RNA–Protein interactions for RNA: ENST00000422448.1

LINC00972-201, long intergenic non-protein coding RNA 972, humanhuman

TSL 2

Gene LINC00972, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00972-201ENST00000422448 AEBP2Q6ZN18 517 aaPredicted RBP32.76■■■□□ 2.83
LINC00972-201ENST00000422448 CHIC1Q5VXU3 224 aa31.09■■■□□ 2.57
LINC00972-201ENST00000422448 SENP3Q9H4L4 574 aaPredicted RBP28.09■■■□□ 2.09
LINC00972-201ENST00000422448 PHF23Q9BUL5 403 aaPredicted RBP27.61■■■□□ 2.01
LINC00972-201ENST00000422448 FOXD1Q16676 465 aa26.08■■□□□ 1.77
LINC00972-201ENST00000422448 PLPPR3Q6T4P5 718 aa24.84■■□□□ 1.57
LINC00972-201ENST00000422448 MSH5O43196 834 aa24.57■■□□□ 1.52
LINC00972-201ENST00000422448 PIAS4Q8N2W9 510 aaPredicted RBP24.4■■□□□ 1.5
LINC00972-201ENST00000422448 PPP6R1Q9UPN7 881 aa24.25■■□□□ 1.47
LINC00972-201ENST00000422448 ADRA2BP18089 450 aa24.18■■□□□ 1.46
LINC00972-201ENST00000422448 POTEDQ86YR6 584 aa24.04■■□□□ 1.44
LINC00972-201ENST00000422448 SCAF1Q9H7N4 1312 aaKnown RBP22.28■■□□□ 1.16
LINC00972-201ENST00000422448 DMRT2Q9Y5R5 561 aa22.24■■□□□ 1.15
LINC00972-201ENST00000422448 MAPK8IP2Q13387 824 aaPredicted RBP22.2■■□□□ 1.14
LINC00972-201ENST00000422448 PPP4R3CPQ6ZMV5 832 aa21.7■■□□□ 1.06
LINC00972-201ENST00000422448 HOXD11P31277 338 aaPredicted RBP21.38■■□□□ 1.01
LINC00972-201ENST00000422448 CNKSR2Q8WXI2 1034 aa21.37■■□□□ 1.01
LINC00972-201ENST00000422448 DCAF8L1A6NGE4 600 aa21.25■□□□□ 0.99
LINC00972-201ENST00000422448 RNF216Q9NWF9 866 aaPredicted RBP21.21■□□□□ 0.99
LINC00972-201ENST00000422448 CACNB1Q02641 598 aaPredicted RBP21.07■□□□□ 0.96
LINC00972-201ENST00000422448 NCBP3Q53F19 620 aaKnown RBP20.92■□□□□ 0.94
LINC00972-201ENST00000422448 RNF39Q9H2S5 420 aa20.9■□□□□ 0.94
LINC00972-201ENST00000422448 DNAJC5BQ9UF47 199 aa20.76■□□□□ 0.91
LINC00972-201ENST00000422448 C1QBPQ07021 282 aaKnown RBP20.63■□□□□ 0.89
LINC00972-201ENST00000422448 NPM3O75607 178 aaKnown RBP20.53■□□□□ 0.88
LINC00972-201ENST00000422448 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.34■□□□□ 0.85
LINC00972-201ENST00000422448 KCNA4P22459 653 aa20.02■□□□□ 0.8
LINC00972-201ENST00000422448 U3KPZ7 1027 aaPredicted RBP19.89■□□□□ 0.77
LINC00972-201ENST00000422448 CAPN15O75808 1086 aa19.6■□□□□ 0.73
LINC00972-201ENST00000422448 SLC4A2P04920 1241 aa19.6■□□□□ 0.73
LINC00972-201ENST00000422448 SPINK5Q9NQ38 1064 aaPredicted RBP19.59■□□□□ 0.73
LINC00972-201ENST00000422448 DSG3P32926 999 aa19.52■□□□□ 0.72
LINC00972-201ENST00000422448 APLP2Q06481 763 aa19.49■□□□□ 0.71
LINC00972-201ENST00000422448 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.41■□□□□ 0.7
LINC00972-201ENST00000422448 HNRNPUL2Q1KMD3 747 aaKnown RBP19.41■□□□□ 0.7
LINC00972-201ENST00000422448 ZNF219Q9P2Y4 722 aaPredicted RBP19.32■□□□□ 0.68
LINC00972-201ENST00000422448 SAMD1Q6SPF0 538 aaPredicted RBP19.27■□□□□ 0.68
LINC00972-201ENST00000422448 TRHP20396 242 aaPredicted RBP19.24■□□□□ 0.67
LINC00972-201ENST00000422448 ABCB7O75027 752 aa19.1■□□□□ 0.65
LINC00972-201ENST00000422448 MYCNP04198 464 aaPredicted RBP19.07■□□□□ 0.64
LINC00972-201ENST00000422448 SLC4A1APQ9BWU0 796 aaKnown RBP18.92■□□□□ 0.62
LINC00972-201ENST00000422448 POTEHQ6S545 545 aa18.85■□□□□ 0.61
LINC00972-201ENST00000422448 FOXD4L1Q9NU39 408 aa18.8■□□□□ 0.6
LINC00972-201ENST00000422448 RBM42Q9BTD8 480 aaKnown RBP18.74■□□□□ 0.59
LINC00972-201ENST00000422448 POLA2Q14181 598 aa18.7■□□□□ 0.58
LINC00972-201ENST00000422448 ATF5Q9Y2D1 282 aaPredicted RBP18.49■□□□□ 0.55
LINC00972-201ENST00000422448 ZBTB12Q9Y330 459 aaPredicted RBP18.47■□□□□ 0.55
LINC00972-201ENST00000422448 ZBTB22O15209 634 aa18.37■□□□□ 0.53
LINC00972-201ENST00000422448 ATXN8OSP0DMR3 200 aa18.28■□□□□ 0.52
LINC00972-201ENST00000422448 CHRDL2Q6WN34 429 aa18.28■□□□□ 0.52
LINC00972-201ENST00000422448 AKT1S1Q96B36 256 aa18.24■□□□□ 0.51
LINC00972-201ENST00000422448 OSCARQ8IYS5 282 aa18.14■□□□□ 0.49
LINC00972-201ENST00000422448 REM2Q8IYK8 340 aaPredicted RBP18.01■□□□□ 0.47
LINC00972-201ENST00000422448 FBLN2P98095 1184 aa17.92■□□□□ 0.46
LINC00972-201ENST00000422448 SPDYE2BA6NHP3 402 aa17.84■□□□□ 0.45
LINC00972-201ENST00000422448 SPDYE6P0CI01 402 aa17.84■□□□□ 0.45
LINC00972-201ENST00000422448 SPDYE2Q495Y8 402 aa17.84■□□□□ 0.45
LINC00972-201ENST00000422448 PITPNM1O00562 1244 aa17.82■□□□□ 0.44
LINC00972-201ENST00000422448 PIP4P2Q8N4L2 257 aa17.8■□□□□ 0.44
LINC00972-201ENST00000422448 FXR2P51116 673 aaKnown RBP eCLIP17.71■□□□□ 0.43
LINC00972-201ENST00000422448 MKRN4PQ13434 485 aaPredicted RBP17.67■□□□□ 0.42
LINC00972-201ENST00000422448 SP7Q8TDD2 431 aaPredicted RBP17.64■□□□□ 0.41
LINC00972-201ENST00000422448 SSUH2Q9Y2M2 353 aa17.57■□□□□ 0.4
LINC00972-201ENST00000422448 SPDYE1Q8NFV5 336 aaPredicted RBP17.55■□□□□ 0.4
LINC00972-201ENST00000422448 ZNF692Q9BU19 519 aaPredicted RBP17.54■□□□□ 0.4
LINC00972-201ENST00000422448 HAX1O00165 279 aa17.48■□□□□ 0.39
LINC00972-201ENST00000422448 CSRNP3Q8WYN3 585 aa17.45■□□□□ 0.38
LINC00972-201ENST00000422448 CLEC11AQ9Y240 323 aa17.44■□□□□ 0.38
LINC00972-201ENST00000422448 PRKAR2AP13861 404 aaKnown RBP17.36■□□□□ 0.37
LINC00972-201ENST00000422448 PABPN1Q86U42 306 aaKnown RBP eCLIP17.28■□□□□ 0.36
LINC00972-201ENST00000422448 EVX2Q03828 476 aa17.18■□□□□ 0.34
LINC00972-201ENST00000422448 PRR29P0C7W0 189 aa17.17■□□□□ 0.34
LINC00972-201ENST00000422448 EHMT2Q96KQ7 1210 aa17.15■□□□□ 0.34
LINC00972-201ENST00000422448 C19orf67A6NJJ6 358 aa17.14■□□□□ 0.33
LINC00972-201ENST00000422448 CHADLQ6NUI6 762 aa17.08■□□□□ 0.32
LINC00972-201ENST00000422448 FARP1Q9Y4F1 1045 aaPredicted RBP16.88■□□□□ 0.29
LINC00972-201ENST00000422448 GABBR2O75899 941 aa16.87■□□□□ 0.29
LINC00972-201ENST00000422448 STAG3Q9UJ98 1225 aa16.87■□□□□ 0.29
LINC00972-201ENST00000422448 SPDYE4A6NLX3 237 aa16.83■□□□□ 0.28
LINC00972-201ENST00000422448 CD44P16070 742 aaKnown RBP16.82■□□□□ 0.28
LINC00972-201ENST00000422448 CLCN6P51797 869 aa16.74■□□□□ 0.27
LINC00972-201ENST00000422448 CREBZFQ9NS37 354 aa16.7■□□□□ 0.26
LINC00972-201ENST00000422448 ZNF579Q8NAF0 562 aaKnown RBP16.6■□□□□ 0.25
LINC00972-201ENST00000422448 ZRANB1Q9UGI0 708 aa16.54■□□□□ 0.24
LINC00972-201ENST00000422448 LHX8Q68G74 356 aa16.52■□□□□ 0.24
LINC00972-201ENST00000422448 PAK3O75914 559 aaPredicted RBP16.48■□□□□ 0.23
LINC00972-201ENST00000422448 POTEIP0CG38 1075 aa16.48■□□□□ 0.23
LINC00972-201ENST00000422448 NPM1P06748 294 aaKnown RBP eCLIP16.47■□□□□ 0.23
LINC00972-201ENST00000422448 PROM2Q8N271 834 aa16.46■□□□□ 0.23
LINC00972-201ENST00000422448 DCBLD2Q96PD2 775 aa16.44■□□□□ 0.22
LINC00972-201ENST00000422448 MNX1P50219 401 aaPredicted RBP16.4■□□□□ 0.22
LINC00972-201ENST00000422448 GALR2O43603 387 aaPredicted RBP16.32■□□□□ 0.2
LINC00972-201ENST00000422448 PHF12Q96QT6 1004 aa16.28■□□□□ 0.2
LINC00972-201ENST00000422448 PLEKHG5O94827 1062 aa16.16■□□□□ 0.18
LINC00972-201ENST00000422448 MS4A3Q96HJ5 214 aa16.09■□□□□ 0.17
LINC00972-201ENST00000422448 TSPYL2Q9H2G4 693 aaPredicted RBP16.07■□□□□ 0.16
LINC00972-201ENST00000422448 CCDC61Q9Y6R9 512 aa16.05■□□□□ 0.16
LINC00972-201ENST00000422448 ASTLQ6HA08 431 aaPredicted RBP16.03■□□□□ 0.16
LINC00972-201ENST00000422448 MIER1Q8N108 512 aa16.03■□□□□ 0.16
LINC00972-201ENST00000422448 ATMINO43313 823 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms