RNA–Protein interactions for RNA: ENST00000416466.2

TMEM247-202, Transcript of transmembrane protein 247, humanhuman

TSL 2

Gene TMEM247, Length 474 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM247-202ENST00000416466 AEBP2Q6ZN18 517 aaPredicted RBP28.85■■■□□ 2.21
TMEM247-202ENST00000416466 CHIC1Q5VXU3 224 aa27.61■■■□□ 2.01
TMEM247-202ENST00000416466 SENP3Q9H4L4 574 aaPredicted RBP24.45■■□□□ 1.5
TMEM247-202ENST00000416466 PHF23Q9BUL5 403 aaPredicted RBP24.3■■□□□ 1.48
TMEM247-202ENST00000416466 FOXD1Q16676 465 aa22.82■■□□□ 1.24
TMEM247-202ENST00000416466 PLPPR3Q6T4P5 718 aa22.13■■□□□ 1.13
TMEM247-202ENST00000416466 PPP6R1Q9UPN7 881 aa21.61■■□□□ 1.05
TMEM247-202ENST00000416466 ADRA2BP18089 450 aa21.51■■□□□ 1.03
TMEM247-202ENST00000416466 PIAS4Q8N2W9 510 aaPredicted RBP21.32■■□□□ 1
TMEM247-202ENST00000416466 MSH5O43196 834 aa21.15■□□□□ 0.98
TMEM247-202ENST00000416466 POTEDQ86YR6 584 aa20.27■□□□□ 0.84
TMEM247-202ENST00000416466 MAPK8IP2Q13387 824 aaPredicted RBP19.69■□□□□ 0.74
TMEM247-202ENST00000416466 SCAF1Q9H7N4 1312 aaKnown RBP19.54■□□□□ 0.72
TMEM247-202ENST00000416466 PPP4R3CPQ6ZMV5 832 aa19.47■□□□□ 0.71
TMEM247-202ENST00000416466 DMRT2Q9Y5R5 561 aa19.47■□□□□ 0.71
TMEM247-202ENST00000416466 CNKSR2Q8WXI2 1034 aa19.01■□□□□ 0.63
TMEM247-202ENST00000416466 HOXD11P31277 338 aaPredicted RBP18.88■□□□□ 0.61
TMEM247-202ENST00000416466 RNF216Q9NWF9 866 aaPredicted RBP18.78■□□□□ 0.6
TMEM247-202ENST00000416466 NCBP3Q53F19 620 aaKnown RBP18.72■□□□□ 0.59
TMEM247-202ENST00000416466 DCAF8L1A6NGE4 600 aa18.55■□□□□ 0.56
TMEM247-202ENST00000416466 NPM3O75607 178 aaKnown RBP18.55■□□□□ 0.56
TMEM247-202ENST00000416466 KCNA4P22459 653 aa18.46■□□□□ 0.55
TMEM247-202ENST00000416466 DNAJC5BQ9UF47 199 aa18.16■□□□□ 0.5
TMEM247-202ENST00000416466 RNF39Q9H2S5 420 aa18.15■□□□□ 0.5
TMEM247-202ENST00000416466 CACNB1Q02641 598 aaPredicted RBP17.97■□□□□ 0.47
TMEM247-202ENST00000416466 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.9■□□□□ 0.46
TMEM247-202ENST00000416466 C1QBPQ07021 282 aaKnown RBP17.85■□□□□ 0.45
TMEM247-202ENST00000416466 SLC4A2P04920 1241 aa17.69■□□□□ 0.42
TMEM247-202ENST00000416466 U3KPZ7 1027 aaPredicted RBP17.64■□□□□ 0.41
TMEM247-202ENST00000416466 SLC4A1APQ9BWU0 796 aaKnown RBP17.42■□□□□ 0.38
TMEM247-202ENST00000416466 SPINK5Q9NQ38 1064 aaPredicted RBP17.31■□□□□ 0.36
TMEM247-202ENST00000416466 CAPN15O75808 1086 aa17.17■□□□□ 0.34
TMEM247-202ENST00000416466 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.12■□□□□ 0.33
TMEM247-202ENST00000416466 HNRNPUL2Q1KMD3 747 aaKnown RBP17.12■□□□□ 0.33
TMEM247-202ENST00000416466 MYCNP04198 464 aaPredicted RBP17.1■□□□□ 0.33
TMEM247-202ENST00000416466 DSG3P32926 999 aa17.09■□□□□ 0.33
TMEM247-202ENST00000416466 FOXD4L1Q9NU39 408 aa17.08■□□□□ 0.32
TMEM247-202ENST00000416466 SAMD1Q6SPF0 538 aaPredicted RBP17.06■□□□□ 0.32
TMEM247-202ENST00000416466 ZBTB22O15209 634 aa17.03■□□□□ 0.32
TMEM247-202ENST00000416466 APLP2Q06481 763 aa17.02■□□□□ 0.32
TMEM247-202ENST00000416466 TRHP20396 242 aaPredicted RBP16.97■□□□□ 0.31
TMEM247-202ENST00000416466 ZNF219Q9P2Y4 722 aaPredicted RBP16.94■□□□□ 0.3
TMEM247-202ENST00000416466 ABCB7O75027 752 aa16.84■□□□□ 0.29
TMEM247-202ENST00000416466 ATF5Q9Y2D1 282 aaPredicted RBP16.78■□□□□ 0.28
TMEM247-202ENST00000416466 POLA2Q14181 598 aa16.62■□□□□ 0.25
TMEM247-202ENST00000416466 ATXN8OSP0DMR3 200 aa16.54■□□□□ 0.24
TMEM247-202ENST00000416466 CSRNP3Q8WYN3 585 aa16.47■□□□□ 0.23
TMEM247-202ENST00000416466 EHMT2Q96KQ7 1210 aa16.32■□□□□ 0.2
TMEM247-202ENST00000416466 ZBTB12Q9Y330 459 aaPredicted RBP16.23■□□□□ 0.19
TMEM247-202ENST00000416466 RBM42Q9BTD8 480 aaKnown RBP16.2■□□□□ 0.18
TMEM247-202ENST00000416466 OSCARQ8IYS5 282 aa16.08■□□□□ 0.16
TMEM247-202ENST00000416466 MKRN4PQ13434 485 aaPredicted RBP16.02■□□□□ 0.16
TMEM247-202ENST00000416466 FBLN2P98095 1184 aa15.96■□□□□ 0.15
TMEM247-202ENST00000416466 AKT1S1Q96B36 256 aa15.94■□□□□ 0.14
TMEM247-202ENST00000416466 POTEHQ6S545 545 aa15.89■□□□□ 0.13
TMEM247-202ENST00000416466 REM2Q8IYK8 340 aaPredicted RBP15.82■□□□□ 0.12
TMEM247-202ENST00000416466 SPDYE2BA6NHP3 402 aa15.81■□□□□ 0.12
TMEM247-202ENST00000416466 SPDYE6P0CI01 402 aa15.81■□□□□ 0.12
TMEM247-202ENST00000416466 SPDYE2Q495Y8 402 aa15.81■□□□□ 0.12
TMEM247-202ENST00000416466 CHRDL2Q6WN34 429 aa15.79■□□□□ 0.12
TMEM247-202ENST00000416466 SSUH2Q9Y2M2 353 aa15.68■□□□□ 0.1
TMEM247-202ENST00000416466 ZNF692Q9BU19 519 aaPredicted RBP15.65■□□□□ 0.1
TMEM247-202ENST00000416466 PITPNM1O00562 1244 aa15.64■□□□□ 0.09
TMEM247-202ENST00000416466 PIP4P2Q8N4L2 257 aa15.51■□□□□ 0.07
TMEM247-202ENST00000416466 FXR2P51116 673 aaKnown RBP eCLIP15.48■□□□□ 0.07
TMEM247-202ENST00000416466 PABPN1Q86U42 306 aaKnown RBP eCLIP15.45■□□□□ 0.06
TMEM247-202ENST00000416466 SPDYE1Q8NFV5 336 aaPredicted RBP15.44■□□□□ 0.06
TMEM247-202ENST00000416466 CLEC11AQ9Y240 323 aa15.38■□□□□ 0.05
TMEM247-202ENST00000416466 SPDYE4A6NLX3 237 aa15.32■□□□□ 0.04
TMEM247-202ENST00000416466 PRKAR2AP13861 404 aaKnown RBP15.21■□□□□ 0.03
TMEM247-202ENST00000416466 PRR29P0C7W0 189 aa15.18■□□□□ 0.02
TMEM247-202ENST00000416466 CHADLQ6NUI6 762 aa15.13■□□□□ 0.01
TMEM247-202ENST00000416466 PROM2Q8N271 834 aa15.09■□□□□ 0.01
TMEM247-202ENST00000416466 HAX1O00165 279 aa15.08■□□□□ 0
TMEM247-202ENST00000416466 EVX2Q03828 476 aa15.05■□□□□ -0
TMEM247-202ENST00000416466 STAG3Q9UJ98 1225 aa15.03■□□□□ -0
TMEM247-202ENST00000416466 SP7Q8TDD2 431 aaPredicted RBP15.02■□□□□ -0
TMEM247-202ENST00000416466 C19orf67A6NJJ6 358 aa14.96□□□□□ -0.01
TMEM247-202ENST00000416466 CREBZFQ9NS37 354 aa14.95□□□□□ -0.02
TMEM247-202ENST00000416466 FARP1Q9Y4F1 1045 aaPredicted RBP14.92□□□□□ -0.02
TMEM247-202ENST00000416466 FKBP8Q14318 412 aa14.84□□□□□ -0.03
TMEM247-202ENST00000416466 MNX1P50219 401 aaPredicted RBP14.78□□□□□ -0.04
TMEM247-202ENST00000416466 CD44P16070 742 aaKnown RBP14.73□□□□□ -0.05
TMEM247-202ENST00000416466 GABBR2O75899 941 aa14.66□□□□□ -0.06
TMEM247-202ENST00000416466 NPM1P06748 294 aaKnown RBP eCLIP14.58□□□□□ -0.08
TMEM247-202ENST00000416466 ZRANB1Q9UGI0 708 aa14.57□□□□□ -0.08
TMEM247-202ENST00000416466 ZNF579Q8NAF0 562 aaKnown RBP14.56□□□□□ -0.08
TMEM247-202ENST00000416466 MIER1Q8N108 512 aa14.55□□□□□ -0.08
TMEM247-202ENST00000416466 CLCN6P51797 869 aa14.45□□□□□ -0.1
TMEM247-202ENST00000416466 PLCD3Q8N3E9 789 aa14.44□□□□□ -0.1
TMEM247-202ENST00000416466 PHF12Q96QT6 1004 aa14.43□□□□□ -0.1
TMEM247-202ENST00000416466 PAK3O75914 559 aaPredicted RBP14.42□□□□□ -0.1
TMEM247-202ENST00000416466 PLEKHG5O94827 1062 aa14.42□□□□□ -0.1
TMEM247-202ENST00000416466 POTEIP0CG38 1075 aa14.41□□□□□ -0.1
TMEM247-202ENST00000416466 FBXO3Q9UK99 471 aa14.39□□□□□ -0.11
TMEM247-202ENST00000416466 GALR2O43603 387 aaPredicted RBP14.38□□□□□ -0.11
TMEM247-202ENST00000416466 RASEFQ8IZ41 740 aa14.37□□□□□ -0.11
TMEM247-202ENST00000416466 TSPYL2Q9H2G4 693 aaPredicted RBP14.37□□□□□ -0.11
TMEM247-202ENST00000416466 CCDC61Q9Y6R9 512 aa14.35□□□□□ -0.11
TMEM247-202ENST00000416466 NUBP1P53384 320 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms