RNA–Protein interactions for RNA: ENST00000419068.1

UCHL3-202, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

TSL 5

Gene UCHL3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-202ENST00000419068 AEBP2Q6ZN18 517 aaPredicted RBP29.68■■■□□ 2.34
UCHL3-202ENST00000419068 CHIC1Q5VXU3 224 aa28.02■■■□□ 2.08
UCHL3-202ENST00000419068 SENP3Q9H4L4 574 aaPredicted RBP25.12■■□□□ 1.61
UCHL3-202ENST00000419068 PHF23Q9BUL5 403 aaPredicted RBP24.89■■□□□ 1.58
UCHL3-202ENST00000419068 FOXD1Q16676 465 aa23.55■■□□□ 1.36
UCHL3-202ENST00000419068 POTEDQ86YR6 584 aa22.45■■□□□ 1.18
UCHL3-202ENST00000419068 PLPPR3Q6T4P5 718 aa22.3■■□□□ 1.16
UCHL3-202ENST00000419068 PPP6R1Q9UPN7 881 aa22.07■■□□□ 1.12
UCHL3-202ENST00000419068 ADRA2BP18089 450 aa21.98■■□□□ 1.11
UCHL3-202ENST00000419068 PIAS4Q8N2W9 510 aaPredicted RBP21.95■■□□□ 1.1
UCHL3-202ENST00000419068 MSH5O43196 834 aa21.88■■□□□ 1.09
UCHL3-202ENST00000419068 MAPK8IP2Q13387 824 aaPredicted RBP20.24■□□□□ 0.83
UCHL3-202ENST00000419068 DMRT2Q9Y5R5 561 aa19.96■□□□□ 0.79
UCHL3-202ENST00000419068 SCAF1Q9H7N4 1312 aaKnown RBP19.86■□□□□ 0.77
UCHL3-202ENST00000419068 PPP4R3CPQ6ZMV5 832 aa19.62■□□□□ 0.73
UCHL3-202ENST00000419068 DCAF8L1A6NGE4 600 aa19.21■□□□□ 0.67
UCHL3-202ENST00000419068 HOXD11P31277 338 aaPredicted RBP19.19■□□□□ 0.66
UCHL3-202ENST00000419068 CNKSR2Q8WXI2 1034 aa19.18■□□□□ 0.66
UCHL3-202ENST00000419068 CACNB1Q02641 598 aaPredicted RBP19.17■□□□□ 0.66
UCHL3-202ENST00000419068 RNF216Q9NWF9 866 aaPredicted RBP19.02■□□□□ 0.64
UCHL3-202ENST00000419068 RNF39Q9H2S5 420 aa18.76■□□□□ 0.59
UCHL3-202ENST00000419068 NCBP3Q53F19 620 aaKnown RBP18.71■□□□□ 0.59
UCHL3-202ENST00000419068 NPM3O75607 178 aaKnown RBP18.61■□□□□ 0.57
UCHL3-202ENST00000419068 C1QBPQ07021 282 aaKnown RBP18.4■□□□□ 0.54
UCHL3-202ENST00000419068 DNAJC5BQ9UF47 199 aa18.39■□□□□ 0.53
UCHL3-202ENST00000419068 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.3■□□□□ 0.527e-7■■□□□ 12.5
UCHL3-202ENST00000419068 KCNA4P22459 653 aa18.28■□□□□ 0.52
UCHL3-202ENST00000419068 U3KPZ7 1027 aaPredicted RBP17.98■□□□□ 0.47
UCHL3-202ENST00000419068 SLC4A2P04920 1241 aa17.82■□□□□ 0.44
UCHL3-202ENST00000419068 SPINK5Q9NQ38 1064 aaPredicted RBP17.78■□□□□ 0.44
UCHL3-202ENST00000419068 CAPN15O75808 1086 aa17.67■□□□□ 0.42
UCHL3-202ENST00000419068 DSG3P32926 999 aa17.59■□□□□ 0.41
UCHL3-202ENST00000419068 POTEHQ6S545 545 aa17.46■□□□□ 0.39
UCHL3-202ENST00000419068 TRHP20396 242 aaPredicted RBP17.4■□□□□ 0.38
UCHL3-202ENST00000419068 ABCB7O75027 752 aa17.33■□□□□ 0.36
UCHL3-202ENST00000419068 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.24■□□□□ 0.35
UCHL3-202ENST00000419068 HNRNPUL2Q1KMD3 747 aaKnown RBP17.24■□□□□ 0.35
UCHL3-202ENST00000419068 ZNF219Q9P2Y4 722 aaPredicted RBP17.24■□□□□ 0.35
UCHL3-202ENST00000419068 APLP2Q06481 763 aa17.21■□□□□ 0.35
UCHL3-202ENST00000419068 SAMD1Q6SPF0 538 aaPredicted RBP17.2■□□□□ 0.34
UCHL3-202ENST00000419068 SLC4A1APQ9BWU0 796 aaKnown RBP17.16■□□□□ 0.34
UCHL3-202ENST00000419068 MYCNP04198 464 aaPredicted RBP17.11■□□□□ 0.33
UCHL3-202ENST00000419068 FOXD4L1Q9NU39 408 aa16.95■□□□□ 0.3
UCHL3-202ENST00000419068 ATF5Q9Y2D1 282 aaPredicted RBP16.92■□□□□ 0.3
UCHL3-202ENST00000419068 POLA2Q14181 598 aa16.91■□□□□ 0.3
UCHL3-202ENST00000419068 ZBTB22O15209 634 aa16.86■□□□□ 0.29
UCHL3-202ENST00000419068 RBM42Q9BTD8 480 aaKnown RBP16.62■□□□□ 0.25
UCHL3-202ENST00000419068 OSCARQ8IYS5 282 aa16.42■□□□□ 0.22
UCHL3-202ENST00000419068 CHRDL2Q6WN34 429 aa16.39■□□□□ 0.21
UCHL3-202ENST00000419068 ZBTB12Q9Y330 459 aaPredicted RBP16.39■□□□□ 0.21
UCHL3-202ENST00000419068 ATXN8OSP0DMR3 200 aa16.34■□□□□ 0.21
UCHL3-202ENST00000419068 AKT1S1Q96B36 256 aa16.29■□□□□ 0.2
UCHL3-202ENST00000419068 REM2Q8IYK8 340 aaPredicted RBP16.23■□□□□ 0.19
UCHL3-202ENST00000419068 MKRN4PQ13434 485 aaPredicted RBP16.1■□□□□ 0.17
UCHL3-202ENST00000419068 PITPNM1O00562 1244 aa16.08■□□□□ 0.16
UCHL3-202ENST00000419068 SP7Q8TDD2 431 aaPredicted RBP16.05■□□□□ 0.16
UCHL3-202ENST00000419068 FBLN2P98095 1184 aa16.04■□□□□ 0.16
UCHL3-202ENST00000419068 PIP4P2Q8N4L2 257 aa16.04■□□□□ 0.16
UCHL3-202ENST00000419068 CSRNP3Q8WYN3 585 aa16■□□□□ 0.15
UCHL3-202ENST00000419068 SPDYE2BA6NHP3 402 aa15.96■□□□□ 0.15
UCHL3-202ENST00000419068 SPDYE6P0CI01 402 aa15.96■□□□□ 0.15
UCHL3-202ENST00000419068 SPDYE2Q495Y8 402 aa15.96■□□□□ 0.15
UCHL3-202ENST00000419068 FXR2P51116 673 aaKnown RBP eCLIP15.89■□□□□ 0.13
UCHL3-202ENST00000419068 ZNF692Q9BU19 519 aaPredicted RBP15.82■□□□□ 0.12
UCHL3-202ENST00000419068 EHMT2Q96KQ7 1210 aa15.81■□□□□ 0.12
UCHL3-202ENST00000419068 SSUH2Q9Y2M2 353 aa15.8■□□□□ 0.12
UCHL3-202ENST00000419068 CLEC11AQ9Y240 323 aa15.76■□□□□ 0.11
UCHL3-202ENST00000419068 HAX1O00165 279 aa15.73■□□□□ 0.11
UCHL3-202ENST00000419068 SPDYE1Q8NFV5 336 aaPredicted RBP15.69■□□□□ 0.1
UCHL3-202ENST00000419068 EVX2Q03828 476 aa15.67■□□□□ 0.1
UCHL3-202ENST00000419068 PRKAR2AP13861 404 aaKnown RBP15.64■□□□□ 0.09
UCHL3-202ENST00000419068 PABPN1Q86U42 306 aaKnown RBP eCLIP15.62■□□□□ 0.09
UCHL3-202ENST00000419068 CHADLQ6NUI6 762 aa15.55■□□□□ 0.08
UCHL3-202ENST00000419068 PRR29P0C7W0 189 aa15.44■□□□□ 0.06
UCHL3-202ENST00000419068 C19orf67A6NJJ6 358 aa15.39■□□□□ 0.05
UCHL3-202ENST00000419068 SPDYE4A6NLX3 237 aa15.23■□□□□ 0.03
UCHL3-202ENST00000419068 FARP1Q9Y4F1 1045 aaPredicted RBP15.21■□□□□ 0.03
UCHL3-202ENST00000419068 GABBR2O75899 941 aa15.2■□□□□ 0.02
UCHL3-202ENST00000419068 CD44P16070 742 aaKnown RBP15.14■□□□□ 0.01
UCHL3-202ENST00000419068 CREBZFQ9NS37 354 aa15.12■□□□□ 0.01
UCHL3-202ENST00000419068 LHX8Q68G74 356 aa15.06■□□□□ 0
UCHL3-202ENST00000419068 STAG3Q9UJ98 1225 aa15.03■□□□□ -0
UCHL3-202ENST00000419068 POTEIP0CG38 1075 aa14.96□□□□□ -0.01
UCHL3-202ENST00000419068 ZRANB1Q9UGI0 708 aa14.92□□□□□ -0.02
UCHL3-202ENST00000419068 MNX1P50219 401 aaPredicted RBP14.87□□□□□ -0.03
UCHL3-202ENST00000419068 ZNF579Q8NAF0 562 aaKnown RBP14.86□□□□□ -0.03
UCHL3-202ENST00000419068 PROM2Q8N271 834 aa14.85□□□□□ -0.03
UCHL3-202ENST00000419068 GALR2O43603 387 aaPredicted RBP14.78□□□□□ -0.04
UCHL3-202ENST00000419068 PHF12Q96QT6 1004 aa14.78□□□□□ -0.04
UCHL3-202ENST00000419068 DCBLD2Q96PD2 775 aa14.72□□□□□ -0.05
UCHL3-202ENST00000419068 NPM1P06748 294 aaKnown RBP eCLIP14.7□□□□□ -0.06
UCHL3-202ENST00000419068 CLCN6P51797 869 aa14.7□□□□□ -0.06
UCHL3-202ENST00000419068 PLSCR2Q9NRY7 297 aa14.7□□□□□ -0.06
UCHL3-202ENST00000419068 PAK3O75914 559 aaPredicted RBP14.66□□□□□ -0.06
UCHL3-202ENST00000419068 TSPYL2Q9H2G4 693 aaPredicted RBP14.59□□□□□ -0.07
UCHL3-202ENST00000419068 MS4A3Q96HJ5 214 aa14.56□□□□□ -0.08
UCHL3-202ENST00000419068 PELP1Q8IZL8 1130 aaKnown RBP14.54□□□□□ -0.08
UCHL3-202ENST00000419068 MIER1Q8N108 512 aa14.52□□□□□ -0.09
UCHL3-202ENST00000419068 POTEB2H3BUK9 544 aa14.49□□□□□ -0.09
UCHL3-202ENST00000419068 FKBP8Q14318 412 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms