RNA–Protein interactions for RNA: ENST00000422492.1

NPHP1-206, Transcript of nephrocystin 1, humanhuman

TSL 3

Gene NPHP1, Length 357 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-206ENST00000422492 AEBP2Q6ZN18 517 aaPredicted RBP20.06■□□□□ 0.8
NPHP1-206ENST00000422492 CHIC1Q5VXU3 224 aa18.96■□□□□ 0.63
NPHP1-206ENST00000422492 SENP3Q9H4L4 574 aaPredicted RBP17.15■□□□□ 0.34
NPHP1-206ENST00000422492 PHF23Q9BUL5 403 aaPredicted RBP16.89■□□□□ 0.29
NPHP1-206ENST00000422492 FOXD1Q16676 465 aa15.98■□□□□ 0.15
NPHP1-206ENST00000422492 PLPPR3Q6T4P5 718 aa15.11■□□□□ 0.01
NPHP1-206ENST00000422492 MSH5O43196 834 aa15.02■□□□□ -0
NPHP1-206ENST00000422492 PIAS4Q8N2W9 510 aaPredicted RBP14.93□□□□□ -0.02
NPHP1-206ENST00000422492 PPP6R1Q9UPN7 881 aa14.83□□□□□ -0.04
NPHP1-206ENST00000422492 POTEDQ86YR6 584 aa14.82□□□□□ -0.04
NPHP1-206ENST00000422492 ADRA2BP18089 450 aa14.8□□□□□ -0.04
NPHP1-206ENST00000422492 MAPK8IP2Q13387 824 aaPredicted RBP13.61□□□□□ -0.23
NPHP1-206ENST00000422492 DMRT2Q9Y5R5 561 aa13.58□□□□□ -0.24
NPHP1-206ENST00000422492 SCAF1Q9H7N4 1312 aaKnown RBP13.55□□□□□ -0.24
NPHP1-206ENST00000422492 PPP4R3CPQ6ZMV5 832 aa13.22□□□□□ -0.29
NPHP1-206ENST00000422492 DCAF8L1A6NGE4 600 aa13.05□□□□□ -0.32
NPHP1-206ENST00000422492 HOXD11P31277 338 aaPredicted RBP13.03□□□□□ -0.32
NPHP1-206ENST00000422492 CNKSR2Q8WXI2 1034 aa13□□□□□ -0.33
NPHP1-206ENST00000422492 CACNB1Q02641 598 aaPredicted RBP12.95□□□□□ -0.34
NPHP1-206ENST00000422492 RNF216Q9NWF9 866 aaPredicted RBP12.9□□□□□ -0.34
NPHP1-206ENST00000422492 RNF39Q9H2S5 420 aa12.78□□□□□ -0.36
NPHP1-206ENST00000422492 NCBP3Q53F19 620 aaKnown RBP12.69□□□□□ -0.38
NPHP1-206ENST00000422492 C1QBPQ07021 282 aaKnown RBP12.59□□□□□ -0.39
NPHP1-206ENST00000422492 DNAJC5BQ9UF47 199 aa12.58□□□□□ -0.4
NPHP1-206ENST00000422492 NPM3O75607 178 aaKnown RBP12.5□□□□□ -0.41
NPHP1-206ENST00000422492 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.42□□□□□ -0.42
NPHP1-206ENST00000422492 KCNA4P22459 653 aa12.17□□□□□ -0.46
NPHP1-206ENST00000422492 U3KPZ7 1027 aaPredicted RBP12.16□□□□□ -0.46
NPHP1-206ENST00000422492 SPINK5Q9NQ38 1064 aaPredicted RBP12.01□□□□□ -0.49
NPHP1-206ENST00000422492 CAPN15O75808 1086 aa12□□□□□ -0.49
NPHP1-206ENST00000422492 SLC4A2P04920 1241 aa11.96□□□□□ -0.49
NPHP1-206ENST00000422492 DSG3P32926 999 aa11.93□□□□□ -0.5
NPHP1-206ENST00000422492 APLP2Q06481 763 aa11.83□□□□□ -0.52
NPHP1-206ENST00000422492 TRHP20396 242 aaPredicted RBP11.78□□□□□ -0.52
NPHP1-206ENST00000422492 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.77□□□□□ -0.53
NPHP1-206ENST00000422492 HNRNPUL2Q1KMD3 747 aaKnown RBP11.77□□□□□ -0.53
NPHP1-206ENST00000422492 ZNF219Q9P2Y4 722 aaPredicted RBP11.77□□□□□ -0.53
NPHP1-206ENST00000422492 ABCB7O75027 752 aa11.72□□□□□ -0.53
NPHP1-206ENST00000422492 SAMD1Q6SPF0 538 aaPredicted RBP11.71□□□□□ -0.53
NPHP1-206ENST00000422492 POTEHQ6S545 545 aa11.6□□□□□ -0.55
NPHP1-206ENST00000422492 MYCNP04198 464 aaPredicted RBP11.58□□□□□ -0.56
NPHP1-206ENST00000422492 SLC4A1APQ9BWU0 796 aaKnown RBP11.48□□□□□ -0.57
NPHP1-206ENST00000422492 RBM42Q9BTD8 480 aaKnown RBP11.42□□□□□ -0.58
NPHP1-206ENST00000422492 POLA2Q14181 598 aa11.41□□□□□ -0.58
NPHP1-206ENST00000422492 FOXD4L1Q9NU39 408 aa11.41□□□□□ -0.58
NPHP1-206ENST00000422492 ATF5Q9Y2D1 282 aaPredicted RBP11.29□□□□□ -0.6
NPHP1-206ENST00000422492 ZBTB12Q9Y330 459 aaPredicted RBP11.22□□□□□ -0.61
NPHP1-206ENST00000422492 CHRDL2Q6WN34 429 aa11.2□□□□□ -0.62
NPHP1-206ENST00000422492 ZBTB22O15209 634 aa11.18□□□□□ -0.62
NPHP1-206ENST00000422492 AKT1S1Q96B36 256 aa11.12□□□□□ -0.63
NPHP1-206ENST00000422492 OSCARQ8IYS5 282 aa11.1□□□□□ -0.63
NPHP1-206ENST00000422492 ATXN8OSP0DMR3 200 aa11.04□□□□□ -0.64
NPHP1-206ENST00000422492 REM2Q8IYK8 340 aaPredicted RBP11.01□□□□□ -0.65
NPHP1-206ENST00000422492 PITPNM1O00562 1244 aa10.91□□□□□ -0.66
NPHP1-206ENST00000422492 PIP4P2Q8N4L2 257 aa10.91□□□□□ -0.66
NPHP1-206ENST00000422492 FBLN2P98095 1184 aa10.9□□□□□ -0.66
NPHP1-206ENST00000422492 SPDYE2BA6NHP3 402 aa10.85□□□□□ -0.67
NPHP1-206ENST00000422492 SPDYE6P0CI01 402 aa10.85□□□□□ -0.67
NPHP1-206ENST00000422492 SPDYE2Q495Y8 402 aa10.85□□□□□ -0.67
NPHP1-206ENST00000422492 SP7Q8TDD2 431 aaPredicted RBP10.83□□□□□ -0.68
NPHP1-206ENST00000422492 FXR2P51116 673 aaKnown RBP eCLIP10.81□□□□□ -0.68
NPHP1-206ENST00000422492 MKRN4PQ13434 485 aaPredicted RBP10.77□□□□□ -0.69
NPHP1-206ENST00000422492 HAX1O00165 279 aa10.73□□□□□ -0.69
NPHP1-206ENST00000422492 SPDYE1Q8NFV5 336 aaPredicted RBP10.69□□□□□ -0.7
NPHP1-206ENST00000422492 ZNF692Q9BU19 519 aaPredicted RBP10.69□□□□□ -0.7
NPHP1-206ENST00000422492 SSUH2Q9Y2M2 353 aa10.69□□□□□ -0.7
NPHP1-206ENST00000422492 CLEC11AQ9Y240 323 aa10.68□□□□□ -0.7
NPHP1-206ENST00000422492 PRKAR2AP13861 404 aaKnown RBP10.62□□□□□ -0.71
NPHP1-206ENST00000422492 EVX2Q03828 476 aa10.56□□□□□ -0.72
NPHP1-206ENST00000422492 CSRNP3Q8WYN3 585 aa10.56□□□□□ -0.72
NPHP1-206ENST00000422492 PABPN1Q86U42 306 aaKnown RBP eCLIP10.54□□□□□ -0.72
NPHP1-206ENST00000422492 C19orf67A6NJJ6 358 aa10.48□□□□□ -0.73
NPHP1-206ENST00000422492 CHADLQ6NUI6 762 aa10.48□□□□□ -0.73
NPHP1-206ENST00000422492 PRR29P0C7W0 189 aa10.47□□□□□ -0.73
NPHP1-206ENST00000422492 EHMT2Q96KQ7 1210 aa10.41□□□□□ -0.74
NPHP1-206ENST00000422492 GABBR2O75899 941 aa10.34□□□□□ -0.75
NPHP1-206ENST00000422492 FARP1Q9Y4F1 1045 aaPredicted RBP10.3□□□□□ -0.76
NPHP1-206ENST00000422492 CD44P16070 742 aaKnown RBP10.29□□□□□ -0.76
NPHP1-206ENST00000422492 SPDYE4A6NLX3 237 aa10.23□□□□□ -0.77
NPHP1-206ENST00000422492 STAG3Q9UJ98 1225 aa10.22□□□□□ -0.77
NPHP1-206ENST00000422492 CREBZFQ9NS37 354 aa10.18□□□□□ -0.78
NPHP1-206ENST00000422492 CLCN6P51797 869 aa10.14□□□□□ -0.79
NPHP1-206ENST00000422492 LHX8Q68G74 356 aa10.14□□□□□ -0.79
NPHP1-206ENST00000422492 ZNF579Q8NAF0 562 aaKnown RBP10.13□□□□□ -0.79
NPHP1-206ENST00000422492 POTEIP0CG38 1075 aa10.12□□□□□ -0.79
NPHP1-206ENST00000422492 ZRANB1Q9UGI0 708 aa10.12□□□□□ -0.79
NPHP1-206ENST00000422492 DCBLD2Q96PD2 775 aa10.06□□□□□ -0.8
NPHP1-206ENST00000422492 PAK3O75914 559 aaPredicted RBP10.04□□□□□ -0.8
NPHP1-206ENST00000422492 NPM1P06748 294 aaKnown RBP eCLIP10.01□□□□□ -0.81
NPHP1-206ENST00000422492 GALR2O43603 387 aaPredicted RBP10□□□□□ -0.81
NPHP1-206ENST00000422492 MNX1P50219 401 aaPredicted RBP9.98□□□□□ -0.81
NPHP1-206ENST00000422492 PHF12Q96QT6 1004 aa9.98□□□□□ -0.81
NPHP1-206ENST00000422492 PROM2Q8N271 834 aa9.96□□□□□ -0.82
NPHP1-206ENST00000422492 MS4A3Q96HJ5 214 aa9.85□□□□□ -0.83
NPHP1-206ENST00000422492 TSPYL2Q9H2G4 693 aaPredicted RBP9.83□□□□□ -0.84
NPHP1-206ENST00000422492 PELP1Q8IZL8 1130 aaKnown RBP9.8□□□□□ -0.84
NPHP1-206ENST00000422492 PLEKHG5O94827 1062 aa9.79□□□□□ -0.84
NPHP1-206ENST00000422492 POTEB2H3BUK9 544 aa9.78□□□□□ -0.84
NPHP1-206ENST00000422492 ASTLQ6HA08 431 aaPredicted RBP9.78□□□□□ -0.84
NPHP1-206ENST00000422492 CCDC61Q9Y6R9 512 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms