RNA–Protein interactions for RNA: ENST00000382436.7

CBWD6-202, Transcript of COBW domain containing 6, humanhuman

TSL 1 (best)

Gene CBWD6, Length 1,554 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD6-202ENST00000382436 AEBP2Q6ZN18 517 aaPredicted RBP22.7■■□□□ 1.22
CBWD6-202ENST00000382436 CHIC1Q5VXU3 224 aa21.33■■□□□ 1.01
CBWD6-202ENST00000382436 SENP3Q9H4L4 574 aaPredicted RBP19.64■□□□□ 0.73
CBWD6-202ENST00000382436 PHF23Q9BUL5 403 aaPredicted RBP19.21■□□□□ 0.67
CBWD6-202ENST00000382436 POTEDQ86YR6 584 aa18.8■□□□□ 0.6
CBWD6-202ENST00000382436 FOXD1Q16676 465 aa18.35■□□□□ 0.53
CBWD6-202ENST00000382436 MSH5O43196 834 aa17.64■□□□□ 0.41
CBWD6-202ENST00000382436 PIAS4Q8N2W9 510 aaPredicted RBP16.94■□□□□ 0.3
CBWD6-202ENST00000382436 PPP6R1Q9UPN7 881 aa16.41■□□□□ 0.22
CBWD6-202ENST00000382436 ADRA2BP18089 450 aa16.34■□□□□ 0.21
CBWD6-202ENST00000382436 PLPPR3Q6T4P5 718 aa16.3■□□□□ 0.2
CBWD6-202ENST00000382436 CACNB1Q02641 598 aaPredicted RBP15.72■□□□□ 0.11
CBWD6-202ENST00000382436 DMRT2Q9Y5R5 561 aa15.39■□□□□ 0.05
CBWD6-202ENST00000382436 MAPK8IP2Q13387 824 aaPredicted RBP15.24■□□□□ 0.03
CBWD6-202ENST00000382436 SCAF1Q9H7N4 1312 aaKnown RBP15.05■□□□□ -0
CBWD6-202ENST00000382436 RNF39Q9H2S5 420 aa14.9□□□□□ -0.02
CBWD6-202ENST00000382436 DCAF8L1A6NGE4 600 aa14.82□□□□□ -0.04
CBWD6-202ENST00000382436 C1QBPQ07021 282 aaKnown RBP14.69□□□□□ -0.06
CBWD6-202ENST00000382436 POTEHQ6S545 545 aa14.56□□□□□ -0.08
CBWD6-202ENST00000382436 HOXD11P31277 338 aaPredicted RBP14.44□□□□□ -0.1
CBWD6-202ENST00000382436 DNAJC5BQ9UF47 199 aa14.21□□□□□ -0.14
CBWD6-202ENST00000382436 PPP4R3CPQ6ZMV5 832 aa14.2□□□□□ -0.14
CBWD6-202ENST00000382436 RNF216Q9NWF9 866 aaPredicted RBP14.13□□□□□ -0.15
CBWD6-202ENST00000382436 CNKSR2Q8WXI2 1034 aa14.09□□□□□ -0.15
CBWD6-202ENST00000382436 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.8□□□□□ -0.2
CBWD6-202ENST00000382436 DSG3P32926 999 aa13.62□□□□□ -0.23
CBWD6-202ENST00000382436 CAPN15O75808 1086 aa13.5□□□□□ -0.25
CBWD6-202ENST00000382436 NCBP3Q53F19 620 aaKnown RBP13.49□□□□□ -0.25
CBWD6-202ENST00000382436 SPINK5Q9NQ38 1064 aaPredicted RBP13.41□□□□□ -0.26
CBWD6-202ENST00000382436 U3KPZ7 1027 aaPredicted RBP13.35□□□□□ -0.27
CBWD6-202ENST00000382436 NPM3O75607 178 aaKnown RBP13.24□□□□□ -0.29
CBWD6-202ENST00000382436 SP7Q8TDD2 431 aaPredicted RBP13.2□□□□□ -0.3
CBWD6-202ENST00000382436 CHRDL2Q6WN34 429 aa13.15□□□□□ -0.3
CBWD6-202ENST00000382436 RBM42Q9BTD8 480 aaKnown RBP13.11□□□□□ -0.31
CBWD6-202ENST00000382436 ABCB7O75027 752 aa13.05□□□□□ -0.32
CBWD6-202ENST00000382436 TRHP20396 242 aaPredicted RBP13.04□□□□□ -0.32
CBWD6-202ENST00000382436 APLP2Q06481 763 aa13.02□□□□□ -0.33
CBWD6-202ENST00000382436 ZNF219Q9P2Y4 722 aaPredicted RBP13.02□□□□□ -0.33
CBWD6-202ENST00000382436 EHMT2Q96KQ7 1210 aa12.89□□□□□ -0.35
CBWD6-202ENST00000382436 SLC4A2P04920 1241 aa12.81□□□□□ -0.36
CBWD6-202ENST00000382436 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.79□□□□□ -0.36
CBWD6-202ENST00000382436 HNRNPUL2Q1KMD3 747 aaKnown RBP12.79□□□□□ -0.36
CBWD6-202ENST00000382436 KCNA4P22459 653 aa12.71□□□□□ -0.37
CBWD6-202ENST00000382436 HAX1O00165 279 aa12.69□□□□□ -0.38
CBWD6-202ENST00000382436 SAMD1Q6SPF0 538 aaPredicted RBP12.68□□□□□ -0.38
CBWD6-202ENST00000382436 PIP4P2Q8N4L2 257 aa12.6□□□□□ -0.39
CBWD6-202ENST00000382436 AKT1S1Q96B36 256 aa12.58□□□□□ -0.4
CBWD6-202ENST00000382436 POLA2Q14181 598 aa12.54□□□□□ -0.4
CBWD6-202ENST00000382436 REM2Q8IYK8 340 aaPredicted RBP12.43□□□□□ -0.42
CBWD6-202ENST00000382436 PLSCR2Q9NRY7 297 aa12.42□□□□□ -0.42
CBWD6-202ENST00000382436 FXR2P51116 673 aaKnown RBP eCLIP12.39□□□□□ -0.43
CBWD6-202ENST00000382436 LHX8Q68G74 356 aa12.38□□□□□ -0.43
CBWD6-202ENST00000382436 EVX2Q03828 476 aa12.35□□□□□ -0.43
CBWD6-202ENST00000382436 CSRNP3Q8WYN3 585 aa12.33□□□□□ -0.44
CBWD6-202ENST00000382436 PITPNM1O00562 1244 aa12.27□□□□□ -0.44
CBWD6-202ENST00000382436 MYCNP04198 464 aaPredicted RBP12.27□□□□□ -0.44
CBWD6-202ENST00000382436 ZBTB12Q9Y330 459 aaPredicted RBP12.23□□□□□ -0.45
CBWD6-202ENST00000382436 SLC4A1APQ9BWU0 796 aaKnown RBP12.22□□□□□ -0.45
CBWD6-202ENST00000382436 OSCARQ8IYS5 282 aa12.12□□□□□ -0.47
CBWD6-202ENST00000382436 GABBR2O75899 941 aa12.09□□□□□ -0.47
CBWD6-202ENST00000382436 C19orf67A6NJJ6 358 aa12.03□□□□□ -0.48
CBWD6-202ENST00000382436 ATF5Q9Y2D1 282 aaPredicted RBP12.02□□□□□ -0.49
CBWD6-202ENST00000382436 PRKAR2AP13861 404 aaKnown RBP11.97□□□□□ -0.49
CBWD6-202ENST00000382436 SLC24A1O60721 1099 aa11.83□□□□□ -0.52
CBWD6-202ENST00000382436 SPDYE2BA6NHP3 402 aa11.79□□□□□ -0.52
CBWD6-202ENST00000382436 SPDYE6P0CI01 402 aa11.79□□□□□ -0.52
CBWD6-202ENST00000382436 SPDYE2Q495Y8 402 aa11.79□□□□□ -0.52
CBWD6-202ENST00000382436 CLEC11AQ9Y240 323 aa11.79□□□□□ -0.52
CBWD6-202ENST00000382436 POTEIP0CG38 1075 aa11.77□□□□□ -0.53
CBWD6-202ENST00000382436 FOXD4L1Q9NU39 408 aa11.77□□□□□ -0.53
CBWD6-202ENST00000382436 SPDYE1Q8NFV5 336 aaPredicted RBP11.76□□□□□ -0.53
CBWD6-202ENST00000382436 ZBTB22O15209 634 aa11.71□□□□□ -0.53
CBWD6-202ENST00000382436 POTEMA6NI47 508 aa11.69□□□□□ -0.54
CBWD6-202ENST00000382436 CLCN6P51797 869 aa11.69□□□□□ -0.54
CBWD6-202ENST00000382436 NISCHQ9Y2I1 1504 aa11.67□□□□□ -0.54
CBWD6-202ENST00000382436 FBLN2P98095 1184 aa11.66□□□□□ -0.54
CBWD6-202ENST00000382436 PCDH10Q9P2E7 1040 aa11.66□□□□□ -0.54
CBWD6-202ENST00000382436 POTEGQ6S5H5 508 aa11.62□□□□□ -0.55
CBWD6-202ENST00000382436 DCBLD2Q96PD2 775 aa11.62□□□□□ -0.55
CBWD6-202ENST00000382436 RTN4Q9NQC3 1192 aaKnown RBP11.61□□□□□ -0.55
CBWD6-202ENST00000382436 CHADLQ6NUI6 762 aa11.6□□□□□ -0.55
CBWD6-202ENST00000382436 ZNF692Q9BU19 519 aaPredicted RBP11.56□□□□□ -0.56
CBWD6-202ENST00000382436 CD44P16070 742 aaKnown RBP11.54□□□□□ -0.56
CBWD6-202ENST00000382436 OTUD5Q96G74 571 aa11.54□□□□□ -0.56
CBWD6-202ENST00000382436 AMER1Q5JTC6 1135 aaPredicted RBP11.54□□□□□ -0.56
CBWD6-202ENST00000382436 SSUH2Q9Y2M2 353 aa11.52□□□□□ -0.57
CBWD6-202ENST00000382436 PRR29P0C7W0 189 aa11.5□□□□□ -0.57
CBWD6-202ENST00000382436 ATXN8OSP0DMR3 200 aa11.49□□□□□ -0.57
CBWD6-202ENST00000382436 MKRN4PQ13434 485 aaPredicted RBP11.43□□□□□ -0.58
CBWD6-202ENST00000382436 FARP1Q9Y4F1 1045 aaPredicted RBP11.37□□□□□ -0.59
CBWD6-202ENST00000382436 POTEB2H3BUK9 544 aa11.35□□□□□ -0.59
CBWD6-202ENST00000382436 PABPN1Q86U42 306 aaKnown RBP eCLIP11.35□□□□□ -0.59
CBWD6-202ENST00000382436 ZNF579Q8NAF0 562 aaKnown RBP11.32□□□□□ -0.6
CBWD6-202ENST00000382436 ZRANB1Q9UGI0 708 aa11.24□□□□□ -0.61
CBWD6-202ENST00000382436 GALR2O43603 387 aaPredicted RBP11.2□□□□□ -0.62
CBWD6-202ENST00000382436 MAMSTRQ6ZN01 415 aa11.18□□□□□ -0.62
CBWD6-202ENST00000382436 FAM163AQ96GL9 167 aaPredicted RBP11.17□□□□□ -0.62
CBWD6-202ENST00000382436 LCE2DQ5TA82 110 aaPredicted RBP11.12□□□□□ -0.63
CBWD6-202ENST00000382436 FKBP8Q14318 412 aa11.09□□□□□ -0.63
CBWD6-202ENST00000382436 PELP1Q8IZL8 1130 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms