RNA–Protein interactions for RNA: ENST00000416796.5

LRRK2-203, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 3

Gene LRRK2, Length 1,655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-203ENST00000416796 CHIC1Q5VXU3 224 aa21.44■■□□□ 1.02
LRRK2-203ENST00000416796 AEBP2Q6ZN18 517 aaPredicted RBP21.35■■□□□ 1.01
LRRK2-203ENST00000416796 PHF23Q9BUL5 403 aaPredicted RBP18.89■□□□□ 0.61
LRRK2-203ENST00000416796 SENP3Q9H4L4 574 aaPredicted RBP18.1■□□□□ 0.49
LRRK2-203ENST00000416796 PLPPR3Q6T4P5 718 aa17.74■□□□□ 0.43
LRRK2-203ENST00000416796 FOXD1Q16676 465 aa16.69■□□□□ 0.26
LRRK2-203ENST00000416796 ADRA2BP18089 450 aa16.58■□□□□ 0.24
LRRK2-203ENST00000416796 PPP6R1Q9UPN7 881 aa16.5■□□□□ 0.23
LRRK2-203ENST00000416796 KCNA4P22459 653 aa15.99■□□□□ 0.15
LRRK2-203ENST00000416796 PIAS4Q8N2W9 510 aaPredicted RBP15.98■□□□□ 0.15
LRRK2-203ENST00000416796 EHMT2Q96KQ7 1210 aa15.7■□□□□ 0.1
LRRK2-203ENST00000416796 PPP4R3CPQ6ZMV5 832 aa15.69■□□□□ 0.1
LRRK2-203ENST00000416796 NCBP3Q53F19 620 aaKnown RBP15.51■□□□□ 0.07
LRRK2-203ENST00000416796 SLC4A1APQ9BWU0 796 aaKnown RBP15.38■□□□□ 0.05
LRRK2-203ENST00000416796 SCAF1Q9H7N4 1312 aaKnown RBP15.22■□□□□ 0.03
LRRK2-203ENST00000416796 MSH5O43196 834 aa15.21■□□□□ 0.03
LRRK2-203ENST00000416796 NPM3O75607 178 aaKnown RBP15.2■□□□□ 0.02
LRRK2-203ENST00000416796 CNKSR2Q8WXI2 1034 aa15.12■□□□□ 0.01
LRRK2-203ENST00000416796 CSRNP3Q8WYN3 585 aa15.09■□□□□ 0.01
LRRK2-203ENST00000416796 MAPK8IP2Q13387 824 aaPredicted RBP14.86□□□□□ -0.03
LRRK2-203ENST00000416796 ZBTB22O15209 634 aa14.68□□□□□ -0.06
LRRK2-203ENST00000416796 RNF216Q9NWF9 866 aaPredicted RBP14.66□□□□□ -0.06
LRRK2-203ENST00000416796 FOXD4L1Q9NU39 408 aa14.56□□□□□ -0.08
LRRK2-203ENST00000416796 DNAJC5BQ9UF47 199 aa14.52□□□□□ -0.09
LRRK2-203ENST00000416796 DMRT2Q9Y5R5 561 aa14.5□□□□□ -0.09
LRRK2-203ENST00000416796 HOXD11P31277 338 aaPredicted RBP14.39□□□□□ -0.11
LRRK2-203ENST00000416796 SLC4A2P04920 1241 aa14.17□□□□□ -0.14
LRRK2-203ENST00000416796 MYCNP04198 464 aaPredicted RBP14.07□□□□□ -0.16
LRRK2-203ENST00000416796 DCAF8L1A6NGE4 600 aa14.04□□□□□ -0.16
LRRK2-203ENST00000416796 ATXN8OSP0DMR3 200 aa13.95□□□□□ -0.18
LRRK2-203ENST00000416796 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.88□□□□□ -0.19
LRRK2-203ENST00000416796 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.72□□□□□ -0.21
LRRK2-203ENST00000416796 HNRNPUL2Q1KMD3 747 aaKnown RBP13.72□□□□□ -0.21
LRRK2-203ENST00000416796 FKBP8Q14318 412 aa13.71□□□□□ -0.21
LRRK2-203ENST00000416796 SAMD1Q6SPF0 538 aaPredicted RBP13.68□□□□□ -0.22
LRRK2-203ENST00000416796 ATF5Q9Y2D1 282 aaPredicted RBP13.61□□□□□ -0.23
LRRK2-203ENST00000416796 U3KPZ7 1027 aaPredicted RBP13.61□□□□□ -0.23
LRRK2-203ENST00000416796 AMER1Q5JTC6 1135 aaPredicted RBP13.5□□□□□ -0.25
LRRK2-203ENST00000416796 RTN4Q9NQC3 1192 aaKnown RBP13.47□□□□□ -0.25
LRRK2-203ENST00000416796 APLP2Q06481 763 aa13.45□□□□□ -0.26
LRRK2-203ENST00000416796 ZNF219Q9P2Y4 722 aaPredicted RBP13.37□□□□□ -0.27
LRRK2-203ENST00000416796 TRHP20396 242 aaPredicted RBP13.18□□□□□ -0.3
LRRK2-203ENST00000416796 SLC24A1O60721 1099 aa13.16□□□□□ -0.3
LRRK2-203ENST00000416796 SPDYE4A6NLX3 237 aa13.12□□□□□ -0.31
LRRK2-203ENST00000416796 FBLN2P98095 1184 aa13.11□□□□□ -0.31
LRRK2-203ENST00000416796 CAPN15O75808 1086 aa13.1□□□□□ -0.31
LRRK2-203ENST00000416796 SPINK5Q9NQ38 1064 aaPredicted RBP13.09□□□□□ -0.31
LRRK2-203ENST00000416796 FBXO3Q9UK99 471 aa13.05□□□□□ -0.32
LRRK2-203ENST00000416796 POLA2Q14181 598 aa13.05□□□□□ -0.32
LRRK2-203ENST00000416796 RNF39Q9H2S5 420 aa13.04□□□□□ -0.32
LRRK2-203ENST00000416796 MKRN4PQ13434 485 aaPredicted RBP13.02□□□□□ -0.32
LRRK2-203ENST00000416796 C1QBPQ07021 282 aaKnown RBP12.94□□□□□ -0.34
LRRK2-203ENST00000416796 ABCB7O75027 752 aa12.89□□□□□ -0.35
LRRK2-203ENST00000416796 ZBTB12Q9Y330 459 aaPredicted RBP12.88□□□□□ -0.35
LRRK2-203ENST00000416796 VASPP50552 380 aaPredicted RBP12.83□□□□□ -0.35
LRRK2-203ENST00000416796 PROM2Q8N271 834 aa12.82□□□□□ -0.36
LRRK2-203ENST00000416796 POTEDQ86YR6 584 aa12.79□□□□□ -0.36
LRRK2-203ENST00000416796 IFNLR1Q8IU57 520 aaPredicted RBP12.67□□□□□ -0.38
LRRK2-203ENST00000416796 DCAF8L2P0C7V8 631 aa12.66□□□□□ -0.38
LRRK2-203ENST00000416796 ZNF692Q9BU19 519 aaPredicted RBP12.64□□□□□ -0.39
LRRK2-203ENST00000416796 DSG3P32926 999 aa12.62□□□□□ -0.39
LRRK2-203ENST00000416796 KLHL34Q8N239 644 aa12.59□□□□□ -0.39
LRRK2-203ENST00000416796 OSCARQ8IYS5 282 aa12.58□□□□□ -0.4
LRRK2-203ENST00000416796 SPDYE2BA6NHP3 402 aa12.54□□□□□ -0.4
LRRK2-203ENST00000416796 SPDYE6P0CI01 402 aa12.54□□□□□ -0.4
LRRK2-203ENST00000416796 SPDYE2Q495Y8 402 aa12.54□□□□□ -0.4
LRRK2-203ENST00000416796 STAG3Q9UJ98 1225 aa12.51□□□□□ -0.41
LRRK2-203ENST00000416796 PLCD3Q8N3E9 789 aa12.5□□□□□ -0.41
LRRK2-203ENST00000416796 PABPN1Q86U42 306 aaKnown RBP eCLIP12.48□□□□□ -0.41
LRRK2-203ENST00000416796 SPOCK2Q92563 424 aa12.47□□□□□ -0.41
LRRK2-203ENST00000416796 SSUH2Q9Y2M2 353 aa12.45□□□□□ -0.42
LRRK2-203ENST00000416796 PLCB2Q00722 1185 aa12.45□□□□□ -0.42
LRRK2-203ENST00000416796 PKD2Q13563 968 aa12.45□□□□□ -0.42
LRRK2-203ENST00000416796 MIER1Q8N108 512 aa12.42□□□□□ -0.42
LRRK2-203ENST00000416796 CACNB1Q02641 598 aaPredicted RBP12.38□□□□□ -0.43
LRRK2-203ENST00000416796 ECM2O94769 699 aaPredicted RBP12.37□□□□□ -0.43
LRRK2-203ENST00000416796 PLEKHG5O94827 1062 aa12.37□□□□□ -0.43
LRRK2-203ENST00000416796 HAP1P54257 671 aaPredicted RBP12.36□□□□□ -0.43
LRRK2-203ENST00000416796 ZBTB47Q9UFB7 747 aaPredicted RBP12.28□□□□□ -0.44
LRRK2-203ENST00000416796 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.26□□□□□ -0.45
LRRK2-203ENST00000416796 CIZ1Q9ULV3 898 aaPredicted RBP12.26□□□□□ -0.45
LRRK2-203ENST00000416796 BBXQ8WY36 941 aaPredicted RBP12.18□□□□□ -0.46
LRRK2-203ENST00000416796 RGL2O15211 777 aa12.17□□□□□ -0.46
LRRK2-203ENST00000416796 CFAP44Q96MT7 982 aa12.14□□□□□ -0.47
LRRK2-203ENST00000416796 PAXIP1Q6ZW49 1069 aaPredicted RBP12.13□□□□□ -0.47
LRRK2-203ENST00000416796 NPM1P06748 294 aaKnown RBP eCLIP12.1□□□□□ -0.47
LRRK2-203ENST00000416796 VSIG10Q8N0Z9 540 aa12.08□□□□□ -0.48
LRRK2-203ENST00000416796 RBM42Q9BTD8 480 aaKnown RBP12.08□□□□□ -0.48
LRRK2-203ENST00000416796 CHGAP10645 457 aaKnown RBP12.07□□□□□ -0.48
LRRK2-203ENST00000416796 SPDYE1Q8NFV5 336 aaPredicted RBP12.06□□□□□ -0.48
LRRK2-203ENST00000416796 CLEC11AQ9Y240 323 aa12.06□□□□□ -0.48
LRRK2-203ENST00000416796 TRIM41Q8WV44 630 aa12.06□□□□□ -0.48
LRRK2-203ENST00000416796 GSE1Q14687 1217 aa12.03□□□□□ -0.48
LRRK2-203ENST00000416796 SPRYD3Q8NCJ5 442 aa12.03□□□□□ -0.48
LRRK2-203ENST00000416796 BCANQ96GW7 911 aa12.02□□□□□ -0.49
LRRK2-203ENST00000416796 AKT1S1Q96B36 256 aa12.01□□□□□ -0.49
LRRK2-203ENST00000416796 PRR29P0C7W0 189 aa12□□□□□ -0.49
LRRK2-203ENST00000416796 DCAF8Q5TAQ9 597 aa11.99□□□□□ -0.49
LRRK2-203ENST00000416796 FAM212AQ96EL1 285 aa11.92□□□□□ -0.5
LRRK2-203ENST00000416796 NUBP1P53384 320 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms