RNA–Protein interactions for RNA: ENST00000414255.1

ZNF440-202, Transcript of zinc finger protein 440, humanhuman

TSL 2

Gene ZNF440, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-202ENST00000414255 AEBP2Q6ZN18 517 aaPredicted RBP24.4■■□□□ 1.5
ZNF440-202ENST00000414255 CHIC1Q5VXU3 224 aa23.33■■□□□ 1.33
ZNF440-202ENST00000414255 SENP3Q9H4L4 574 aaPredicted RBP20.94■□□□□ 0.94
ZNF440-202ENST00000414255 PHF23Q9BUL5 403 aaPredicted RBP20.61■□□□□ 0.89
ZNF440-202ENST00000414255 FOXD1Q16676 465 aa19.42■□□□□ 0.7
ZNF440-202ENST00000414255 PLPPR3Q6T4P5 718 aa18.72■□□□□ 0.59
ZNF440-202ENST00000414255 MSH5O43196 834 aa18.26■□□□□ 0.51
ZNF440-202ENST00000414255 PIAS4Q8N2W9 510 aaPredicted RBP18.2■□□□□ 0.5
ZNF440-202ENST00000414255 PPP6R1Q9UPN7 881 aa18.15■□□□□ 0.5
ZNF440-202ENST00000414255 ADRA2BP18089 450 aa18.11■□□□□ 0.49
ZNF440-202ENST00000414255 POTEDQ86YR6 584 aa17.62■□□□□ 0.41
ZNF440-202ENST00000414255 SCAF1Q9H7N4 1312 aaKnown RBP16.73■□□□□ 0.27
ZNF440-202ENST00000414255 MAPK8IP2Q13387 824 aaPredicted RBP16.59■□□□□ 0.25
ZNF440-202ENST00000414255 DMRT2Q9Y5R5 561 aa16.59■□□□□ 0.25
ZNF440-202ENST00000414255 PPP4R3CPQ6ZMV5 832 aa16.36■□□□□ 0.21
ZNF440-202ENST00000414255 CNKSR2Q8WXI2 1034 aa16.08■□□□□ 0.16
ZNF440-202ENST00000414255 HOXD11P31277 338 aaPredicted RBP16.01■□□□□ 0.15
ZNF440-202ENST00000414255 RNF216Q9NWF9 866 aaPredicted RBP15.92■□□□□ 0.14
ZNF440-202ENST00000414255 DCAF8L1A6NGE4 600 aa15.88■□□□□ 0.13
ZNF440-202ENST00000414255 NCBP3Q53F19 620 aaKnown RBP15.83■□□□□ 0.12
ZNF440-202ENST00000414255 CACNB1Q02641 598 aaPredicted RBP15.58■□□□□ 0.08
ZNF440-202ENST00000414255 RNF39Q9H2S5 420 aa15.53■□□□□ 0.08
ZNF440-202ENST00000414255 DNAJC5BQ9UF47 199 aa15.53■□□□□ 0.08
ZNF440-202ENST00000414255 NPM3O75607 178 aaKnown RBP15.51■□□□□ 0.07
ZNF440-202ENST00000414255 C1QBPQ07021 282 aaKnown RBP15.36■□□□□ 0.05
ZNF440-202ENST00000414255 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.25■□□□□ 0.03
ZNF440-202ENST00000414255 KCNA4P22459 653 aa15.23■□□□□ 0.03
ZNF440-202ENST00000414255 U3KPZ7 1027 aaPredicted RBP14.9□□□□□ -0.02
ZNF440-202ENST00000414255 SLC4A2P04920 1241 aa14.76□□□□□ -0.05
ZNF440-202ENST00000414255 CAPN15O75808 1086 aa14.66□□□□□ -0.06
ZNF440-202ENST00000414255 APLP2Q06481 763 aa14.66□□□□□ -0.06
ZNF440-202ENST00000414255 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.63□□□□□ -0.07
ZNF440-202ENST00000414255 HNRNPUL2Q1KMD3 747 aaKnown RBP14.63□□□□□ -0.07
ZNF440-202ENST00000414255 SPINK5Q9NQ38 1064 aaPredicted RBP14.63□□□□□ -0.07
ZNF440-202ENST00000414255 DSG3P32926 999 aa14.54□□□□□ -0.08
ZNF440-202ENST00000414255 SAMD1Q6SPF0 538 aaPredicted RBP14.52□□□□□ -0.09
ZNF440-202ENST00000414255 ZNF219Q9P2Y4 722 aaPredicted RBP14.48□□□□□ -0.09
ZNF440-202ENST00000414255 SLC4A1APQ9BWU0 796 aaKnown RBP14.45□□□□□ -0.1
ZNF440-202ENST00000414255 TRHP20396 242 aaPredicted RBP14.42□□□□□ -0.1
ZNF440-202ENST00000414255 MYCNP04198 464 aaPredicted RBP14.41□□□□□ -0.1
ZNF440-202ENST00000414255 ABCB7O75027 752 aa14.28□□□□□ -0.12
ZNF440-202ENST00000414255 FOXD4L1Q9NU39 408 aa14.28□□□□□ -0.12
ZNF440-202ENST00000414255 POLA2Q14181 598 aa14.05□□□□□ -0.16
ZNF440-202ENST00000414255 RBM42Q9BTD8 480 aaKnown RBP13.99□□□□□ -0.17
ZNF440-202ENST00000414255 ZBTB22O15209 634 aa13.97□□□□□ -0.17
ZNF440-202ENST00000414255 ATF5Q9Y2D1 282 aaPredicted RBP13.94□□□□□ -0.18
ZNF440-202ENST00000414255 ZBTB12Q9Y330 459 aaPredicted RBP13.9□□□□□ -0.18
ZNF440-202ENST00000414255 ATXN8OSP0DMR3 200 aa13.88□□□□□ -0.19
ZNF440-202ENST00000414255 POTEHQ6S545 545 aa13.84□□□□□ -0.19
ZNF440-202ENST00000414255 AKT1S1Q96B36 256 aa13.63□□□□□ -0.23
ZNF440-202ENST00000414255 OSCARQ8IYS5 282 aa13.59□□□□□ -0.23
ZNF440-202ENST00000414255 CHRDL2Q6WN34 429 aa13.57□□□□□ -0.24
ZNF440-202ENST00000414255 FBLN2P98095 1184 aa13.54□□□□□ -0.24
ZNF440-202ENST00000414255 REM2Q8IYK8 340 aaPredicted RBP13.45□□□□□ -0.26
ZNF440-202ENST00000414255 SPDYE2BA6NHP3 402 aa13.43□□□□□ -0.26
ZNF440-202ENST00000414255 SPDYE6P0CI01 402 aa13.43□□□□□ -0.26
ZNF440-202ENST00000414255 SPDYE2Q495Y8 402 aa13.43□□□□□ -0.26
ZNF440-202ENST00000414255 CSRNP3Q8WYN3 585 aa13.42□□□□□ -0.26
ZNF440-202ENST00000414255 MKRN4PQ13434 485 aaPredicted RBP13.33□□□□□ -0.28
ZNF440-202ENST00000414255 PITPNM1O00562 1244 aa13.3□□□□□ -0.28
ZNF440-202ENST00000414255 EHMT2Q96KQ7 1210 aa13.27□□□□□ -0.29
ZNF440-202ENST00000414255 PIP4P2Q8N4L2 257 aa13.24□□□□□ -0.29
ZNF440-202ENST00000414255 ZNF692Q9BU19 519 aaPredicted RBP13.23□□□□□ -0.29
ZNF440-202ENST00000414255 SSUH2Q9Y2M2 353 aa13.22□□□□□ -0.29
ZNF440-202ENST00000414255 FXR2P51116 673 aaKnown RBP eCLIP13.19□□□□□ -0.3
ZNF440-202ENST00000414255 SPDYE1Q8NFV5 336 aaPredicted RBP13.17□□□□□ -0.3
ZNF440-202ENST00000414255 CLEC11AQ9Y240 323 aa13.09□□□□□ -0.31
ZNF440-202ENST00000414255 PABPN1Q86U42 306 aaKnown RBP eCLIP13.02□□□□□ -0.33
ZNF440-202ENST00000414255 SP7Q8TDD2 431 aaPredicted RBP13.02□□□□□ -0.33
ZNF440-202ENST00000414255 HAX1O00165 279 aa13□□□□□ -0.33
ZNF440-202ENST00000414255 PRKAR2AP13861 404 aaKnown RBP12.97□□□□□ -0.33
ZNF440-202ENST00000414255 PRR29P0C7W0 189 aa12.91□□□□□ -0.34
ZNF440-202ENST00000414255 SPDYE4A6NLX3 237 aa12.79□□□□□ -0.36
ZNF440-202ENST00000414255 CHADLQ6NUI6 762 aa12.79□□□□□ -0.36
ZNF440-202ENST00000414255 STAG3Q9UJ98 1225 aa12.78□□□□□ -0.36
ZNF440-202ENST00000414255 C19orf67A6NJJ6 358 aa12.77□□□□□ -0.37
ZNF440-202ENST00000414255 EVX2Q03828 476 aa12.74□□□□□ -0.37
ZNF440-202ENST00000414255 FARP1Q9Y4F1 1045 aaPredicted RBP12.66□□□□□ -0.38
ZNF440-202ENST00000414255 CD44P16070 742 aaKnown RBP12.58□□□□□ -0.4
ZNF440-202ENST00000414255 CREBZFQ9NS37 354 aa12.56□□□□□ -0.4
ZNF440-202ENST00000414255 GABBR2O75899 941 aa12.55□□□□□ -0.4
ZNF440-202ENST00000414255 CLCN6P51797 869 aa12.52□□□□□ -0.41
ZNF440-202ENST00000414255 PROM2Q8N271 834 aa12.5□□□□□ -0.41
ZNF440-202ENST00000414255 NPM1P06748 294 aaKnown RBP eCLIP12.43□□□□□ -0.42
ZNF440-202ENST00000414255 PAK3O75914 559 aaPredicted RBP12.4□□□□□ -0.42
ZNF440-202ENST00000414255 ZNF579Q8NAF0 562 aaKnown RBP12.4□□□□□ -0.42
ZNF440-202ENST00000414255 ZRANB1Q9UGI0 708 aa12.4□□□□□ -0.42
ZNF440-202ENST00000414255 MNX1P50219 401 aaPredicted RBP12.35□□□□□ -0.43
ZNF440-202ENST00000414255 PLEKHG5O94827 1062 aa12.29□□□□□ -0.44
ZNF440-202ENST00000414255 DCBLD2Q96PD2 775 aa12.27□□□□□ -0.45
ZNF440-202ENST00000414255 POTEIP0CG38 1075 aa12.23□□□□□ -0.45
ZNF440-202ENST00000414255 LHX8Q68G74 356 aa12.21□□□□□ -0.45
ZNF440-202ENST00000414255 MIER1Q8N108 512 aa12.2□□□□□ -0.46
ZNF440-202ENST00000414255 FKBP8Q14318 412 aa12.19□□□□□ -0.46
ZNF440-202ENST00000414255 PHF12Q96QT6 1004 aa12.19□□□□□ -0.46
ZNF440-202ENST00000414255 GALR2O43603 387 aaPredicted RBP12.18□□□□□ -0.46
ZNF440-202ENST00000414255 PLCD3Q8N3E9 789 aa12.14□□□□□ -0.47
ZNF440-202ENST00000414255 ZBTB47Q9UFB7 747 aaPredicted RBP12.12□□□□□ -0.47
ZNF440-202ENST00000414255 TSPYL2Q9H2G4 693 aaPredicted RBP12.11□□□□□ -0.47
ZNF440-202ENST00000414255 CCDC61Q9Y6R9 512 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms