0.41
TRDN-203ENST00000422596 FXR2P51116 673 aaKnown RBP eCLIP12.42□□□□□ -0.42
TRDN-203ENST00000422596 PABPN1Q86U42 306 aaKnown RBP eCLIP12.42□□□□□ -0.42
TRDN-203ENST00000422596 CLEC11AQ9Y240 323 aa12.42□□□□□ -0.42
TRDN-203ENST00000422596 SPDYE1Q8NFV5 336 aaPredicted RBP12.4□□□□□ -0.42
TRDN-203ENST00000422596 SPDYE4A6NLX3 237 aa12.28□□□□□ -0.44
TRDN-203ENST00000422596 PRKAR2AP13861 404 aaKnown RBP12.26□□□□□ -0.45
TRDN-203ENST00000422596 PRR29P0C7W0 189 aa12.22□□□□□ -0.45
TRDN-203ENST00000422596 HAX1O00165 279 aa12.2□□□□□ -0.46
TRDN-203ENST00000422596 CHADLQ6NUI6 762 aa12.19□□□□□ -0.46
TRDN-203ENST00000422596 EVX2Q03828 476 aa12.13□□□□□ -0.47
TRDN-203ENST00000422596 SP7Q8TDD2 431 aaPredicted RBP12.13□□□□□ -0.47
TRDN-203ENST00000422596 STAG3Q9UJ98 1225 aa12.03□□□□□ -0.48
TRDN-203ENST00000422596 C19orf67A6NJJ6 358 aa12.02□□□□□ -0.49
TRDN-203ENST00000422596 FARP1Q9Y4F1 1045 aaPredicted RBP12□□□□□ -0.49
TRDN-203ENST00000422596 PROM2Q8N271 834 aa11.99□□□□□ -0.49
TRDN-203ENST00000422596 CREBZFQ9NS37 354 aa11.99□□□□□ -0.49
TRDN-203ENST00000422596 CD44P16070 742 aaKnown RBP11.87□□□□□ -0.51
TRDN-203ENST00000422596 FKBP8Q14318 412 aa11.87□□□□□ -0.51
TRDN-203ENST00000422596 GABBR2O75899 941 aa11.81□□□□□ -0.52
TRDN-203ENST00000422596 MNX1P50219 401 aaPredicted RBP11.81□□□□□ -0.52
TRDN-203ENST00000422596 ZRANB1Q9UGI0 708 aa11.74□□□□□ -0.53
TRDN-203ENST00000422596 NPM1P06748 294 aaKnown RBP eCLIP11.7□□□□□ -0.54
TRDN-203ENST00000422596 MIER1Q8N108 512 aa11.69□□□□□ -0.54
TRDN-203ENST00000422596 ZNF579Q8NAF0 562 aaKnown RBP11.67□□□□□ -0.54
TRDN-203ENST00000422596 PAK3O75914 559 aaPredicted RBP11.62□□□□□ -0.55
TRDN-203ENST00000422596 PHF12Q96QT6 1004 aa11.62□□□□□ -0.55
TRDN-203ENST00000422596 POTEIP0CG38 1075 aa11.6□□□□□ -0.55
TRDN-203ENST00000422596 PLCD3Q8N3E9 789 aa11.6□□□□□ -0.55
TRDN-203ENST00000422596 PLEKHG5O94827 1062 aa11.59□□□□□ -0.55
TRDN-203ENST00000422596 GALR2O43603 387 aaPredicted RBP11.58□□□□□ -0.56
TRDN-203ENST00000422596 CLCN6P51797 869 aa11.57□□□□□ -0.56
TRDN-203ENST00000422596 TSPYL2Q9H2G4 693 aaPredicted RBP11.57□□□□□ -0.56
TRDN-203ENST00000422596 RASEFQ8IZ41 740 aa11.53□□□□□ -0.56
TRDN-203ENST00000422596 DCBLD2Q96PD2 775 aa11.5□□□□□ -0.57
TRDN-203ENST00000422596 FBXO3Q9UK99 471 aa11.5□□□□□ -0.57
TRDN-203ENST00000422596 CCDC61Q9Y6R9 512 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms