RNA–Protein interactions for RNA: ENST00000395534.2

ECM2-203, Transcript of extracellular matrix protein 2, humanhuman

TSL 3

Gene ECM2, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM2-203ENST00000395534 AEBP2Q6ZN18 517 aaPredicted RBP22.51■■□□□ 1.19
ECM2-203ENST00000395534 CHIC1Q5VXU3 224 aa21.07■□□□□ 0.96
ECM2-203ENST00000395534 SENP3Q9H4L4 574 aaPredicted RBP19.25■□□□□ 0.67
ECM2-203ENST00000395534 PHF23Q9BUL5 403 aaPredicted RBP18.95■□□□□ 0.62
ECM2-203ENST00000395534 FOXD1Q16676 465 aa17.98■□□□□ 0.47
ECM2-203ENST00000395534 POTEDQ86YR6 584 aa17.05■□□□□ 0.32
ECM2-203ENST00000395534 MSH5O43196 834 aa16.94■□□□□ 0.3
ECM2-203ENST00000395534 PIAS4Q8N2W9 510 aaPredicted RBP16.77■□□□□ 0.28
ECM2-203ENST00000395534 PLPPR3Q6T4P5 718 aa16.71■□□□□ 0.27
ECM2-203ENST00000395534 PPP6R1Q9UPN7 881 aa16.58■□□□□ 0.24
ECM2-203ENST00000395534 ADRA2BP18089 450 aa16.54■□□□□ 0.24
ECM2-203ENST00000395534 MAPK8IP2Q13387 824 aaPredicted RBP15.28■□□□□ 0.04
ECM2-203ENST00000395534 DMRT2Q9Y5R5 561 aa15.21■□□□□ 0.03
ECM2-203ENST00000395534 SCAF1Q9H7N4 1312 aaKnown RBP15.1■□□□□ 0.01
ECM2-203ENST00000395534 CACNB1Q02641 598 aaPredicted RBP14.75□□□□□ -0.05
ECM2-203ENST00000395534 DCAF8L1A6NGE4 600 aa14.71□□□□□ -0.05
ECM2-203ENST00000395534 PPP4R3CPQ6ZMV5 832 aa14.62□□□□□ -0.07
ECM2-203ENST00000395534 HOXD11P31277 338 aaPredicted RBP14.5□□□□□ -0.09
ECM2-203ENST00000395534 RNF39Q9H2S5 420 aa14.41□□□□□ -0.1
ECM2-203ENST00000395534 CNKSR2Q8WXI2 1034 aa14.39□□□□□ -0.11
ECM2-203ENST00000395534 RNF216Q9NWF9 866 aaPredicted RBP14.33□□□□□ -0.12
ECM2-203ENST00000395534 C1QBPQ07021 282 aaKnown RBP14.18□□□□□ -0.14
ECM2-203ENST00000395534 DNAJC5BQ9UF47 199 aa14.01□□□□□ -0.17
ECM2-203ENST00000395534 NCBP3Q53F19 620 aaKnown RBP13.97□□□□□ -0.17
ECM2-203ENST00000395534 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.9□□□□□ -0.18
ECM2-203ENST00000395534 NPM3O75607 178 aaKnown RBP13.77□□□□□ -0.21
ECM2-203ENST00000395534 U3KPZ7 1027 aaPredicted RBP13.54□□□□□ -0.24
ECM2-203ENST00000395534 CAPN15O75808 1086 aa13.47□□□□□ -0.25
ECM2-203ENST00000395534 SPINK5Q9NQ38 1064 aaPredicted RBP13.46□□□□□ -0.25
ECM2-203ENST00000395534 DSG3P32926 999 aa13.41□□□□□ -0.26
ECM2-203ENST00000395534 POTEHQ6S545 545 aa13.31□□□□□ -0.28
ECM2-203ENST00000395534 KCNA4P22459 653 aa13.26□□□□□ -0.29
ECM2-203ENST00000395534 SLC4A2P04920 1241 aa13.21□□□□□ -0.29
ECM2-203ENST00000395534 TRHP20396 242 aaPredicted RBP13.19□□□□□ -0.3
ECM2-203ENST00000395534 ABCB7O75027 752 aa13.15□□□□□ -0.3
ECM2-203ENST00000395534 APLP2Q06481 763 aa13.13□□□□□ -0.31
ECM2-203ENST00000395534 ZNF219Q9P2Y4 722 aaPredicted RBP13.11□□□□□ -0.31
ECM2-203ENST00000395534 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.04□□□□□ -0.32
ECM2-203ENST00000395534 HNRNPUL2Q1KMD3 747 aaKnown RBP13.04□□□□□ -0.32
ECM2-203ENST00000395534 SAMD1Q6SPF0 538 aaPredicted RBP12.96□□□□□ -0.33
ECM2-203ENST00000395534 RBM42Q9BTD8 480 aaKnown RBP12.8□□□□□ -0.36
ECM2-203ENST00000395534 MYCNP04198 464 aaPredicted RBP12.74□□□□□ -0.37
ECM2-203ENST00000395534 POLA2Q14181 598 aa12.73□□□□□ -0.37
ECM2-203ENST00000395534 CHRDL2Q6WN34 429 aa12.66□□□□□ -0.38
ECM2-203ENST00000395534 ATF5Q9Y2D1 282 aaPredicted RBP12.48□□□□□ -0.41
ECM2-203ENST00000395534 SLC4A1APQ9BWU0 796 aaKnown RBP12.46□□□□□ -0.41
ECM2-203ENST00000395534 FOXD4L1Q9NU39 408 aa12.45□□□□□ -0.42
ECM2-203ENST00000395534 AKT1S1Q96B36 256 aa12.44□□□□□ -0.42
ECM2-203ENST00000395534 ZBTB12Q9Y330 459 aaPredicted RBP12.44□□□□□ -0.42
ECM2-203ENST00000395534 OSCARQ8IYS5 282 aa12.37□□□□□ -0.43
ECM2-203ENST00000395534 REM2Q8IYK8 340 aaPredicted RBP12.34□□□□□ -0.43
ECM2-203ENST00000395534 SP7Q8TDD2 431 aaPredicted RBP12.34□□□□□ -0.43
ECM2-203ENST00000395534 PIP4P2Q8N4L2 257 aa12.29□□□□□ -0.44
ECM2-203ENST00000395534 PITPNM1O00562 1244 aa12.23□□□□□ -0.45
ECM2-203ENST00000395534 HAX1O00165 279 aa12.18□□□□□ -0.46
ECM2-203ENST00000395534 ZBTB22O15209 634 aa12.18□□□□□ -0.46
ECM2-203ENST00000395534 FXR2P51116 673 aaKnown RBP eCLIP12.14□□□□□ -0.47
ECM2-203ENST00000395534 ATXN8OSP0DMR3 200 aa12.05□□□□□ -0.48
ECM2-203ENST00000395534 FBLN2P98095 1184 aa12.03□□□□□ -0.48
ECM2-203ENST00000395534 SPDYE2BA6NHP3 402 aa12.01□□□□□ -0.49
ECM2-203ENST00000395534 SPDYE6P0CI01 402 aa12.01□□□□□ -0.49
ECM2-203ENST00000395534 SPDYE2Q495Y8 402 aa12.01□□□□□ -0.49
ECM2-203ENST00000395534 EVX2Q03828 476 aa11.97□□□□□ -0.49
ECM2-203ENST00000395534 CLEC11AQ9Y240 323 aa11.95□□□□□ -0.5
ECM2-203ENST00000395534 PRKAR2AP13861 404 aaKnown RBP11.92□□□□□ -0.5
ECM2-203ENST00000395534 SPDYE1Q8NFV5 336 aaPredicted RBP11.9□□□□□ -0.5
ECM2-203ENST00000395534 MKRN4PQ13434 485 aaPredicted RBP11.88□□□□□ -0.51
ECM2-203ENST00000395534 ZNF692Q9BU19 519 aaPredicted RBP11.86□□□□□ -0.51
ECM2-203ENST00000395534 SSUH2Q9Y2M2 353 aa11.81□□□□□ -0.52
ECM2-203ENST00000395534 C19orf67A6NJJ6 358 aa11.77□□□□□ -0.53
ECM2-203ENST00000395534 CHADLQ6NUI6 762 aa11.74□□□□□ -0.53
ECM2-203ENST00000395534 GABBR2O75899 941 aa11.69□□□□□ -0.54
ECM2-203ENST00000395534 PABPN1Q86U42 306 aaKnown RBP eCLIP11.68□□□□□ -0.54
ECM2-203ENST00000395534 PRR29P0C7W0 189 aa11.67□□□□□ -0.54
ECM2-203ENST00000395534 LHX8Q68G74 356 aa11.57□□□□□ -0.56
ECM2-203ENST00000395534 CD44P16070 742 aaKnown RBP11.53□□□□□ -0.56
ECM2-203ENST00000395534 FARP1Q9Y4F1 1045 aaPredicted RBP11.5□□□□□ -0.57
ECM2-203ENST00000395534 POTEIP0CG38 1075 aa11.43□□□□□ -0.58
ECM2-203ENST00000395534 CLCN6P51797 869 aa11.34□□□□□ -0.59
ECM2-203ENST00000395534 DCBLD2Q96PD2 775 aa11.34□□□□□ -0.59
ECM2-203ENST00000395534 CSRNP3Q8WYN3 585 aa11.33□□□□□ -0.6
ECM2-203ENST00000395534 ZRANB1Q9UGI0 708 aa11.32□□□□□ -0.6
ECM2-203ENST00000395534 ZNF579Q8NAF0 562 aaKnown RBP11.3□□□□□ -0.6
ECM2-203ENST00000395534 CREBZFQ9NS37 354 aa11.29□□□□□ -0.6
ECM2-203ENST00000395534 STAG3Q9UJ98 1225 aa11.25□□□□□ -0.61
ECM2-203ENST00000395534 GALR2O43603 387 aaPredicted RBP11.21□□□□□ -0.61
ECM2-203ENST00000395534 SPDYE4A6NLX3 237 aa11.19□□□□□ -0.62
ECM2-203ENST00000395534 PAK3O75914 559 aaPredicted RBP11.17□□□□□ -0.62
ECM2-203ENST00000395534 PHF12Q96QT6 1004 aa11.15□□□□□ -0.62
ECM2-203ENST00000395534 PLSCR2Q9NRY7 297 aa11.14□□□□□ -0.63
ECM2-203ENST00000395534 EHMT2Q96KQ7 1210 aa11.11□□□□□ -0.63
ECM2-203ENST00000395534 NPM1P06748 294 aaKnown RBP eCLIP11.08□□□□□ -0.64
ECM2-203ENST00000395534 OTUD5Q96G74 571 aa11.07□□□□□ -0.64
ECM2-203ENST00000395534 POTEB2H3BUK9 544 aa11.05□□□□□ -0.64
ECM2-203ENST00000395534 MNX1P50219 401 aaPredicted RBP11.03□□□□□ -0.64
ECM2-203ENST00000395534 PELP1Q8IZL8 1130 aaKnown RBP11□□□□□ -0.65
ECM2-203ENST00000395534 MS4A3Q96HJ5 214 aa10.97□□□□□ -0.65
ECM2-203ENST00000395534 METRNQ9UJH8 293 aa10.95□□□□□ -0.66
ECM2-203ENST00000395534 POTEMA6NI47 508 aa10.92□□□□□ -0.66
ECM2-203ENST00000395534 ASTLQ6HA08 431 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms