RNA–Protein interactions for RNA: ENST00000411460.5

LINC00113-201, long intergenic non-protein coding RNA 113, humanhuman

TSL 3

Gene LINC00113, Length 524 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00113-201ENST00000411460 AEBP2Q6ZN18 517 aaPredicted RBP18.29■□□□□ 0.52
LINC00113-201ENST00000411460 CHIC1Q5VXU3 224 aa17.36■□□□□ 0.37
LINC00113-201ENST00000411460 SENP3Q9H4L4 574 aaPredicted RBP15.54■□□□□ 0.08
LINC00113-201ENST00000411460 PHF23Q9BUL5 403 aaPredicted RBP15.36■□□□□ 0.05
LINC00113-201ENST00000411460 FOXD1Q16676 465 aa14.52□□□□□ -0.09
LINC00113-201ENST00000411460 PLPPR3Q6T4P5 718 aa13.83□□□□□ -0.2
LINC00113-201ENST00000411460 PPP6R1Q9UPN7 881 aa13.6□□□□□ -0.23
LINC00113-201ENST00000411460 MSH5O43196 834 aa13.55□□□□□ -0.24
LINC00113-201ENST00000411460 ADRA2BP18089 450 aa13.5□□□□□ -0.25
LINC00113-201ENST00000411460 PIAS4Q8N2W9 510 aaPredicted RBP13.5□□□□□ -0.25
LINC00113-201ENST00000411460 POTEDQ86YR6 584 aa13.24□□□□□ -0.29
LINC00113-201ENST00000411460 MAPK8IP2Q13387 824 aaPredicted RBP12.42□□□□□ -0.42
LINC00113-201ENST00000411460 DMRT2Q9Y5R5 561 aa12.36□□□□□ -0.43
LINC00113-201ENST00000411460 SCAF1Q9H7N4 1312 aaKnown RBP12.32□□□□□ -0.44
LINC00113-201ENST00000411460 PPP4R3CPQ6ZMV5 832 aa12.13□□□□□ -0.47
LINC00113-201ENST00000411460 HOXD11P31277 338 aaPredicted RBP11.94□□□□□ -0.5
LINC00113-201ENST00000411460 CNKSR2Q8WXI2 1034 aa11.91□□□□□ -0.5
LINC00113-201ENST00000411460 RNF216Q9NWF9 866 aaPredicted RBP11.81□□□□□ -0.52
LINC00113-201ENST00000411460 DCAF8L1A6NGE4 600 aa11.7□□□□□ -0.54
LINC00113-201ENST00000411460 NCBP3Q53F19 620 aaKnown RBP11.62□□□□□ -0.55
LINC00113-201ENST00000411460 RNF39Q9H2S5 420 aa11.6□□□□□ -0.55
LINC00113-201ENST00000411460 CACNB1Q02641 598 aaPredicted RBP11.58□□□□□ -0.56
LINC00113-201ENST00000411460 DNAJC5BQ9UF47 199 aa11.56□□□□□ -0.56
LINC00113-201ENST00000411460 NPM3O75607 178 aaKnown RBP11.5□□□□□ -0.57
LINC00113-201ENST00000411460 C1QBPQ07021 282 aaKnown RBP11.41□□□□□ -0.58
LINC00113-201ENST00000411460 KCNA4P22459 653 aa11.28□□□□□ -0.6
LINC00113-201ENST00000411460 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.25□□□□□ -0.61
LINC00113-201ENST00000411460 U3KPZ7 1027 aaPredicted RBP11.1□□□□□ -0.63
LINC00113-201ENST00000411460 SLC4A2P04920 1241 aa11.03□□□□□ -0.64
LINC00113-201ENST00000411460 SPINK5Q9NQ38 1064 aaPredicted RBP10.92□□□□□ -0.66
LINC00113-201ENST00000411460 DSG3P32926 999 aa10.86□□□□□ -0.67
LINC00113-201ENST00000411460 CAPN15O75808 1086 aa10.82□□□□□ -0.68
LINC00113-201ENST00000411460 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.72□□□□□ -0.69
LINC00113-201ENST00000411460 HNRNPUL2Q1KMD3 747 aaKnown RBP10.72□□□□□ -0.69
LINC00113-201ENST00000411460 APLP2Q06481 763 aa10.71□□□□□ -0.69
LINC00113-201ENST00000411460 SAMD1Q6SPF0 538 aaPredicted RBP10.68□□□□□ -0.7
LINC00113-201ENST00000411460 ZNF219Q9P2Y4 722 aaPredicted RBP10.68□□□□□ -0.7
LINC00113-201ENST00000411460 TRHP20396 242 aaPredicted RBP10.65□□□□□ -0.7
LINC00113-201ENST00000411460 MYCNP04198 464 aaPredicted RBP10.62□□□□□ -0.71
LINC00113-201ENST00000411460 SLC4A1APQ9BWU0 796 aaKnown RBP10.61□□□□□ -0.71
LINC00113-201ENST00000411460 ABCB7O75027 752 aa10.58□□□□□ -0.72
LINC00113-201ENST00000411460 FOXD4L1Q9NU39 408 aa10.52□□□□□ -0.73
LINC00113-201ENST00000411460 ZBTB22O15209 634 aa10.41□□□□□ -0.74
LINC00113-201ENST00000411460 POLA2Q14181 598 aa10.41□□□□□ -0.74
LINC00113-201ENST00000411460 ATF5Q9Y2D1 282 aaPredicted RBP10.41□□□□□ -0.74
LINC00113-201ENST00000411460 POTEHQ6S545 545 aa10.36□□□□□ -0.75
LINC00113-201ENST00000411460 RBM42Q9BTD8 480 aaKnown RBP10.31□□□□□ -0.76
LINC00113-201ENST00000411460 ATXN8OSP0DMR3 200 aa10.23□□□□□ -0.77
LINC00113-201ENST00000411460 ZBTB12Q9Y330 459 aaPredicted RBP10.19□□□□□ -0.78
LINC00113-201ENST00000411460 CHRDL2Q6WN34 429 aa10.1□□□□□ -0.79
LINC00113-201ENST00000411460 AKT1S1Q96B36 256 aa10.1□□□□□ -0.79
LINC00113-201ENST00000411460 OSCARQ8IYS5 282 aa10.07□□□□□ -0.8
LINC00113-201ENST00000411460 REM2Q8IYK8 340 aaPredicted RBP10.01□□□□□ -0.81
LINC00113-201ENST00000411460 MKRN4PQ13434 485 aaPredicted RBP9.95□□□□□ -0.82
LINC00113-201ENST00000411460 FBLN2P98095 1184 aa9.92□□□□□ -0.82
LINC00113-201ENST00000411460 CSRNP3Q8WYN3 585 aa9.92□□□□□ -0.82
LINC00113-201ENST00000411460 SPDYE2BA6NHP3 402 aa9.91□□□□□ -0.82
LINC00113-201ENST00000411460 SPDYE6P0CI01 402 aa9.91□□□□□ -0.82
LINC00113-201ENST00000411460 SPDYE2Q495Y8 402 aa9.91□□□□□ -0.82
LINC00113-201ENST00000411460 PITPNM1O00562 1244 aa9.89□□□□□ -0.83
LINC00113-201ENST00000411460 PIP4P2Q8N4L2 257 aa9.87□□□□□ -0.83
LINC00113-201ENST00000411460 FXR2P51116 673 aaKnown RBP eCLIP9.85□□□□□ -0.83
LINC00113-201ENST00000411460 SSUH2Q9Y2M2 353 aa9.82□□□□□ -0.84
LINC00113-201ENST00000411460 ZNF692Q9BU19 519 aaPredicted RBP9.75□□□□□ -0.85
LINC00113-201ENST00000411460 SP7Q8TDD2 431 aaPredicted RBP9.71□□□□□ -0.86
LINC00113-201ENST00000411460 SPDYE1Q8NFV5 336 aaPredicted RBP9.7□□□□□ -0.86
LINC00113-201ENST00000411460 EHMT2Q96KQ7 1210 aa9.67□□□□□ -0.86
LINC00113-201ENST00000411460 CLEC11AQ9Y240 323 aa9.63□□□□□ -0.87
LINC00113-201ENST00000411460 HAX1O00165 279 aa9.62□□□□□ -0.87
LINC00113-201ENST00000411460 PABPN1Q86U42 306 aaKnown RBP eCLIP9.62□□□□□ -0.87
LINC00113-201ENST00000411460 PRKAR2AP13861 404 aaKnown RBP9.61□□□□□ -0.87
LINC00113-201ENST00000411460 EVX2Q03828 476 aa9.6□□□□□ -0.87
LINC00113-201ENST00000411460 C19orf67A6NJJ6 358 aa9.53□□□□□ -0.88
LINC00113-201ENST00000411460 PRR29P0C7W0 189 aa9.51□□□□□ -0.89
LINC00113-201ENST00000411460 CHADLQ6NUI6 762 aa9.5□□□□□ -0.89
LINC00113-201ENST00000411460 SPDYE4A6NLX3 237 aa9.41□□□□□ -0.9
LINC00113-201ENST00000411460 FARP1Q9Y4F1 1045 aaPredicted RBP9.38□□□□□ -0.91
LINC00113-201ENST00000411460 GABBR2O75899 941 aa9.36□□□□□ -0.91
LINC00113-201ENST00000411460 STAG3Q9UJ98 1225 aa9.36□□□□□ -0.91
LINC00113-201ENST00000411460 CREBZFQ9NS37 354 aa9.34□□□□□ -0.91
LINC00113-201ENST00000411460 PROM2Q8N271 834 aa9.31□□□□□ -0.92
LINC00113-201ENST00000411460 CD44P16070 742 aaKnown RBP9.3□□□□□ -0.92
LINC00113-201ENST00000411460 MNX1P50219 401 aaPredicted RBP9.23□□□□□ -0.93
LINC00113-201ENST00000411460 CLCN6P51797 869 aa9.22□□□□□ -0.93
LINC00113-201ENST00000411460 ZNF579Q8NAF0 562 aaKnown RBP9.21□□□□□ -0.94
LINC00113-201ENST00000411460 POTEIP0CG38 1075 aa9.2□□□□□ -0.94
LINC00113-201ENST00000411460 ZRANB1Q9UGI0 708 aa9.16□□□□□ -0.94
LINC00113-201ENST00000411460 NPM1P06748 294 aaKnown RBP eCLIP9.1□□□□□ -0.95
LINC00113-201ENST00000411460 LHX8Q68G74 356 aa9.1□□□□□ -0.95
LINC00113-201ENST00000411460 GALR2O43603 387 aaPredicted RBP9.08□□□□□ -0.96
LINC00113-201ENST00000411460 PHF12Q96QT6 1004 aa9.05□□□□□ -0.96
LINC00113-201ENST00000411460 PAK3O75914 559 aaPredicted RBP9.04□□□□□ -0.96
LINC00113-201ENST00000411460 DCBLD2Q96PD2 775 aa9.03□□□□□ -0.96
LINC00113-201ENST00000411460 CCDC61Q9Y6R9 512 aa8.97□□□□□ -0.97
LINC00113-201ENST00000411460 MS4A3Q96HJ5 214 aa8.95□□□□□ -0.98
LINC00113-201ENST00000411460 PELP1Q8IZL8 1130 aaKnown RBP8.93□□□□□ -0.98
LINC00113-201ENST00000411460 MIER1Q8N108 512 aa8.93□□□□□ -0.98
LINC00113-201ENST00000411460 FKBP8Q14318 412 aa8.92□□□□□ -0.98
LINC00113-201ENST00000411460 ASTLQ6HA08 431 aaPredicted RBP8.92□□□□□ -0.98
LINC00113-201ENST00000411460 TSPYL2Q9H2G4 693 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms