RNA–Protein interactions for RNA: ENST00000394802.4

CHRNA5-202, Transcript of cholinergic receptor nicotinic alpha 5 subunit, humanhuman

TSL 3

Gene CHRNA5, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5-202ENST00000394802 AEBP2Q6ZN18 517 aaPredicted RBP33.51■■■□□ 2.95
CHRNA5-202ENST00000394802 CHIC1Q5VXU3 224 aa33.26■■■□□ 2.91
CHRNA5-202ENST00000394802 PHF23Q9BUL5 403 aaPredicted RBP29.41■■■□□ 2.3
CHRNA5-202ENST00000394802 SENP3Q9H4L4 574 aaPredicted RBP28.15■■■□□ 2.1
CHRNA5-202ENST00000394802 PLPPR3Q6T4P5 718 aa27.24■■□□□ 1.95
CHRNA5-202ENST00000394802 FOXD1Q16676 465 aa26.17■■□□□ 1.78
CHRNA5-202ENST00000394802 ADRA2BP18089 450 aa25.78■■□□□ 1.72
CHRNA5-202ENST00000394802 PPP6R1Q9UPN7 881 aa25.77■■□□□ 1.72
CHRNA5-202ENST00000394802 PIAS4Q8N2W9 510 aaPredicted RBP24.81■■□□□ 1.56
CHRNA5-202ENST00000394802 KCNA4P22459 653 aa24.44■■□□□ 1.5
CHRNA5-202ENST00000394802 PPP4R3CPQ6ZMV5 832 aa24.17■■□□□ 1.46
CHRNA5-202ENST00000394802 MSH5O43196 834 aa23.72■■□□□ 1.39
CHRNA5-202ENST00000394802 NCBP3Q53F19 620 aaKnown RBP23.61■■□□□ 1.37
CHRNA5-202ENST00000394802 EHMT2Q96KQ7 1210 aa23.54■■□□□ 1.36
CHRNA5-202ENST00000394802 NPM3O75607 178 aaKnown RBP23.4■■□□□ 1.34
CHRNA5-202ENST00000394802 SCAF1Q9H7N4 1312 aaKnown RBP23.35■■□□□ 1.33
CHRNA5-202ENST00000394802 SLC4A1APQ9BWU0 796 aaKnown RBP23.33■■□□□ 1.33
CHRNA5-202ENST00000394802 CNKSR2Q8WXI2 1034 aa23.27■■□□□ 1.32
CHRNA5-202ENST00000394802 MAPK8IP2Q13387 824 aaPredicted RBP23.22■■□□□ 1.31
CHRNA5-202ENST00000394802 CSRNP3Q8WYN3 585 aa22.91■■□□□ 1.26
CHRNA5-202ENST00000394802 RNF216Q9NWF9 866 aaPredicted RBP22.64■■□□□ 1.21
CHRNA5-202ENST00000394802 DMRT2Q9Y5R5 561 aa22.61■■□□□ 1.21
CHRNA5-202ENST00000394802 ZBTB22O15209 634 aa22.54■■□□□ 1.2
CHRNA5-202ENST00000394802 DNAJC5BQ9UF47 199 aa22.43■■□□□ 1.18
CHRNA5-202ENST00000394802 HOXD11P31277 338 aaPredicted RBP22.39■■□□□ 1.17
CHRNA5-202ENST00000394802 FOXD4L1Q9NU39 408 aa22.19■■□□□ 1.14
CHRNA5-202ENST00000394802 SLC4A2P04920 1241 aa21.96■■□□□ 1.11
CHRNA5-202ENST00000394802 DCAF8L1A6NGE4 600 aa21.7■■□□□ 1.06
CHRNA5-202ENST00000394802 MYCNP04198 464 aaPredicted RBP21.53■■□□□ 1.04
CHRNA5-202ENST00000394802 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.37■■□□□ 1.01
CHRNA5-202ENST00000394802 ATXN8OSP0DMR3 200 aa21.26■□□□□ 0.99
CHRNA5-202ENST00000394802 U3KPZ7 1027 aaPredicted RBP21.15■□□□□ 0.98
CHRNA5-202ENST00000394802 ATF5Q9Y2D1 282 aaPredicted RBP21.07■□□□□ 0.96
CHRNA5-202ENST00000394802 SAMD1Q6SPF0 538 aaPredicted RBP20.93■□□□□ 0.94
CHRNA5-202ENST00000394802 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.92■□□□□ 0.94
CHRNA5-202ENST00000394802 HNRNPUL2Q1KMD3 747 aaKnown RBP20.92■□□□□ 0.94
CHRNA5-202ENST00000394802 FKBP8Q14318 412 aa20.67■□□□□ 0.9
CHRNA5-202ENST00000394802 POTEDQ86YR6 584 aa20.56■□□□□ 0.88
CHRNA5-202ENST00000394802 ZNF219Q9P2Y4 722 aaPredicted RBP20.54■□□□□ 0.88
CHRNA5-202ENST00000394802 APLP2Q06481 763 aa20.51■□□□□ 0.87
CHRNA5-202ENST00000394802 RNF39Q9H2S5 420 aa20.46■□□□□ 0.87
CHRNA5-202ENST00000394802 SPINK5Q9NQ38 1064 aaPredicted RBP20.42■□□□□ 0.86
CHRNA5-202ENST00000394802 TRHP20396 242 aaPredicted RBP20.34■□□□□ 0.85
CHRNA5-202ENST00000394802 CAPN15O75808 1086 aa20.24■□□□□ 0.83
CHRNA5-202ENST00000394802 C1QBPQ07021 282 aaKnown RBP20.17■□□□□ 0.82
CHRNA5-202ENST00000394802 MKRN4PQ13434 485 aaPredicted RBP20.15■□□□□ 0.82
CHRNA5-202ENST00000394802 POLA2Q14181 598 aa20.12■□□□□ 0.81
CHRNA5-202ENST00000394802 RTN4Q9NQC3 1192 aaKnown RBP20.03■□□□□ 0.8
CHRNA5-202ENST00000394802 ABCB7O75027 752 aa20■□□□□ 0.79
CHRNA5-202ENST00000394802 FBLN2P98095 1184 aa19.96■□□□□ 0.79
CHRNA5-202ENST00000394802 SPDYE4A6NLX3 237 aa19.95■□□□□ 0.78
CHRNA5-202ENST00000394802 AMER1Q5JTC6 1135 aaPredicted RBP19.89■□□□□ 0.77
CHRNA5-202ENST00000394802 DSG3P32926 999 aa19.72■□□□□ 0.75
CHRNA5-202ENST00000394802 ZBTB12Q9Y330 459 aaPredicted RBP19.69■□□□□ 0.74
CHRNA5-202ENST00000394802 PROM2Q8N271 834 aa19.68■□□□□ 0.74
CHRNA5-202ENST00000394802 FBXO3Q9UK99 471 aa19.57■□□□□ 0.72
CHRNA5-202ENST00000394802 CACNB1Q02641 598 aaPredicted RBP19.47■□□□□ 0.71
CHRNA5-202ENST00000394802 OSCARQ8IYS5 282 aa19.46■□□□□ 0.71
CHRNA5-202ENST00000394802 VASPP50552 380 aaPredicted RBP19.41■□□□□ 0.7
CHRNA5-202ENST00000394802 ZNF692Q9BU19 519 aaPredicted RBP19.36■□□□□ 0.69
CHRNA5-202ENST00000394802 SPDYE2BA6NHP3 402 aa19.27■□□□□ 0.68
CHRNA5-202ENST00000394802 SPDYE6P0CI01 402 aa19.27■□□□□ 0.68
CHRNA5-202ENST00000394802 SPDYE2Q495Y8 402 aa19.27■□□□□ 0.68
CHRNA5-202ENST00000394802 SSUH2Q9Y2M2 353 aa19.25■□□□□ 0.67
CHRNA5-202ENST00000394802 IFNLR1Q8IU57 520 aaPredicted RBP19.24■□□□□ 0.67
CHRNA5-202ENST00000394802 PABPN1Q86U42 306 aaKnown RBP eCLIP19.17■□□□□ 0.66
CHRNA5-202ENST00000394802 SLC24A1O60721 1099 aa19.11■□□□□ 0.65
CHRNA5-202ENST00000394802 STAG3Q9UJ98 1225 aa18.97■□□□□ 0.63
CHRNA5-202ENST00000394802 KLHL34Q8N239 644 aa18.93■□□□□ 0.62
CHRNA5-202ENST00000394802 PLCD3Q8N3E9 789 aa18.89■□□□□ 0.61
CHRNA5-202ENST00000394802 PKD2Q13563 968 aa18.86■□□□□ 0.61
CHRNA5-202ENST00000394802 MIER1Q8N108 512 aa18.84■□□□□ 0.61
CHRNA5-202ENST00000394802 SPOCK2Q92563 424 aa18.83■□□□□ 0.6
CHRNA5-202ENST00000394802 DCAF8L2P0C7V8 631 aa18.73■□□□□ 0.59
CHRNA5-202ENST00000394802 RBM42Q9BTD8 480 aaKnown RBP18.65■□□□□ 0.58
CHRNA5-202ENST00000394802 AKT1S1Q96B36 256 aa18.61■□□□□ 0.57
CHRNA5-202ENST00000394802 ECM2O94769 699 aaPredicted RBP18.58■□□□□ 0.56
CHRNA5-202ENST00000394802 PLEKHG5O94827 1062 aa18.56■□□□□ 0.56
CHRNA5-202ENST00000394802 SPDYE1Q8NFV5 336 aaPredicted RBP18.55■□□□□ 0.56
CHRNA5-202ENST00000394802 CLEC11AQ9Y240 323 aa18.53■□□□□ 0.56
CHRNA5-202ENST00000394802 REM2Q8IYK8 340 aaPredicted RBP18.51■□□□□ 0.55
CHRNA5-202ENST00000394802 ZBTB47Q9UFB7 747 aaPredicted RBP18.49■□□□□ 0.55
CHRNA5-202ENST00000394802 CIZ1Q9ULV3 898 aaPredicted RBP18.48■□□□□ 0.55
CHRNA5-202ENST00000394802 RGL2O15211 777 aa18.45■□□□□ 0.54
CHRNA5-202ENST00000394802 PLCB2Q00722 1185 aa18.44■□□□□ 0.54
CHRNA5-202ENST00000394802 PRR29P0C7W0 189 aa18.4■□□□□ 0.54
CHRNA5-202ENST00000394802 CREBZFQ9NS37 354 aa18.38■□□□□ 0.53
CHRNA5-202ENST00000394802 NPM1P06748 294 aaKnown RBP eCLIP18.35■□□□□ 0.53
CHRNA5-202ENST00000394802 PITPNM1O00562 1244 aa18.32■□□□□ 0.52
CHRNA5-202ENST00000394802 NUBP1P53384 320 aa18.31■□□□□ 0.52
CHRNA5-202ENST00000394802 MNX1P50219 401 aaPredicted RBP18.27■□□□□ 0.52
CHRNA5-202ENST00000394802 HAP1P54257 671 aaPredicted RBP18.24■□□□□ 0.51
CHRNA5-202ENST00000394802 DCAF8Q5TAQ9 597 aa18.2■□□□□ 0.5
CHRNA5-202ENST00000394802 GSE1Q14687 1217 aa18.19■□□□□ 0.5
CHRNA5-202ENST00000394802 BBXQ8WY36 941 aaPredicted RBP18.19■□□□□ 0.5
CHRNA5-202ENST00000394802 TRIM41Q8WV44 630 aa18.15■□□□□ 0.5
CHRNA5-202ENST00000394802 RNF25Q96BH1 459 aaPredicted RBP18.14■□□□□ 0.49
CHRNA5-202ENST00000394802 CHGAP10645 457 aaKnown RBP18.13■□□□□ 0.49
CHRNA5-202ENST00000394802 RASEFQ8IZ41 740 aa18.12■□□□□ 0.49
CHRNA5-202ENST00000394802 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms