RNA–Protein interactions for RNA: ENST00000413693.5

NEB-205, Transcript of nebulin, humanhuman

TSL 5

Gene NEB, Length 9,443 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-205ENST00000413693 MYT1Q01538 1121 aa12.19□□□□□ -0.46
NEB-205ENST00000413693 PELP1Q8IZL8 1130 aaKnown RBP11.94□□□□□ -0.5
NEB-205ENST00000413693 TTBK1Q5TCY1 1321 aaPredicted RBP11.47□□□□□ -0.57
NEB-205ENST00000413693 ERICH6Q7L0X2 663 aa10.88□□□□□ -0.67
NEB-205ENST00000413693 CCER1Q8TC90 406 aaPredicted RBP10.7□□□□□ -0.7
NEB-205ENST00000413693 YTHDC1Q96MU7 727 aaKnown RBP10.7□□□□□ -0.7
NEB-205ENST00000413693 CENPBP07199 599 aaPredicted RBP10.67□□□□□ -0.7
NEB-205ENST00000413693 ZEB1P37275 1124 aaPredicted RBP10.64□□□□□ -0.71
NEB-205ENST00000413693 MYT1LQ9UL68 1186 aa10.32□□□□□ -0.76
NEB-205ENST00000413693 CLSPNQ9HAW4 1339 aa10.21□□□□□ -0.78
NEB-205ENST00000413693 GLIPR1L2Q4G1C9 344 aa10.19□□□□□ -0.78
NEB-205ENST00000413693 RANGAP1P46060 587 aaPredicted RBP10.14□□□□□ -0.79
NEB-205ENST00000413693 HRCP23327 699 aa10.09□□□□□ -0.79
NEB-205ENST00000413693 NEFLP07196 543 aa10.07□□□□□ -0.8
NEB-205ENST00000413693 RTL5Q5HYW3 569 aaPredicted RBP9.93□□□□□ -0.82
NEB-205ENST00000413693 SLC24A1O60721 1099 aa9.9□□□□□ -0.82
NEB-205ENST00000413693 PCGF6Q9BYE7 350 aa9.85□□□□□ -0.83
NEB-205ENST00000413693 EHMT2Q96KQ7 1210 aa9.78□□□□□ -0.84
NEB-205ENST00000413693 DAXXQ9UER7 740 aaPredicted RBP9.76□□□□□ -0.85
NEB-205ENST00000413693 TRIM26Q12899 539 aaPredicted RBP9.75□□□□□ -0.85
NEB-205ENST00000413693 FAM9AQ8IZU1 332 aaPredicted RBP9.71□□□□□ -0.85
NEB-205ENST00000413693 NCLP19338 710 aaKnown RBP9.69□□□□□ -0.86
NEB-205ENST00000413693 ACIN1Q9UKV3 1341 aaKnown RBP9.63□□□□□ -0.87
NEB-205ENST00000413693 NISCHQ9Y2I1 1504 aa9.62□□□□□ -0.87
NEB-205ENST00000413693 EIF5BO60841 1220 aaKnown RBP9.6□□□□□ -0.87
NEB-205ENST00000413693 APLP2Q06481 763 aa9.6□□□□□ -0.87
NEB-205ENST00000413693 ERICH6BQ5W0A0 696 aa9.59□□□□□ -0.87
NEB-205ENST00000413693 ZNF316A6NFI3 1004 aaPredicted RBP9.56□□□□□ -0.88
NEB-205ENST00000413693 DCAF8L2P0C7V8 631 aa9.55□□□□□ -0.88
NEB-205ENST00000413693 ZNF326Q5BKZ1 582 aaKnown RBP9.54□□□□□ -0.88
NEB-205ENST00000413693 GTF3C3Q9Y5Q9 886 aa9.54□□□□□ -0.88
NEB-205ENST00000413693 ANP32EQ9BTT0 268 aa9.54□□□□□ -0.88
NEB-205ENST00000413693 BCL11AQ9H165 835 aa9.53□□□□□ -0.88
NEB-205ENST00000413693 TNNT2P45379 298 aaPredicted RBP9.52□□□□□ -0.88
NEB-205ENST00000413693 CDK11AQ9UQ88 783 aaPredicted RBP9.52□□□□□ -0.89
NEB-205ENST00000413693 DIEXFQ68CQ4 756 aaKnown RBP9.51□□□□□ -0.89
NEB-205ENST00000413693 TRIM44Q96DX7 344 aaPredicted RBP9.47□□□□□ -0.89
NEB-205ENST00000413693 SUPT5HO00267 1087 aaKnown RBP9.46□□□□□ -0.89
NEB-205ENST00000413693 ANP32AP39687 249 aaKnown RBP9.45□□□□□ -0.9
NEB-205ENST00000413693 POLR3GLQ9BT43 218 aa9.42□□□□□ -0.9
NEB-205ENST00000413693 ARID4BQ4LE39 1312 aaPredicted RBP9.41□□□□□ -0.9
NEB-205ENST00000413693 ANP32BQ92688 251 aaKnown RBP9.4□□□□□ -0.91
NEB-205ENST00000413693 DCAF1Q9Y4B6 1507 aa9.38□□□□□ -0.91
NEB-205ENST00000413693 PTMSP20962 102 aa9.36□□□□□ -0.91
NEB-205ENST00000413693 CCDC180Q9P1Z9 1646 aa9.35□□□□□ -0.91
NEB-205ENST00000413693 SCAF1Q9H7N4 1312 aaKnown RBP9.28□□□□□ -0.92
NEB-205ENST00000413693 CDK11BP21127 795 aaKnown RBP9.28□□□□□ -0.92
NEB-205ENST00000413693 RSPH6AQ9H0K4 717 aa9.22□□□□□ -0.93
NEB-205ENST00000413693 HMGB1P09429 215 aaKnown RBP9.2□□□□□ -0.94
NEB-205ENST00000413693 PPM1GO15355 546 aaPredicted RBP9.19□□□□□ -0.94
NEB-205ENST00000413693 PRKCSHP14314 528 aaPredicted RBP9.19□□□□□ -0.94
NEB-205ENST00000413693 LAS1LQ9Y4W2 734 aaKnown RBP9.19□□□□□ -0.94
NEB-205ENST00000413693 DDRGK1Q96HY6 314 aa9.17□□□□□ -0.94
NEB-205ENST00000413693 ZBTB47Q9UFB7 747 aaPredicted RBP9.17□□□□□ -0.94
NEB-205ENST00000413693 NEUROD1Q13562 356 aa9.14□□□□□ -0.95
NEB-205ENST00000413693 USP35Q9P2H5 1018 aa9.13□□□□□ -0.95
NEB-205ENST00000413693 CNGB1Q14028 1251 aaPredicted RBP9.11□□□□□ -0.95
NEB-205ENST00000413693 PPARGC1BQ86YN6 1023 aaKnown RBP9.09□□□□□ -0.95
NEB-205ENST00000413693 CALRP27797 417 aaKnown RBP9.08□□□□□ -0.96
NEB-205ENST00000413693 UPF2Q9HAU5 1272 aaKnown RBP9.08□□□□□ -0.96
NEB-205ENST00000413693 TRIM41Q8WV44 630 aa9.08□□□□□ -0.96
NEB-205ENST00000413693 L1TD1Q5T7N2 865 aaKnown RBP9.07□□□□□ -0.96
NEB-205ENST00000413693 ANP32CO43423 234 aa9.07□□□□□ -0.96
NEB-205ENST00000413693 HSP90AA1P07900 732 aaKnown RBP9.07□□□□□ -0.96
NEB-205ENST00000413693 NEFMP07197 916 aa9.06□□□□□ -0.96
NEB-205ENST00000413693 PODXL2Q9NZ53 605 aa9.06□□□□□ -0.96
NEB-205ENST00000413693 PKNOX2Q96KN3 472 aa9.05□□□□□ -0.96
NEB-205ENST00000413693 MTERF4Q7Z6M4 381 aaKnown RBP9.05□□□□□ -0.96
NEB-205ENST00000413693 MAP7D2Q96T17 732 aa9.02□□□□□ -0.97
NEB-205ENST00000413693 BECN1Q14457 450 aa9.01□□□□□ -0.97
NEB-205ENST00000413693 ARXQ96QS3 562 aa9.01□□□□□ -0.97
NEB-205ENST00000413693 A0A0U1RQG5 324 aaPredicted RBP9□□□□□ -0.97
NEB-205ENST00000413693 UBE2Q2Q8WVN8 375 aa8.99□□□□□ -0.97
NEB-205ENST00000413693 NOP58Q9Y2X3 529 aaKnown RBP8.99□□□□□ -0.97
NEB-205ENST00000413693 HSP90AA2PQ14568 343 aaPredicted RBP8.99□□□□□ -0.97
NEB-205ENST00000413693 DEKP35659 375 aaKnown RBP8.98□□□□□ -0.97
NEB-205ENST00000413693 TAF3Q5VWG9 929 aa8.98□□□□□ -0.97
NEB-205ENST00000413693 NAP1L5Q96NT1 182 aaPredicted RBP8.95□□□□□ -0.98
NEB-205ENST00000413693 HOMEZQ8IX15 550 aa8.95□□□□□ -0.98
NEB-205ENST00000413693 SHROOM4Q9ULL8 1493 aa8.94□□□□□ -0.98
NEB-205ENST00000413693 PNNQ9H307 717 aaKnown RBP8.94□□□□□ -0.98
NEB-205ENST00000413693 GOLGA6L22H0YM25 854 aa8.94□□□□□ -0.98
NEB-205ENST00000413693 CHIC1Q5VXU3 224 aa8.94□□□□□ -0.98
NEB-205ENST00000413693 GOLGA6L3A6NEY3 463 aa8.93□□□□□ -0.98
NEB-205ENST00000413693 FKBP8Q14318 412 aa8.92□□□□□ -0.98
NEB-205ENST00000413693 CHAF1AQ13111 956 aaPredicted RBP8.92□□□□□ -0.98
NEB-205ENST00000413693 NBR1Q14596 966 aa8.9□□□□□ -0.98
NEB-205ENST00000413693 FANCIQ9NVI1 1328 aa8.9□□□□□ -0.99
NEB-205ENST00000413693 CCDC136Q96JN2 1154 aa8.88□□□□□ -0.99
NEB-205ENST00000413693 RRP9O43818 475 aaKnown RBP8.87□□□□□ -0.99
NEB-205ENST00000413693 CSRNP3Q8WYN3 585 aa8.86□□□□□ -0.99
NEB-205ENST00000413693 TNNT3P45378 269 aaPredicted RBP8.85□□□□□ -0.99
NEB-205ENST00000413693 GOLGA6L6A8MZA4 724 aa8.85□□□□□ -0.99
NEB-205ENST00000413693 MSNP26038 577 aaKnown RBP8.84□□□□□ -0.99
NEB-205ENST00000413693 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.84□□□□□ -1
NEB-205ENST00000413693 BCANQ96GW7 911 aa8.84□□□□□ -1
NEB-205ENST00000413693 VSIG10Q8N0Z9 540 aa8.82□□□□□ -1
NEB-205ENST00000413693 TAF7LQ5H9L4 462 aa8.82□□□□□ -1
NEB-205ENST00000413693 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.82□□□□□ -1
NEB-205ENST00000413693 PTMAP06454 111 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms