RNA–Protein interactions for RNA: ENST00000420107.1

CNOT11-202, Transcript of CCR4-NOT transcription complex subunit 11, humanhuman

TSL 2

Gene CNOT11, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11-202ENST00000420107 AEBP2Q6ZN18 517 aaPredicted RBP26.16■■□□□ 1.78
CNOT11-202ENST00000420107 CHIC1Q5VXU3 224 aa25.95■■□□□ 1.74
CNOT11-202ENST00000420107 PHF23Q9BUL5 403 aaPredicted RBP22.9■■□□□ 1.26
CNOT11-202ENST00000420107 SENP3Q9H4L4 574 aaPredicted RBP22.09■■□□□ 1.13
CNOT11-202ENST00000420107 PLPPR3Q6T4P5 718 aa21.23■□□□□ 0.99
CNOT11-202ENST00000420107 FOXD1Q16676 465 aa20.47■□□□□ 0.87
CNOT11-202ENST00000420107 PPP6R1Q9UPN7 881 aa20.04■□□□□ 0.8
CNOT11-202ENST00000420107 ADRA2BP18089 450 aa20.02■□□□□ 0.8
CNOT11-202ENST00000420107 PIAS4Q8N2W9 510 aaPredicted RBP19.37■□□□□ 0.69
CNOT11-202ENST00000420107 KCNA4P22459 653 aa18.83■□□□□ 0.6
CNOT11-202ENST00000420107 PPP4R3CPQ6ZMV5 832 aa18.77■□□□□ 0.6
CNOT11-202ENST00000420107 MSH5O43196 834 aa18.68■□□□□ 0.58
CNOT11-202ENST00000420107 NCBP3Q53F19 620 aaKnown RBP18.37■□□□□ 0.53
CNOT11-202ENST00000420107 SCAF1Q9H7N4 1312 aaKnown RBP18.28■□□□□ 0.52
CNOT11-202ENST00000420107 NPM3O75607 178 aaKnown RBP18.15■□□□□ 0.5
CNOT11-202ENST00000420107 CNKSR2Q8WXI2 1034 aa18.15■□□□□ 0.5
CNOT11-202ENST00000420107 MAPK8IP2Q13387 824 aaPredicted RBP18.04■□□□□ 0.48
CNOT11-202ENST00000420107 SLC4A1APQ9BWU0 796 aaKnown RBP17.98■□□□□ 0.47
CNOT11-202ENST00000420107 EHMT2Q96KQ7 1210 aa17.93■□□□□ 0.46
CNOT11-202ENST00000420107 DMRT2Q9Y5R5 561 aa17.73■□□□□ 0.43
CNOT11-202ENST00000420107 RNF216Q9NWF9 866 aaPredicted RBP17.7■□□□□ 0.42
CNOT11-202ENST00000420107 DNAJC5BQ9UF47 199 aa17.64■□□□□ 0.41
CNOT11-202ENST00000420107 CSRNP3Q8WYN3 585 aa17.6■□□□□ 0.41
CNOT11-202ENST00000420107 POTEDQ86YR6 584 aa17.56■□□□□ 0.4
CNOT11-202ENST00000420107 HOXD11P31277 338 aaPredicted RBP17.54■□□□□ 0.4
CNOT11-202ENST00000420107 ZBTB22O15209 634 aa17.37■□□□□ 0.37
CNOT11-202ENST00000420107 FOXD4L1Q9NU39 408 aa17.2■□□□□ 0.34
CNOT11-202ENST00000420107 SLC4A2P04920 1241 aa17.06■□□□□ 0.32
CNOT11-202ENST00000420107 DCAF8L1A6NGE4 600 aa16.83■□□□□ 0.28
CNOT11-202ENST00000420107 MYCNP04198 464 aaPredicted RBP16.75■□□□□ 0.27
CNOT11-202ENST00000420107 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.64■□□□□ 0.25
CNOT11-202ENST00000420107 ATXN8OSP0DMR3 200 aa16.58■□□□□ 0.24
CNOT11-202ENST00000420107 U3KPZ7 1027 aaPredicted RBP16.48■□□□□ 0.23
CNOT11-202ENST00000420107 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.36■□□□□ 0.21
CNOT11-202ENST00000420107 HNRNPUL2Q1KMD3 747 aaKnown RBP16.36■□□□□ 0.21
CNOT11-202ENST00000420107 SAMD1Q6SPF0 538 aaPredicted RBP16.34■□□□□ 0.21
CNOT11-202ENST00000420107 ATF5Q9Y2D1 282 aaPredicted RBP16.29■□□□□ 0.2
CNOT11-202ENST00000420107 APLP2Q06481 763 aa16.08■□□□□ 0.16
CNOT11-202ENST00000420107 RNF39Q9H2S5 420 aa16.08■□□□□ 0.16
CNOT11-202ENST00000420107 ZNF219Q9P2Y4 722 aaPredicted RBP15.97■□□□□ 0.15
CNOT11-202ENST00000420107 C1QBPQ07021 282 aaKnown RBP15.89■□□□□ 0.13
CNOT11-202ENST00000420107 SPINK5Q9NQ38 1064 aaPredicted RBP15.88■□□□□ 0.13
CNOT11-202ENST00000420107 FKBP8Q14318 412 aa15.83■□□□□ 0.12
CNOT11-202ENST00000420107 TRHP20396 242 aaPredicted RBP15.77■□□□□ 0.12
CNOT11-202ENST00000420107 CAPN15O75808 1086 aa15.74■□□□□ 0.11
CNOT11-202ENST00000420107 POLA2Q14181 598 aa15.64■□□□□ 0.09
CNOT11-202ENST00000420107 MKRN4PQ13434 485 aaPredicted RBP15.62■□□□□ 0.09
CNOT11-202ENST00000420107 FBLN2P98095 1184 aa15.51■□□□□ 0.07
CNOT11-202ENST00000420107 ABCB7O75027 752 aa15.5■□□□□ 0.07
CNOT11-202ENST00000420107 DSG3P32926 999 aa15.44■□□□□ 0.06
CNOT11-202ENST00000420107 SPDYE4A6NLX3 237 aa15.42■□□□□ 0.06
CNOT11-202ENST00000420107 ZBTB12Q9Y330 459 aaPredicted RBP15.41■□□□□ 0.06
CNOT11-202ENST00000420107 PROM2Q8N271 834 aa15.31■□□□□ 0.04
CNOT11-202ENST00000420107 CACNB1Q02641 598 aaPredicted RBP15.28■□□□□ 0.04
CNOT11-202ENST00000420107 AMER1Q5JTC6 1135 aaPredicted RBP15.19■□□□□ 0.02
CNOT11-202ENST00000420107 RTN4Q9NQC3 1192 aaKnown RBP15.18■□□□□ 0.02
CNOT11-202ENST00000420107 FBXO3Q9UK99 471 aa15.15■□□□□ 0.02
CNOT11-202ENST00000420107 OSCARQ8IYS5 282 aa15.1■□□□□ 0.01
CNOT11-202ENST00000420107 SPDYE2BA6NHP3 402 aa15.05■□□□□ -0
CNOT11-202ENST00000420107 SPDYE6P0CI01 402 aa15.05■□□□□ -0
CNOT11-202ENST00000420107 SPDYE2Q495Y8 402 aa15.05■□□□□ -0
CNOT11-202ENST00000420107 ZNF692Q9BU19 519 aaPredicted RBP15.02■□□□□ -0
CNOT11-202ENST00000420107 SSUH2Q9Y2M2 353 aa15.01□□□□□ -0.01
CNOT11-202ENST00000420107 VASPP50552 380 aaPredicted RBP14.96□□□□□ -0.01
CNOT11-202ENST00000420107 PABPN1Q86U42 306 aaKnown RBP eCLIP14.85□□□□□ -0.03
CNOT11-202ENST00000420107 IFNLR1Q8IU57 520 aaPredicted RBP14.8□□□□□ -0.04
CNOT11-202ENST00000420107 STAG3Q9UJ98 1225 aa14.76□□□□□ -0.05
CNOT11-202ENST00000420107 RBM42Q9BTD8 480 aaKnown RBP14.66□□□□□ -0.06
CNOT11-202ENST00000420107 AKT1S1Q96B36 256 aa14.6□□□□□ -0.07
CNOT11-202ENST00000420107 PLCD3Q8N3E9 789 aa14.57□□□□□ -0.08
CNOT11-202ENST00000420107 MIER1Q8N108 512 aa14.54□□□□□ -0.08
CNOT11-202ENST00000420107 KLHL34Q8N239 644 aa14.54□□□□□ -0.08
CNOT11-202ENST00000420107 SPOCK2Q92563 424 aa14.53□□□□□ -0.08
CNOT11-202ENST00000420107 SLC24A1O60721 1099 aa14.49□□□□□ -0.09
CNOT11-202ENST00000420107 SPDYE1Q8NFV5 336 aaPredicted RBP14.49□□□□□ -0.09
CNOT11-202ENST00000420107 PKD2Q13563 968 aa14.48□□□□□ -0.09
CNOT11-202ENST00000420107 REM2Q8IYK8 340 aaPredicted RBP14.46□□□□□ -0.09
CNOT11-202ENST00000420107 PLEKHG5O94827 1062 aa14.4□□□□□ -0.1
CNOT11-202ENST00000420107 ZBTB47Q9UFB7 747 aaPredicted RBP14.39□□□□□ -0.11
CNOT11-202ENST00000420107 CLEC11AQ9Y240 323 aa14.36□□□□□ -0.11
CNOT11-202ENST00000420107 PRR29P0C7W0 189 aa14.31□□□□□ -0.12
CNOT11-202ENST00000420107 PITPNM1O00562 1244 aa14.29□□□□□ -0.12
CNOT11-202ENST00000420107 CREBZFQ9NS37 354 aa14.28□□□□□ -0.12
CNOT11-202ENST00000420107 ECM2O94769 699 aaPredicted RBP14.26□□□□□ -0.13
CNOT11-202ENST00000420107 MNX1P50219 401 aaPredicted RBP14.22□□□□□ -0.13
CNOT11-202ENST00000420107 NUBP1P53384 320 aa14.2□□□□□ -0.14
CNOT11-202ENST00000420107 DCAF8L2P0C7V8 631 aa14.19□□□□□ -0.14
CNOT11-202ENST00000420107 CIZ1Q9ULV3 898 aaPredicted RBP14.19□□□□□ -0.14
CNOT11-202ENST00000420107 RGL2O15211 777 aa14.15□□□□□ -0.14
CNOT11-202ENST00000420107 TRIM41Q8WV44 630 aa14.12□□□□□ -0.15
CNOT11-202ENST00000420107 GSE1Q14687 1217 aa14.11□□□□□ -0.15
CNOT11-202ENST00000420107 PLCB2Q00722 1185 aa14.06□□□□□ -0.16
CNOT11-202ENST00000420107 DCAF8Q5TAQ9 597 aa14.03□□□□□ -0.16
CNOT11-202ENST00000420107 RASEFQ8IZ41 740 aa14.03□□□□□ -0.16
CNOT11-202ENST00000420107 NPM1P06748 294 aaKnown RBP eCLIP14.02□□□□□ -0.17
CNOT11-202ENST00000420107 FAM212AQ96EL1 285 aa14.02□□□□□ -0.17
CNOT11-202ENST00000420107 CHADLQ6NUI6 762 aa14□□□□□ -0.17
CNOT11-202ENST00000420107 BBXQ8WY36 941 aaPredicted RBP13.97□□□□□ -0.17
CNOT11-202ENST00000420107 RNF25Q96BH1 459 aaPredicted RBP13.97□□□□□ -0.17
CNOT11-202ENST00000420107 FXR2P51116 673 aaKnown RBP eCLIP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms