RNA–Protein interactions for RNA: ENST00000420924.1

NEB-206, Transcript of nebulin, humanhuman

TSL 5

Gene NEB, Length 751 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-206ENST00000420924 AEBP2Q6ZN18 517 aaPredicted RBP26.08■■□□□ 1.77
NEB-206ENST00000420924 CHIC1Q5VXU3 224 aa25.89■■□□□ 1.74
NEB-206ENST00000420924 PHF23Q9BUL5 403 aaPredicted RBP22.88■■□□□ 1.25
NEB-206ENST00000420924 SENP3Q9H4L4 574 aaPredicted RBP21.92■■□□□ 1.1
NEB-206ENST00000420924 PLPPR3Q6T4P5 718 aa21.18■□□□□ 0.98
NEB-206ENST00000420924 FOXD1Q16676 465 aa20.37■□□□□ 0.85
NEB-206ENST00000420924 PPP6R1Q9UPN7 881 aa20.04■□□□□ 0.8
NEB-206ENST00000420924 ADRA2BP18089 450 aa20■□□□□ 0.79
NEB-206ENST00000420924 PIAS4Q8N2W9 510 aaPredicted RBP19.25■□□□□ 0.67
NEB-206ENST00000420924 KCNA4P22459 653 aa18.91■□□□□ 0.62
NEB-206ENST00000420924 PPP4R3CPQ6ZMV5 832 aa18.77■□□□□ 0.6
NEB-206ENST00000420924 MSH5O43196 834 aa18.49■□□□□ 0.55
NEB-206ENST00000420924 NCBP3Q53F19 620 aaKnown RBP18.33■□□□□ 0.52
NEB-206ENST00000420924 SCAF1Q9H7N4 1312 aaKnown RBP18.18■□□□□ 0.5
NEB-206ENST00000420924 NPM3O75607 178 aaKnown RBP18.16■□□□□ 0.5
NEB-206ENST00000420924 CNKSR2Q8WXI2 1034 aa18.1■□□□□ 0.49
NEB-206ENST00000420924 EHMT2Q96KQ7 1210 aa18.08■□□□□ 0.48
NEB-206ENST00000420924 POTEDQ86YR6 584 aa18.06■□□□□ 0.48
NEB-206ENST00000420924 SLC4A1APQ9BWU0 796 aaKnown RBP18.04■□□□□ 0.48
NEB-206ENST00000420924 MAPK8IP2Q13387 824 aaPredicted RBP18.02■□□□□ 0.48
NEB-206ENST00000420924 CSRNP3Q8WYN3 585 aa17.74■□□□□ 0.43
NEB-206ENST00000420924 RNF216Q9NWF9 866 aaPredicted RBP17.64■□□□□ 0.41
NEB-206ENST00000420924 DMRT2Q9Y5R5 561 aa17.62■□□□□ 0.41
NEB-206ENST00000420924 DNAJC5BQ9UF47 199 aa17.6■□□□□ 0.41
NEB-206ENST00000420924 HOXD11P31277 338 aaPredicted RBP17.48■□□□□ 0.39
NEB-206ENST00000420924 ZBTB22O15209 634 aa17.46■□□□□ 0.39
NEB-206ENST00000420924 FOXD4L1Q9NU39 408 aa17.21■□□□□ 0.35
NEB-206ENST00000420924 SLC4A2P04920 1241 aa17.08■□□□□ 0.32
NEB-206ENST00000420924 DCAF8L1A6NGE4 600 aa16.74■□□□□ 0.27
NEB-206ENST00000420924 MYCNP04198 464 aaPredicted RBP16.71■□□□□ 0.27
NEB-206ENST00000420924 ATXN8OSP0DMR3 200 aa16.57■□□□□ 0.24
NEB-206ENST00000420924 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.56■□□□□ 0.24
NEB-206ENST00000420924 U3KPZ7 1027 aaPredicted RBP16.44■□□□□ 0.22
NEB-206ENST00000420924 ATF5Q9Y2D1 282 aaPredicted RBP16.34■□□□□ 0.21
NEB-206ENST00000420924 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.27■□□□□ 0.2
NEB-206ENST00000420924 HNRNPUL2Q1KMD3 747 aaKnown RBP16.27■□□□□ 0.2
NEB-206ENST00000420924 SAMD1Q6SPF0 538 aaPredicted RBP16.27■□□□□ 0.2
NEB-206ENST00000420924 RNF39Q9H2S5 420 aa15.96■□□□□ 0.15
NEB-206ENST00000420924 APLP2Q06481 763 aa15.95■□□□□ 0.14
NEB-206ENST00000420924 ZNF219Q9P2Y4 722 aaPredicted RBP15.95■□□□□ 0.14
NEB-206ENST00000420924 FKBP8Q14318 412 aa15.94■□□□□ 0.14
NEB-206ENST00000420924 SPINK5Q9NQ38 1064 aaPredicted RBP15.84■□□□□ 0.13
NEB-206ENST00000420924 C1QBPQ07021 282 aaKnown RBP15.75■□□□□ 0.11
NEB-206ENST00000420924 TRHP20396 242 aaPredicted RBP15.72■□□□□ 0.11
NEB-206ENST00000420924 CAPN15O75808 1086 aa15.66■□□□□ 0.1
NEB-206ENST00000420924 MKRN4PQ13434 485 aaPredicted RBP15.65■□□□□ 0.1
NEB-206ENST00000420924 POLA2Q14181 598 aa15.61■□□□□ 0.09
NEB-206ENST00000420924 FBLN2P98095 1184 aa15.47■□□□□ 0.07
NEB-206ENST00000420924 CACNB1Q02641 598 aaPredicted RBP15.47■□□□□ 0.07
NEB-206ENST00000420924 ABCB7O75027 752 aa15.45■□□□□ 0.06
NEB-206ENST00000420924 SPDYE4A6NLX3 237 aa15.44■□□□□ 0.06
NEB-206ENST00000420924 RTN4Q9NQC3 1192 aaKnown RBP15.4■□□□□ 0.06
NEB-206ENST00000420924 DSG3P32926 999 aa15.36■□□□□ 0.05
NEB-206ENST00000420924 AMER1Q5JTC6 1135 aaPredicted RBP15.35■□□□□ 0.05
NEB-206ENST00000420924 PROM2Q8N271 834 aa15.35■□□□□ 0.05
NEB-206ENST00000420924 ZBTB12Q9Y330 459 aaPredicted RBP15.31■□□□□ 0.04
NEB-206ENST00000420924 FBXO3Q9UK99 471 aa15.17■□□□□ 0.02
NEB-206ENST00000420924 OSCARQ8IYS5 282 aa15.06■□□□□ 0
NEB-206ENST00000420924 VASPP50552 380 aaPredicted RBP15.01□□□□□ -0.01
NEB-206ENST00000420924 ZNF692Q9BU19 519 aaPredicted RBP15□□□□□ -0.01
NEB-206ENST00000420924 SPDYE2BA6NHP3 402 aa14.99□□□□□ -0.01
NEB-206ENST00000420924 SPDYE6P0CI01 402 aa14.99□□□□□ -0.01
NEB-206ENST00000420924 SPDYE2Q495Y8 402 aa14.99□□□□□ -0.01
NEB-206ENST00000420924 SSUH2Q9Y2M2 353 aa14.98□□□□□ -0.01
NEB-206ENST00000420924 IFNLR1Q8IU57 520 aaPredicted RBP14.9□□□□□ -0.02
NEB-206ENST00000420924 PABPN1Q86U42 306 aaKnown RBP eCLIP14.84□□□□□ -0.03
NEB-206ENST00000420924 STAG3Q9UJ98 1225 aa14.75□□□□□ -0.05
NEB-206ENST00000420924 SLC24A1O60721 1099 aa14.66□□□□□ -0.06
NEB-206ENST00000420924 PKD2Q13563 968 aa14.6□□□□□ -0.07
NEB-206ENST00000420924 KLHL34Q8N239 644 aa14.58□□□□□ -0.08
NEB-206ENST00000420924 PLCD3Q8N3E9 789 aa14.57□□□□□ -0.08
NEB-206ENST00000420924 SPOCK2Q92563 424 aa14.57□□□□□ -0.08
NEB-206ENST00000420924 MIER1Q8N108 512 aa14.56□□□□□ -0.08
NEB-206ENST00000420924 RBM42Q9BTD8 480 aaKnown RBP14.52□□□□□ -0.09
NEB-206ENST00000420924 AKT1S1Q96B36 256 aa14.51□□□□□ -0.09
NEB-206ENST00000420924 SPDYE1Q8NFV5 336 aaPredicted RBP14.41□□□□□ -0.1
NEB-206ENST00000420924 REM2Q8IYK8 340 aaPredicted RBP14.39□□□□□ -0.11
NEB-206ENST00000420924 PLEKHG5O94827 1062 aa14.36□□□□□ -0.11
NEB-206ENST00000420924 ZBTB47Q9UFB7 747 aaPredicted RBP14.35□□□□□ -0.11
NEB-206ENST00000420924 ECM2O94769 699 aaPredicted RBP14.33□□□□□ -0.12
NEB-206ENST00000420924 CLEC11AQ9Y240 323 aa14.31□□□□□ -0.12
NEB-206ENST00000420924 DCAF8L2P0C7V8 631 aa14.3□□□□□ -0.12
NEB-206ENST00000420924 CREBZFQ9NS37 354 aa14.28□□□□□ -0.12
NEB-206ENST00000420924 PRR29P0C7W0 189 aa14.27□□□□□ -0.13
NEB-206ENST00000420924 RGL2O15211 777 aa14.24□□□□□ -0.13
NEB-206ENST00000420924 MNX1P50219 401 aaPredicted RBP14.23□□□□□ -0.13
NEB-206ENST00000420924 PLCB2Q00722 1185 aa14.23□□□□□ -0.13
NEB-206ENST00000420924 CIZ1Q9ULV3 898 aaPredicted RBP14.23□□□□□ -0.13
NEB-206ENST00000420924 PITPNM1O00562 1244 aa14.22□□□□□ -0.13
NEB-206ENST00000420924 NUBP1P53384 320 aa14.22□□□□□ -0.13
NEB-206ENST00000420924 NPM1P06748 294 aaKnown RBP eCLIP14.18□□□□□ -0.14
NEB-206ENST00000420924 TRIM41Q8WV44 630 aa14.11□□□□□ -0.15
NEB-206ENST00000420924 GSE1Q14687 1217 aa14.1□□□□□ -0.15
NEB-206ENST00000420924 POTEHQ6S545 545 aa14.07□□□□□ -0.16
NEB-206ENST00000420924 BBXQ8WY36 941 aaPredicted RBP14.07□□□□□ -0.16
NEB-206ENST00000420924 DCAF8Q5TAQ9 597 aa14.06□□□□□ -0.16
NEB-206ENST00000420924 RNF25Q96BH1 459 aaPredicted RBP14.05□□□□□ -0.16
NEB-206ENST00000420924 RASEFQ8IZ41 740 aa14.03□□□□□ -0.16
NEB-206ENST00000420924 FAM212AQ96EL1 285 aa13.99□□□□□ -0.17
NEB-206ENST00000420924 HAP1P54257 671 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms