RNA–Protein interactions for RNA: ENST00000412613.1

SYCP2-203, Transcript of synaptonemal complex protein 2, humanhuman

TSL 3

Gene SYCP2, Length 625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP2-203ENST00000412613 AEBP2Q6ZN18 517 aaPredicted RBP26.86■■□□□ 1.89
SYCP2-203ENST00000412613 CHIC1Q5VXU3 224 aa26.29■■□□□ 1.8
SYCP2-203ENST00000412613 PHF23Q9BUL5 403 aaPredicted RBP23.12■■□□□ 1.29
SYCP2-203ENST00000412613 SENP3Q9H4L4 574 aaPredicted RBP22.79■■□□□ 1.24
SYCP2-203ENST00000412613 PLPPR3Q6T4P5 718 aa21.37■■□□□ 1.01
SYCP2-203ENST00000412613 FOXD1Q16676 465 aa21.14■□□□□ 0.97
SYCP2-203ENST00000412613 PPP6R1Q9UPN7 881 aa20.38■□□□□ 0.85
SYCP2-203ENST00000412613 ADRA2BP18089 450 aa20.35■□□□□ 0.85
SYCP2-203ENST00000412613 PIAS4Q8N2W9 510 aaPredicted RBP19.92■□□□□ 0.78
SYCP2-203ENST00000412613 MSH5O43196 834 aa19.49■□□□□ 0.71
SYCP2-203ENST00000412613 PPP4R3CPQ6ZMV5 832 aa18.82■□□□□ 0.6
SYCP2-203ENST00000412613 SCAF1Q9H7N4 1312 aaKnown RBP18.65■□□□□ 0.58
SYCP2-203ENST00000412613 MAPK8IP2Q13387 824 aaPredicted RBP18.44■□□□□ 0.54
SYCP2-203ENST00000412613 KCNA4P22459 653 aa18.42■□□□□ 0.54
SYCP2-203ENST00000412613 NCBP3Q53F19 620 aaKnown RBP18.35■□□□□ 0.53
SYCP2-203ENST00000412613 CNKSR2Q8WXI2 1034 aa18.3■□□□□ 0.52
SYCP2-203ENST00000412613 DMRT2Q9Y5R5 561 aa18.21■□□□□ 0.51
SYCP2-203ENST00000412613 NPM3O75607 178 aaKnown RBP18.07■□□□□ 0.48
SYCP2-203ENST00000412613 RNF216Q9NWF9 866 aaPredicted RBP17.94■□□□□ 0.46
SYCP2-203ENST00000412613 HOXD11P31277 338 aaPredicted RBP17.87■□□□□ 0.45
SYCP2-203ENST00000412613 POTEDQ86YR6 584 aa17.79■□□□□ 0.44
SYCP2-203ENST00000412613 DNAJC5BQ9UF47 199 aa17.63■□□□□ 0.41
SYCP2-203ENST00000412613 SLC4A1APQ9BWU0 796 aaKnown RBP17.55■□□□□ 0.4
SYCP2-203ENST00000412613 DCAF8L1A6NGE4 600 aa17.34■□□□□ 0.37
SYCP2-203ENST00000412613 SLC4A2P04920 1241 aa17.06■□□□□ 0.32
SYCP2-203ENST00000412613 EHMT2Q96KQ7 1210 aa17.05■□□□□ 0.32
SYCP2-203ENST00000412613 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.97■□□□□ 0.31
SYCP2-203ENST00000412613 ZBTB22O15209 634 aa16.95■□□□□ 0.3
SYCP2-203ENST00000412613 FOXD4L1Q9NU39 408 aa16.95■□□□□ 0.3
SYCP2-203ENST00000412613 CSRNP3Q8WYN3 585 aa16.91■□□□□ 0.3
SYCP2-203ENST00000412613 U3KPZ7 1027 aaPredicted RBP16.73■□□□□ 0.27
SYCP2-203ENST00000412613 RNF39Q9H2S5 420 aa16.71■□□□□ 0.27
SYCP2-203ENST00000412613 MYCNP04198 464 aaPredicted RBP16.7■□□□□ 0.26
SYCP2-203ENST00000412613 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.56■□□□□ 0.24
SYCP2-203ENST00000412613 HNRNPUL2Q1KMD3 747 aaKnown RBP16.56■□□□□ 0.24
SYCP2-203ENST00000412613 C1QBPQ07021 282 aaKnown RBP16.52■□□□□ 0.24
SYCP2-203ENST00000412613 SAMD1Q6SPF0 538 aaPredicted RBP16.49■□□□□ 0.23
SYCP2-203ENST00000412613 ATXN8OSP0DMR3 200 aa16.39■□□□□ 0.21
SYCP2-203ENST00000412613 APLP2Q06481 763 aa16.36■□□□□ 0.21
SYCP2-203ENST00000412613 ATF5Q9Y2D1 282 aaPredicted RBP16.24■□□□□ 0.19
SYCP2-203ENST00000412613 SPINK5Q9NQ38 1064 aaPredicted RBP16.23■□□□□ 0.19
SYCP2-203ENST00000412613 CACNB1Q02641 598 aaPredicted RBP16.21■□□□□ 0.19
SYCP2-203ENST00000412613 CAPN15O75808 1086 aa16.15■□□□□ 0.18
SYCP2-203ENST00000412613 ZNF219Q9P2Y4 722 aaPredicted RBP16.13■□□□□ 0.17
SYCP2-203ENST00000412613 TRHP20396 242 aaPredicted RBP16.08■□□□□ 0.16
SYCP2-203ENST00000412613 DSG3P32926 999 aa15.91■□□□□ 0.14
SYCP2-203ENST00000412613 POLA2Q14181 598 aa15.86■□□□□ 0.13
SYCP2-203ENST00000412613 ABCB7O75027 752 aa15.82■□□□□ 0.12
SYCP2-203ENST00000412613 ZBTB12Q9Y330 459 aaPredicted RBP15.61■□□□□ 0.09
SYCP2-203ENST00000412613 FBLN2P98095 1184 aa15.55■□□□□ 0.08
SYCP2-203ENST00000412613 MKRN4PQ13434 485 aaPredicted RBP15.54■□□□□ 0.08
SYCP2-203ENST00000412613 OSCARQ8IYS5 282 aa15.3■□□□□ 0.04
SYCP2-203ENST00000412613 FKBP8Q14318 412 aa15.25■□□□□ 0.03
SYCP2-203ENST00000412613 SPDYE4A6NLX3 237 aa15.21■□□□□ 0.03
SYCP2-203ENST00000412613 SPDYE2BA6NHP3 402 aa15.2■□□□□ 0.02
SYCP2-203ENST00000412613 SPDYE6P0CI01 402 aa15.2■□□□□ 0.02
SYCP2-203ENST00000412613 SPDYE2Q495Y8 402 aa15.2■□□□□ 0.02
SYCP2-203ENST00000412613 RBM42Q9BTD8 480 aaKnown RBP15.16■□□□□ 0.02
SYCP2-203ENST00000412613 ZNF692Q9BU19 519 aaPredicted RBP15.13■□□□□ 0.01
SYCP2-203ENST00000412613 SSUH2Q9Y2M2 353 aa15.09■□□□□ 0.01
SYCP2-203ENST00000412613 PROM2Q8N271 834 aa15.01□□□□□ -0.01
SYCP2-203ENST00000412613 AKT1S1Q96B36 256 aa14.99□□□□□ -0.01
SYCP2-203ENST00000412613 PABPN1Q86U42 306 aaKnown RBP eCLIP14.93□□□□□ -0.02
SYCP2-203ENST00000412613 REM2Q8IYK8 340 aaPredicted RBP14.83□□□□□ -0.04
SYCP2-203ENST00000412613 FBXO3Q9UK99 471 aa14.74□□□□□ -0.05
SYCP2-203ENST00000412613 SPDYE1Q8NFV5 336 aaPredicted RBP14.73□□□□□ -0.05
SYCP2-203ENST00000412613 STAG3Q9UJ98 1225 aa14.72□□□□□ -0.05
SYCP2-203ENST00000412613 PITPNM1O00562 1244 aa14.64□□□□□ -0.07
SYCP2-203ENST00000412613 CLEC11AQ9Y240 323 aa14.63□□□□□ -0.07
SYCP2-203ENST00000412613 PRR29P0C7W0 189 aa14.53□□□□□ -0.08
SYCP2-203ENST00000412613 VASPP50552 380 aaPredicted RBP14.5□□□□□ -0.09
SYCP2-203ENST00000412613 CHRDL2Q6WN34 429 aa14.5□□□□□ -0.09
SYCP2-203ENST00000412613 MIER1Q8N108 512 aa14.41□□□□□ -0.1
SYCP2-203ENST00000412613 FXR2P51116 673 aaKnown RBP eCLIP14.39□□□□□ -0.11
SYCP2-203ENST00000412613 PLCD3Q8N3E9 789 aa14.38□□□□□ -0.11
SYCP2-203ENST00000412613 CREBZFQ9NS37 354 aa14.37□□□□□ -0.11
SYCP2-203ENST00000412613 PLEKHG5O94827 1062 aa14.34□□□□□ -0.11
SYCP2-203ENST00000412613 IFNLR1Q8IU57 520 aaPredicted RBP14.33□□□□□ -0.12
SYCP2-203ENST00000412613 PIP4P2Q8N4L2 257 aa14.32□□□□□ -0.12
SYCP2-203ENST00000412613 PRKAR2AP13861 404 aaKnown RBP14.28□□□□□ -0.12
SYCP2-203ENST00000412613 CHADLQ6NUI6 762 aa14.27□□□□□ -0.13
SYCP2-203ENST00000412613 ZBTB47Q9UFB7 747 aaPredicted RBP14.26□□□□□ -0.13
SYCP2-203ENST00000412613 MNX1P50219 401 aaPredicted RBP14.25□□□□□ -0.13
SYCP2-203ENST00000412613 KLHL34Q8N239 644 aa14.23□□□□□ -0.13
SYCP2-203ENST00000412613 FARP1Q9Y4F1 1045 aaPredicted RBP14.17□□□□□ -0.14
SYCP2-203ENST00000412613 SPOCK2Q92563 424 aa14.14□□□□□ -0.15
SYCP2-203ENST00000412613 NPM1P06748 294 aaKnown RBP eCLIP14.13□□□□□ -0.15
SYCP2-203ENST00000412613 NUBP1P53384 320 aa14.07□□□□□ -0.16
SYCP2-203ENST00000412613 AMER1Q5JTC6 1135 aaPredicted RBP13.99□□□□□ -0.17
SYCP2-203ENST00000412613 POTEHQ6S545 545 aa13.99□□□□□ -0.17
SYCP2-203ENST00000412613 RASEFQ8IZ41 740 aa13.97□□□□□ -0.17
SYCP2-203ENST00000412613 FAM212AQ96EL1 285 aa13.93□□□□□ -0.18
SYCP2-203ENST00000412613 GSE1Q14687 1217 aa13.92□□□□□ -0.18
SYCP2-203ENST00000412613 RTN4Q9NQC3 1192 aaKnown RBP13.92□□□□□ -0.18
SYCP2-203ENST00000412613 DCAF8Q5TAQ9 597 aa13.9□□□□□ -0.18
SYCP2-203ENST00000412613 C19orf67A6NJJ6 358 aa13.89□□□□□ -0.19
SYCP2-203ENST00000412613 CIZ1Q9ULV3 898 aaPredicted RBP13.88□□□□□ -0.19
SYCP2-203ENST00000412613 CD44P16070 742 aaKnown RBP13.87□□□□□ -0.19
SYCP2-203ENST00000412613 PKD2Q13563 968 aa13.87□□□□□ -0.19
SYCP2-203ENST00000412613 PAK3O75914 559 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms