RNA–Protein interactions for RNA: ENST00000419884.5

LRPPRC-204, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 5

Gene LRPPRC, Length 888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-204ENST00000419884 AEBP2Q6ZN18 517 aaPredicted RBP22.19■■□□□ 1.14
LRPPRC-204ENST00000419884 CHIC1Q5VXU3 224 aa21.36■■□□□ 1.01
LRPPRC-204ENST00000419884 SENP3Q9H4L4 574 aaPredicted RBP18.95■□□□□ 0.62
LRPPRC-204ENST00000419884 PHF23Q9BUL5 403 aaPredicted RBP18.72■□□□□ 0.59
LRPPRC-204ENST00000419884 FOXD1Q16676 465 aa17.59■□□□□ 0.41
LRPPRC-204ENST00000419884 PLPPR3Q6T4P5 718 aa17.21■□□□□ 0.35
LRPPRC-204ENST00000419884 PPP6R1Q9UPN7 881 aa16.63■□□□□ 0.25
LRPPRC-204ENST00000419884 ADRA2BP18089 450 aa16.62■□□□□ 0.25
LRPPRC-204ENST00000419884 PIAS4Q8N2W9 510 aaPredicted RBP16.54■□□□□ 0.24
LRPPRC-204ENST00000419884 MSH5O43196 834 aa16.4■□□□□ 0.22
LRPPRC-204ENST00000419884 POTEDQ86YR6 584 aa15.52■□□□□ 0.08
LRPPRC-204ENST00000419884 SCAF1Q9H7N4 1312 aaKnown RBP15.26■□□□□ 0.03
LRPPRC-204ENST00000419884 MAPK8IP2Q13387 824 aaPredicted RBP15.17■□□□□ 0.02
LRPPRC-204ENST00000419884 PPP4R3CPQ6ZMV5 832 aa15.11■□□□□ 0.01
LRPPRC-204ENST00000419884 DMRT2Q9Y5R5 561 aa15.05■□□□□ -0
LRPPRC-204ENST00000419884 CNKSR2Q8WXI2 1034 aa14.78□□□□□ -0.04
LRPPRC-204ENST00000419884 NCBP3Q53F19 620 aaKnown RBP14.65□□□□□ -0.06
LRPPRC-204ENST00000419884 HOXD11P31277 338 aaPredicted RBP14.59□□□□□ -0.07
LRPPRC-204ENST00000419884 RNF216Q9NWF9 866 aaPredicted RBP14.56□□□□□ -0.08
LRPPRC-204ENST00000419884 DCAF8L1A6NGE4 600 aa14.46□□□□□ -0.09
LRPPRC-204ENST00000419884 NPM3O75607 178 aaKnown RBP14.39□□□□□ -0.11
LRPPRC-204ENST00000419884 KCNA4P22459 653 aa14.35□□□□□ -0.11
LRPPRC-204ENST00000419884 DNAJC5BQ9UF47 199 aa14.04□□□□□ -0.16
LRPPRC-204ENST00000419884 RNF39Q9H2S5 420 aa14□□□□□ -0.17
LRPPRC-204ENST00000419884 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.94□□□□□ -0.18
LRPPRC-204ENST00000419884 CACNB1Q02641 598 aaPredicted RBP13.91□□□□□ -0.18
LRPPRC-204ENST00000419884 C1QBPQ07021 282 aaKnown RBP13.82□□□□□ -0.2
LRPPRC-204ENST00000419884 SLC4A2P04920 1241 aa13.66□□□□□ -0.22
LRPPRC-204ENST00000419884 U3KPZ7 1027 aaPredicted RBP13.64□□□□□ -0.23
LRPPRC-204ENST00000419884 SLC4A1APQ9BWU0 796 aaKnown RBP13.63□□□□□ -0.23
LRPPRC-204ENST00000419884 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.4□□□□□ -0.26
LRPPRC-204ENST00000419884 HNRNPUL2Q1KMD3 747 aaKnown RBP13.4□□□□□ -0.26
LRPPRC-204ENST00000419884 CAPN15O75808 1086 aa13.36□□□□□ -0.27
LRPPRC-204ENST00000419884 APLP2Q06481 763 aa13.36□□□□□ -0.27
LRPPRC-204ENST00000419884 SPINK5Q9NQ38 1064 aaPredicted RBP13.36□□□□□ -0.27
LRPPRC-204ENST00000419884 MYCNP04198 464 aaPredicted RBP13.34□□□□□ -0.27
LRPPRC-204ENST00000419884 FOXD4L1Q9NU39 408 aa13.33□□□□□ -0.28
LRPPRC-204ENST00000419884 SAMD1Q6SPF0 538 aaPredicted RBP13.32□□□□□ -0.28
LRPPRC-204ENST00000419884 TRHP20396 242 aaPredicted RBP13.21□□□□□ -0.29
LRPPRC-204ENST00000419884 ZNF219Q9P2Y4 722 aaPredicted RBP13.2□□□□□ -0.3
LRPPRC-204ENST00000419884 DSG3P32926 999 aa13.19□□□□□ -0.3
LRPPRC-204ENST00000419884 ZBTB22O15209 634 aa13.18□□□□□ -0.3
LRPPRC-204ENST00000419884 ABCB7O75027 752 aa13.06□□□□□ -0.32
LRPPRC-204ENST00000419884 ATF5Q9Y2D1 282 aaPredicted RBP12.95□□□□□ -0.34
LRPPRC-204ENST00000419884 ATXN8OSP0DMR3 200 aa12.9□□□□□ -0.34
LRPPRC-204ENST00000419884 POLA2Q14181 598 aa12.9□□□□□ -0.34
LRPPRC-204ENST00000419884 EHMT2Q96KQ7 1210 aa12.83□□□□□ -0.36
LRPPRC-204ENST00000419884 CSRNP3Q8WYN3 585 aa12.81□□□□□ -0.36
LRPPRC-204ENST00000419884 ZBTB12Q9Y330 459 aaPredicted RBP12.71□□□□□ -0.37
LRPPRC-204ENST00000419884 RBM42Q9BTD8 480 aaKnown RBP12.62□□□□□ -0.39
LRPPRC-204ENST00000419884 FBLN2P98095 1184 aa12.5□□□□□ -0.41
LRPPRC-204ENST00000419884 OSCARQ8IYS5 282 aa12.48□□□□□ -0.41
LRPPRC-204ENST00000419884 MKRN4PQ13434 485 aaPredicted RBP12.38□□□□□ -0.43
LRPPRC-204ENST00000419884 AKT1S1Q96B36 256 aa12.37□□□□□ -0.43
LRPPRC-204ENST00000419884 SPDYE2BA6NHP3 402 aa12.31□□□□□ -0.44
LRPPRC-204ENST00000419884 SPDYE6P0CI01 402 aa12.31□□□□□ -0.44
LRPPRC-204ENST00000419884 SPDYE2Q495Y8 402 aa12.31□□□□□ -0.44
LRPPRC-204ENST00000419884 REM2Q8IYK8 340 aaPredicted RBP12.24□□□□□ -0.45
LRPPRC-204ENST00000419884 POTEHQ6S545 545 aa12.23□□□□□ -0.45
LRPPRC-204ENST00000419884 CHRDL2Q6WN34 429 aa12.22□□□□□ -0.45
LRPPRC-204ENST00000419884 ZNF692Q9BU19 519 aaPredicted RBP12.2□□□□□ -0.46
LRPPRC-204ENST00000419884 SSUH2Q9Y2M2 353 aa12.15□□□□□ -0.46
LRPPRC-204ENST00000419884 PITPNM1O00562 1244 aa12.11□□□□□ -0.47
LRPPRC-204ENST00000419884 SPDYE1Q8NFV5 336 aaPredicted RBP12.04□□□□□ -0.48
LRPPRC-204ENST00000419884 PABPN1Q86U42 306 aaKnown RBP eCLIP12.03□□□□□ -0.48
LRPPRC-204ENST00000419884 CLEC11AQ9Y240 323 aa12□□□□□ -0.49
LRPPRC-204ENST00000419884 SPDYE4A6NLX3 237 aa11.97□□□□□ -0.49
LRPPRC-204ENST00000419884 PIP4P2Q8N4L2 257 aa11.97□□□□□ -0.49
LRPPRC-204ENST00000419884 FXR2P51116 673 aaKnown RBP eCLIP11.94□□□□□ -0.53e-8■□□□□ 9.5
LRPPRC-204ENST00000419884 PRR29P0C7W0 189 aa11.84□□□□□ -0.51
LRPPRC-204ENST00000419884 PRKAR2AP13861 404 aaKnown RBP11.81□□□□□ -0.52
LRPPRC-204ENST00000419884 STAG3Q9UJ98 1225 aa11.78□□□□□ -0.52
LRPPRC-204ENST00000419884 CHADLQ6NUI6 762 aa11.72□□□□□ -0.53
LRPPRC-204ENST00000419884 HAX1O00165 279 aa11.71□□□□□ -0.53
LRPPRC-204ENST00000419884 PROM2Q8N271 834 aa11.69□□□□□ -0.54
LRPPRC-204ENST00000419884 FKBP8Q14318 412 aa11.64□□□□□ -0.55
LRPPRC-204ENST00000419884 SP7Q8TDD2 431 aaPredicted RBP11.59□□□□□ -0.55
LRPPRC-204ENST00000419884 FARP1Q9Y4F1 1045 aaPredicted RBP11.59□□□□□ -0.55
LRPPRC-204ENST00000419884 CREBZFQ9NS37 354 aa11.58□□□□□ -0.56
LRPPRC-204ENST00000419884 C19orf67A6NJJ6 358 aa11.55□□□□□ -0.56
LRPPRC-204ENST00000419884 EVX2Q03828 476 aa11.53□□□□□ -0.56
LRPPRC-204ENST00000419884 CD44P16070 742 aaKnown RBP11.46□□□□□ -0.57
LRPPRC-204ENST00000419884 NPM1P06748 294 aaKnown RBP eCLIP11.42□□□□□ -0.58
LRPPRC-204ENST00000419884 PLEKHG5O94827 1062 aa11.4□□□□□ -0.58
LRPPRC-204ENST00000419884 MIER1Q8N108 512 aa11.4□□□□□ -0.58
LRPPRC-204ENST00000419884 MNX1P50219 401 aaPredicted RBP11.39□□□□□ -0.59
LRPPRC-204ENST00000419884 PLCD3Q8N3E9 789 aa11.36□□□□□ -0.59
LRPPRC-204ENST00000419884 FBXO3Q9UK99 471 aa11.35□□□□□ -0.59
LRPPRC-204ENST00000419884 PAK3O75914 559 aaPredicted RBP11.34□□□□□ -0.59
LRPPRC-204ENST00000419884 ZRANB1Q9UGI0 708 aa11.33□□□□□ -0.6
LRPPRC-204ENST00000419884 GABBR2O75899 941 aa11.31□□□□□ -0.6
LRPPRC-204ENST00000419884 ZNF579Q8NAF0 562 aaKnown RBP11.29□□□□□ -0.6
LRPPRC-204ENST00000419884 CLCN6P51797 869 aa11.26□□□□□ -0.61
LRPPRC-204ENST00000419884 ZBTB47Q9UFB7 747 aaPredicted RBP11.26□□□□□ -0.61
LRPPRC-204ENST00000419884 TSPYL2Q9H2G4 693 aaPredicted RBP11.21□□□□□ -0.61
LRPPRC-204ENST00000419884 PHF12Q96QT6 1004 aa11.2□□□□□ -0.62
LRPPRC-204ENST00000419884 VASPP50552 380 aaPredicted RBP11.19□□□□□ -0.62
LRPPRC-204ENST00000419884 RASEFQ8IZ41 740 aa11.16□□□□□ -0.62
LRPPRC-204ENST00000419884 CCDC61Q9Y6R9 512 aa11.12□□□□□ -0.63
LRPPRC-204ENST00000419884 GALR2O43603 387 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms