RNA–Protein interactions for RNA: ENST00000394326.2

BHLHE41-202, Transcript of basic helix-loop-helix family member e41, humanhuman

TSL 2

Gene BHLHE41, Length 350 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41-202ENST00000394326 AEBP2Q6ZN18 517 aaPredicted RBP25.89■■□□□ 1.74
BHLHE41-202ENST00000394326 CHIC1Q5VXU3 224 aa24.26■■□□□ 1.47
BHLHE41-202ENST00000394326 SENP3Q9H4L4 574 aaPredicted RBP22.04■■□□□ 1.12
BHLHE41-202ENST00000394326 PHF23Q9BUL5 403 aaPredicted RBP21.75■■□□□ 1.07
BHLHE41-202ENST00000394326 FOXD1Q16676 465 aa20.62■□□□□ 0.89
BHLHE41-202ENST00000394326 POTEDQ86YR6 584 aa19.52■□□□□ 0.72
BHLHE41-202ENST00000394326 MSH5O43196 834 aa19.34■□□□□ 0.69
BHLHE41-202ENST00000394326 PLPPR3Q6T4P5 718 aa19.21■□□□□ 0.67
BHLHE41-202ENST00000394326 PIAS4Q8N2W9 510 aaPredicted RBP19.13■□□□□ 0.65
BHLHE41-202ENST00000394326 PPP6R1Q9UPN7 881 aa19.11■□□□□ 0.65
BHLHE41-202ENST00000394326 ADRA2BP18089 450 aa18.98■□□□□ 0.63
BHLHE41-202ENST00000394326 MAPK8IP2Q13387 824 aaPredicted RBP17.54■□□□□ 0.4
BHLHE41-202ENST00000394326 DMRT2Q9Y5R5 561 aa17.47■□□□□ 0.39
BHLHE41-202ENST00000394326 SCAF1Q9H7N4 1312 aaKnown RBP17.29■□□□□ 0.36
BHLHE41-202ENST00000394326 CACNB1Q02641 598 aaPredicted RBP16.82■□□□□ 0.28
BHLHE41-202ENST00000394326 PPP4R3CPQ6ZMV5 832 aa16.82■□□□□ 0.28
BHLHE41-202ENST00000394326 HOXD11P31277 338 aaPredicted RBP16.74■□□□□ 0.27
BHLHE41-202ENST00000394326 DCAF8L1A6NGE4 600 aa16.64■□□□□ 0.25
BHLHE41-202ENST00000394326 CNKSR2Q8WXI2 1034 aa16.56■□□□□ 0.24
BHLHE41-202ENST00000394326 RNF39Q9H2S5 420 aa16.54■□□□□ 0.24
BHLHE41-202ENST00000394326 RNF216Q9NWF9 866 aaPredicted RBP16.51■□□□□ 0.23
BHLHE41-202ENST00000394326 C1QBPQ07021 282 aaKnown RBP16.25■□□□□ 0.19
BHLHE41-202ENST00000394326 DNAJC5BQ9UF47 199 aa16.23■□□□□ 0.19
BHLHE41-202ENST00000394326 NCBP3Q53F19 620 aaKnown RBP16.03■□□□□ 0.16
BHLHE41-202ENST00000394326 NPM3O75607 178 aaKnown RBP15.88■□□□□ 0.13
BHLHE41-202ENST00000394326 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.85■□□□□ 0.13
BHLHE41-202ENST00000394326 U3KPZ7 1027 aaPredicted RBP15.57■□□□□ 0.08
BHLHE41-202ENST00000394326 SPINK5Q9NQ38 1064 aaPredicted RBP15.42■□□□□ 0.06
BHLHE41-202ENST00000394326 DSG3P32926 999 aa15.39■□□□□ 0.05
BHLHE41-202ENST00000394326 CAPN15O75808 1086 aa15.32■□□□□ 0.04
BHLHE41-202ENST00000394326 KCNA4P22459 653 aa15.32■□□□□ 0.04
BHLHE41-202ENST00000394326 SLC4A2P04920 1241 aa15.28■□□□□ 0.04
BHLHE41-202ENST00000394326 POTEHQ6S545 545 aa15.24■□□□□ 0.03
BHLHE41-202ENST00000394326 TRHP20396 242 aaPredicted RBP15.02■□□□□ -0
BHLHE41-202ENST00000394326 ZNF219Q9P2Y4 722 aaPredicted RBP14.99□□□□□ -0.01
BHLHE41-202ENST00000394326 APLP2Q06481 763 aa14.98□□□□□ -0.01
BHLHE41-202ENST00000394326 ABCB7O75027 752 aa14.96□□□□□ -0.01
BHLHE41-202ENST00000394326 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.94□□□□□ -0.02
BHLHE41-202ENST00000394326 HNRNPUL2Q1KMD3 747 aaKnown RBP14.94□□□□□ -0.02
BHLHE41-202ENST00000394326 SAMD1Q6SPF0 538 aaPredicted RBP14.86□□□□□ -0.03
BHLHE41-202ENST00000394326 MYCNP04198 464 aaPredicted RBP14.64□□□□□ -0.07
BHLHE41-202ENST00000394326 RBM42Q9BTD8 480 aaKnown RBP14.61□□□□□ -0.07
BHLHE41-202ENST00000394326 POLA2Q14181 598 aa14.59□□□□□ -0.07
BHLHE41-202ENST00000394326 CHRDL2Q6WN34 429 aa14.44□□□□□ -0.1
BHLHE41-202ENST00000394326 ATF5Q9Y2D1 282 aaPredicted RBP14.4□□□□□ -0.1
BHLHE41-202ENST00000394326 SLC4A1APQ9BWU0 796 aaKnown RBP14.36□□□□□ -0.11
BHLHE41-202ENST00000394326 FOXD4L1Q9NU39 408 aa14.35□□□□□ -0.11
BHLHE41-202ENST00000394326 AKT1S1Q96B36 256 aa14.26□□□□□ -0.13
BHLHE41-202ENST00000394326 ZBTB12Q9Y330 459 aaPredicted RBP14.22□□□□□ -0.13
BHLHE41-202ENST00000394326 REM2Q8IYK8 340 aaPredicted RBP14.14□□□□□ -0.15
BHLHE41-202ENST00000394326 OSCARQ8IYS5 282 aa14.13□□□□□ -0.15
BHLHE41-202ENST00000394326 ZBTB22O15209 634 aa14.12□□□□□ -0.15
BHLHE41-202ENST00000394326 SP7Q8TDD2 431 aaPredicted RBP14.09□□□□□ -0.15
BHLHE41-202ENST00000394326 PIP4P2Q8N4L2 257 aa14.06□□□□□ -0.16
BHLHE41-202ENST00000394326 PITPNM1O00562 1244 aa13.99□□□□□ -0.17
BHLHE41-202ENST00000394326 ATXN8OSP0DMR3 200 aa13.96□□□□□ -0.17
BHLHE41-202ENST00000394326 FXR2P51116 673 aaKnown RBP eCLIP13.96□□□□□ -0.17
BHLHE41-202ENST00000394326 HAX1O00165 279 aa13.83□□□□□ -0.2
BHLHE41-202ENST00000394326 SPDYE2BA6NHP3 402 aa13.8□□□□□ -0.2
BHLHE41-202ENST00000394326 SPDYE6P0CI01 402 aa13.8□□□□□ -0.2
BHLHE41-202ENST00000394326 SPDYE2Q495Y8 402 aa13.8□□□□□ -0.2
BHLHE41-202ENST00000394326 FBLN2P98095 1184 aa13.74□□□□□ -0.21
BHLHE41-202ENST00000394326 EVX2Q03828 476 aa13.74□□□□□ -0.21
BHLHE41-202ENST00000394326 MKRN4PQ13434 485 aaPredicted RBP13.73□□□□□ -0.21
BHLHE41-202ENST00000394326 SSUH2Q9Y2M2 353 aa13.63□□□□□ -0.23
BHLHE41-202ENST00000394326 SPDYE1Q8NFV5 336 aaPredicted RBP13.61□□□□□ -0.23
BHLHE41-202ENST00000394326 PRKAR2AP13861 404 aaKnown RBP13.6□□□□□ -0.23
BHLHE41-202ENST00000394326 ZNF692Q9BU19 519 aaPredicted RBP13.58□□□□□ -0.24
BHLHE41-202ENST00000394326 CLEC11AQ9Y240 323 aa13.57□□□□□ -0.24
BHLHE41-202ENST00000394326 C19orf67A6NJJ6 358 aa13.51□□□□□ -0.25
BHLHE41-202ENST00000394326 CHADLQ6NUI6 762 aa13.4□□□□□ -0.26
BHLHE41-202ENST00000394326 GABBR2O75899 941 aa13.37□□□□□ -0.27
BHLHE41-202ENST00000394326 PABPN1Q86U42 306 aaKnown RBP eCLIP13.37□□□□□ -0.27
BHLHE41-202ENST00000394326 PRR29P0C7W0 189 aa13.33□□□□□ -0.28
BHLHE41-202ENST00000394326 LHX8Q68G74 356 aa13.21□□□□□ -0.29
BHLHE41-202ENST00000394326 CSRNP3Q8WYN3 585 aa13.21□□□□□ -0.29
BHLHE41-202ENST00000394326 FARP1Q9Y4F1 1045 aaPredicted RBP13.18□□□□□ -0.3
BHLHE41-202ENST00000394326 POTEIP0CG38 1075 aa13.13□□□□□ -0.31
BHLHE41-202ENST00000394326 CD44P16070 742 aaKnown RBP13.13□□□□□ -0.31
BHLHE41-202ENST00000394326 CLCN6P51797 869 aa13.06□□□□□ -0.32
BHLHE41-202ENST00000394326 CREBZFQ9NS37 354 aa13□□□□□ -0.33
BHLHE41-202ENST00000394326 ZNF579Q8NAF0 562 aaKnown RBP12.96□□□□□ -0.33
BHLHE41-202ENST00000394326 STAG3Q9UJ98 1225 aa12.92□□□□□ -0.34
BHLHE41-202ENST00000394326 ZRANB1Q9UGI0 708 aa12.9□□□□□ -0.34
BHLHE41-202ENST00000394326 DCBLD2Q96PD2 775 aa12.87□□□□□ -0.35
BHLHE41-202ENST00000394326 SPDYE4A6NLX3 237 aa12.86□□□□□ -0.35
BHLHE41-202ENST00000394326 GALR2O43603 387 aaPredicted RBP12.82□□□□□ -0.36
BHLHE41-202ENST00000394326 MNX1P50219 401 aaPredicted RBP12.78□□□□□ -0.36
BHLHE41-202ENST00000394326 EHMT2Q96KQ7 1210 aa12.78□□□□□ -0.36
BHLHE41-202ENST00000394326 PHF12Q96QT6 1004 aa12.73□□□□□ -0.37
BHLHE41-202ENST00000394326 POTEB2H3BUK9 544 aa12.69□□□□□ -0.38
BHLHE41-202ENST00000394326 PLSCR2Q9NRY7 297 aa12.69□□□□□ -0.38
BHLHE41-202ENST00000394326 OTUD5Q96G74 571 aa12.68□□□□□ -0.38
BHLHE41-202ENST00000394326 PAK3O75914 559 aaPredicted RBP12.67□□□□□ -0.38
BHLHE41-202ENST00000394326 NPM1P06748 294 aaKnown RBP eCLIP12.67□□□□□ -0.38
BHLHE41-202ENST00000394326 PELP1Q8IZL8 1130 aaKnown RBP12.64□□□□□ -0.39
BHLHE41-202ENST00000394326 PROM2Q8N271 834 aa12.6□□□□□ -0.39
BHLHE41-202ENST00000394326 ASTLQ6HA08 431 aaPredicted RBP12.55□□□□□ -0.4
BHLHE41-202ENST00000394326 MS4A3Q96HJ5 214 aa12.55□□□□□ -0.4
BHLHE41-202ENST00000394326 ATMINO43313 823 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms