RNA–Protein interactions for RNA: ENST00000403284.2

ROS1-203, Transcript of ROS proto-oncogene 1, receptor tyrosine kinase, humanhuman

TSL 2

Gene ROS1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROS1-203ENST00000403284 AEBP2Q6ZN18 517 aaPredicted RBP26.88■■□□□ 1.89
ROS1-203ENST00000403284 CHIC1Q5VXU3 224 aa25.99■■□□□ 1.75
ROS1-203ENST00000403284 SENP3Q9H4L4 574 aaPredicted RBP22.93■■□□□ 1.26
ROS1-203ENST00000403284 PHF23Q9BUL5 403 aaPredicted RBP22.79■■□□□ 1.24
ROS1-203ENST00000403284 FOXD1Q16676 465 aa21.28■■□□□ 1
ROS1-203ENST00000403284 PLPPR3Q6T4P5 718 aa21■□□□□ 0.95
ROS1-203ENST00000403284 PPP6R1Q9UPN7 881 aa20.21■□□□□ 0.83
ROS1-203ENST00000403284 ADRA2BP18089 450 aa20.2■□□□□ 0.82
ROS1-203ENST00000403284 PIAS4Q8N2W9 510 aaPredicted RBP20.03■□□□□ 0.8
ROS1-203ENST00000403284 MSH5O43196 834 aa19.8■□□□□ 0.76
ROS1-203ENST00000403284 SCAF1Q9H7N4 1312 aaKnown RBP18.55■□□□□ 0.56
ROS1-203ENST00000403284 POTEDQ86YR6 584 aa18.53■□□□□ 0.56
ROS1-203ENST00000403284 PPP4R3CPQ6ZMV5 832 aa18.45■□□□□ 0.54
ROS1-203ENST00000403284 MAPK8IP2Q13387 824 aaPredicted RBP18.41■□□□□ 0.54
ROS1-203ENST00000403284 DMRT2Q9Y5R5 561 aa18.23■□□□□ 0.51
ROS1-203ENST00000403284 CNKSR2Q8WXI2 1034 aa18.02■□□□□ 0.48
ROS1-203ENST00000403284 NCBP3Q53F19 620 aaKnown RBP17.93■□□□□ 0.46
ROS1-203ENST00000403284 RNF216Q9NWF9 866 aaPredicted RBP17.74■□□□□ 0.43
ROS1-203ENST00000403284 HOXD11P31277 338 aaPredicted RBP17.73■□□□□ 0.43
ROS1-203ENST00000403284 KCNA4P22459 653 aa17.65■□□□□ 0.42
ROS1-203ENST00000403284 NPM3O75607 178 aaKnown RBP17.6■□□□□ 0.41
ROS1-203ENST00000403284 DCAF8L1A6NGE4 600 aa17.51■□□□□ 0.39
ROS1-203ENST00000403284 DNAJC5BQ9UF47 199 aa17.13■□□□□ 0.33
ROS1-203ENST00000403284 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.94■□□□□ 0.3
ROS1-203ENST00000403284 RNF39Q9H2S5 420 aa16.9■□□□□ 0.3
ROS1-203ENST00000403284 SLC4A1APQ9BWU0 796 aaKnown RBP16.78■□□□□ 0.28
ROS1-203ENST00000403284 CACNB1Q02641 598 aaPredicted RBP16.72■□□□□ 0.27
ROS1-203ENST00000403284 C1QBPQ07021 282 aaKnown RBP16.71■□□□□ 0.27
ROS1-203ENST00000403284 SLC4A2P04920 1241 aa16.68■□□□□ 0.26
ROS1-203ENST00000403284 U3KPZ7 1027 aaPredicted RBP16.58■□□□□ 0.24
ROS1-203ENST00000403284 FOXD4L1Q9NU39 408 aa16.36■□□□□ 0.21
ROS1-203ENST00000403284 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.34■□□□□ 0.21
ROS1-203ENST00000403284 HNRNPUL2Q1KMD3 747 aaKnown RBP16.34■□□□□ 0.21
ROS1-203ENST00000403284 MYCNP04198 464 aaPredicted RBP16.31■□□□□ 0.2
ROS1-203ENST00000403284 APLP2Q06481 763 aa16.26■□□□□ 0.19
ROS1-203ENST00000403284 SAMD1Q6SPF0 538 aaPredicted RBP16.25■□□□□ 0.19
ROS1-203ENST00000403284 ZBTB22O15209 634 aa16.21■□□□□ 0.19
ROS1-203ENST00000403284 CAPN15O75808 1086 aa16.21■□□□□ 0.19
ROS1-203ENST00000403284 SPINK5Q9NQ38 1064 aaPredicted RBP16.21■□□□□ 0.19
ROS1-203ENST00000403284 TRHP20396 242 aaPredicted RBP16.05■□□□□ 0.16
ROS1-203ENST00000403284 ZNF219Q9P2Y4 722 aaPredicted RBP16.05■□□□□ 0.16
ROS1-203ENST00000403284 DSG3P32926 999 aa15.97■□□□□ 0.15
ROS1-203ENST00000403284 EHMT2Q96KQ7 1210 aa15.95■□□□□ 0.14
ROS1-203ENST00000403284 CSRNP3Q8WYN3 585 aa15.87■□□□□ 0.13
ROS1-203ENST00000403284 ABCB7O75027 752 aa15.85■□□□□ 0.13
ROS1-203ENST00000403284 ATF5Q9Y2D1 282 aaPredicted RBP15.84■□□□□ 0.13
ROS1-203ENST00000403284 ATXN8OSP0DMR3 200 aa15.83■□□□□ 0.12
ROS1-203ENST00000403284 POLA2Q14181 598 aa15.71■□□□□ 0.11
ROS1-203ENST00000403284 ZBTB12Q9Y330 459 aaPredicted RBP15.46■□□□□ 0.07
ROS1-203ENST00000403284 RBM42Q9BTD8 480 aaKnown RBP15.28■□□□□ 0.04
ROS1-203ENST00000403284 FBLN2P98095 1184 aa15.27■□□□□ 0.04
ROS1-203ENST00000403284 OSCARQ8IYS5 282 aa15.18■□□□□ 0.02
ROS1-203ENST00000403284 MKRN4PQ13434 485 aaPredicted RBP15.13■□□□□ 0.01
ROS1-203ENST00000403284 SPDYE2BA6NHP3 402 aa15□□□□□ -0.01
ROS1-203ENST00000403284 SPDYE6P0CI01 402 aa15□□□□□ -0.01
ROS1-203ENST00000403284 SPDYE2Q495Y8 402 aa15□□□□□ -0.01
ROS1-203ENST00000403284 AKT1S1Q96B36 256 aa15□□□□□ -0.01
ROS1-203ENST00000403284 ZNF692Q9BU19 519 aaPredicted RBP14.9□□□□□ -0.02
ROS1-203ENST00000403284 REM2Q8IYK8 340 aaPredicted RBP14.84□□□□□ -0.03
ROS1-203ENST00000403284 SSUH2Q9Y2M2 353 aa14.81□□□□□ -0.04
ROS1-203ENST00000403284 CHRDL2Q6WN34 429 aa14.74□□□□□ -0.05
ROS1-203ENST00000403284 SPDYE4A6NLX3 237 aa14.7□□□□□ -0.06
ROS1-203ENST00000403284 PABPN1Q86U42 306 aaKnown RBP eCLIP14.68□□□□□ -0.06
ROS1-203ENST00000403284 PITPNM1O00562 1244 aa14.67□□□□□ -0.06
ROS1-203ENST00000403284 SPDYE1Q8NFV5 336 aaPredicted RBP14.64□□□□□ -0.07
ROS1-203ENST00000403284 POTEHQ6S545 545 aa14.63□□□□□ -0.07
ROS1-203ENST00000403284 CLEC11AQ9Y240 323 aa14.59□□□□□ -0.07
ROS1-203ENST00000403284 PIP4P2Q8N4L2 257 aa14.47□□□□□ -0.09
ROS1-203ENST00000403284 FXR2P51116 673 aaKnown RBP eCLIP14.46□□□□□ -0.09
ROS1-203ENST00000403284 PRR29P0C7W0 189 aa14.42□□□□□ -0.1
ROS1-203ENST00000403284 FKBP8Q14318 412 aa14.41□□□□□ -0.1
ROS1-203ENST00000403284 STAG3Q9UJ98 1225 aa14.4□□□□□ -0.1
ROS1-203ENST00000403284 PROM2Q8N271 834 aa14.36□□□□□ -0.11
ROS1-203ENST00000403284 PRKAR2AP13861 404 aaKnown RBP14.32□□□□□ -0.12
ROS1-203ENST00000403284 CHADLQ6NUI6 762 aa14.23□□□□□ -0.13
ROS1-203ENST00000403284 HAX1O00165 279 aa14.13□□□□□ -0.15
ROS1-203ENST00000403284 CREBZFQ9NS37 354 aa14.12□□□□□ -0.15
ROS1-203ENST00000403284 FARP1Q9Y4F1 1045 aaPredicted RBP14.08□□□□□ -0.16
ROS1-203ENST00000403284 FBXO3Q9UK99 471 aa14.02□□□□□ -0.17
ROS1-203ENST00000403284 PLEKHG5O94827 1062 aa13.99□□□□□ -0.17
ROS1-203ENST00000403284 MIER1Q8N108 512 aa13.99□□□□□ -0.17
ROS1-203ENST00000403284 C19orf67A6NJJ6 358 aa13.98□□□□□ -0.17
ROS1-203ENST00000403284 PLCD3Q8N3E9 789 aa13.95□□□□□ -0.18
ROS1-203ENST00000403284 NPM1P06748 294 aaKnown RBP eCLIP13.94□□□□□ -0.18
ROS1-203ENST00000403284 SP7Q8TDD2 431 aaPredicted RBP13.92□□□□□ -0.18
ROS1-203ENST00000403284 MNX1P50219 401 aaPredicted RBP13.91□□□□□ -0.18
ROS1-203ENST00000403284 EVX2Q03828 476 aa13.91□□□□□ -0.18
ROS1-203ENST00000403284 CD44P16070 742 aaKnown RBP13.89□□□□□ -0.19
ROS1-203ENST00000403284 ZBTB47Q9UFB7 747 aaPredicted RBP13.83□□□□□ -0.2
ROS1-203ENST00000403284 PAK3O75914 559 aaPredicted RBP13.8□□□□□ -0.2
ROS1-203ENST00000403284 VASPP50552 380 aaPredicted RBP13.8□□□□□ -0.2
ROS1-203ENST00000403284 ZRANB1Q9UGI0 708 aa13.77□□□□□ -0.21
ROS1-203ENST00000403284 ZNF579Q8NAF0 562 aaKnown RBP13.69□□□□□ -0.22
ROS1-203ENST00000403284 KLHL34Q8N239 644 aa13.68□□□□□ -0.22
ROS1-203ENST00000403284 TSPYL2Q9H2G4 693 aaPredicted RBP13.67□□□□□ -0.22
ROS1-203ENST00000403284 GABBR2O75899 941 aa13.66□□□□□ -0.22
ROS1-203ENST00000403284 CLCN6P51797 869 aa13.66□□□□□ -0.22
ROS1-203ENST00000403284 RASEFQ8IZ41 740 aa13.64□□□□□ -0.23
ROS1-203ENST00000403284 NUBP1P53384 320 aa13.61□□□□□ -0.23
ROS1-203ENST00000403284 PHF12Q96QT6 1004 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms