RNA–Protein interactions for RNA: ENST00000382032.3

PUM3-201, Transcript of pumilio RNA binding family member 3, humanhuman

TSL 2

Gene PUM3, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-201ENST00000382032 AEBP2Q6ZN18 517 aaPredicted RBP18.09■□□□□ 0.49
PUM3-201ENST00000382032 CHIC1Q5VXU3 224 aa16.93■□□□□ 0.3
PUM3-201ENST00000382032 SENP3Q9H4L4 574 aaPredicted RBP15.58■□□□□ 0.08
PUM3-201ENST00000382032 PHF23Q9BUL5 403 aaPredicted RBP15.24■□□□□ 0.03
PUM3-201ENST00000382032 POTEDQ86YR6 584 aa14.92□□□□□ -0.02
PUM3-201ENST00000382032 FOXD1Q16676 465 aa14.54□□□□□ -0.08
PUM3-201ENST00000382032 MSH5O43196 834 aa13.9□□□□□ -0.18
PUM3-201ENST00000382032 PLPPR3Q6T4P5 718 aa13.43□□□□□ -0.26
PUM3-201ENST00000382032 PIAS4Q8N2W9 510 aaPredicted RBP13.42□□□□□ -0.26
PUM3-201ENST00000382032 PPP6R1Q9UPN7 881 aa13.11□□□□□ -0.31
PUM3-201ENST00000382032 ADRA2BP18089 450 aa13.01□□□□□ -0.33
PUM3-201ENST00000382032 DMRT2Q9Y5R5 561 aa12.26□□□□□ -0.45
PUM3-201ENST00000382032 CACNB1Q02641 598 aaPredicted RBP12.2□□□□□ -0.46
PUM3-201ENST00000382032 MAPK8IP2Q13387 824 aaPredicted RBP12.11□□□□□ -0.47
PUM3-201ENST00000382032 SCAF1Q9H7N4 1312 aaKnown RBP11.99□□□□□ -0.49
PUM3-201ENST00000382032 PPP4R3CPQ6ZMV5 832 aa11.8□□□□□ -0.52
PUM3-201ENST00000382032 RNF39Q9H2S5 420 aa11.8□□□□□ -0.52
PUM3-201ENST00000382032 DCAF8L1A6NGE4 600 aa11.63□□□□□ -0.55
PUM3-201ENST00000382032 C1QBPQ07021 282 aaKnown RBP11.61□□□□□ -0.55
PUM3-201ENST00000382032 HOXD11P31277 338 aaPredicted RBP11.6□□□□□ -0.55
PUM3-201ENST00000382032 CNKSR2Q8WXI2 1034 aa11.51□□□□□ -0.57
PUM3-201ENST00000382032 NCBP3Q53F19 620 aaKnown RBP11.46□□□□□ -0.57
PUM3-201ENST00000382032 DNAJC5BQ9UF47 199 aa11.43□□□□□ -0.58
PUM3-201ENST00000382032 POTEHQ6S545 545 aa11.37□□□□□ -0.59
PUM3-201ENST00000382032 RNF216Q9NWF9 866 aaPredicted RBP11.34□□□□□ -0.59
PUM3-201ENST00000382032 KCNA4P22459 653 aa11.3□□□□□ -0.6
PUM3-201ENST00000382032 NPM3O75607 178 aaKnown RBP11.26□□□□□ -0.61
PUM3-201ENST00000382032 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.95□□□□□ -0.66
PUM3-201ENST00000382032 DSG3P32926 999 aa10.82□□□□□ -0.68
PUM3-201ENST00000382032 SLC4A1APQ9BWU0 796 aaKnown RBP10.74□□□□□ -0.69
PUM3-201ENST00000382032 U3KPZ7 1027 aaPredicted RBP10.7□□□□□ -0.7
PUM3-201ENST00000382032 CAPN15O75808 1086 aa10.67□□□□□ -0.7
PUM3-201ENST00000382032 SPINK5Q9NQ38 1064 aaPredicted RBP10.67□□□□□ -0.7
PUM3-201ENST00000382032 SLC4A2P04920 1241 aa10.66□□□□□ -0.7
PUM3-201ENST00000382032 FOXD4L1Q9NU39 408 aa10.47□□□□□ -0.73
PUM3-201ENST00000382032 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.44□□□□□ -0.74
PUM3-201ENST00000382032 MYCNP04198 464 aaPredicted RBP10.44□□□□□ -0.74
PUM3-201ENST00000382032 HNRNPUL2Q1KMD3 747 aaKnown RBP10.44□□□□□ -0.74
PUM3-201ENST00000382032 APLP2Q06481 763 aa10.4□□□□□ -0.74
PUM3-201ENST00000382032 ZNF219Q9P2Y4 722 aaPredicted RBP10.4□□□□□ -0.74
PUM3-201ENST00000382032 SAMD1Q6SPF0 538 aaPredicted RBP10.39□□□□□ -0.75
PUM3-201ENST00000382032 RBM42Q9BTD8 480 aaKnown RBP10.38□□□□□ -0.75
PUM3-201ENST00000382032 ZBTB22O15209 634 aa10.37□□□□□ -0.75
PUM3-201ENST00000382032 ABCB7O75027 752 aa10.34□□□□□ -0.75
PUM3-201ENST00000382032 CHRDL2Q6WN34 429 aa10.34□□□□□ -0.75
PUM3-201ENST00000382032 TRHP20396 242 aaPredicted RBP10.33□□□□□ -0.76
PUM3-201ENST00000382032 SP7Q8TDD2 431 aaPredicted RBP10.28□□□□□ -0.76
PUM3-201ENST00000382032 EHMT2Q96KQ7 1210 aa10.22□□□□□ -0.77
PUM3-201ENST00000382032 PLSCR2Q9NRY7 297 aa10.22□□□□□ -0.77
PUM3-201ENST00000382032 CSRNP3Q8WYN3 585 aa10.14□□□□□ -0.79
PUM3-201ENST00000382032 ATF5Q9Y2D1 282 aaPredicted RBP10.13□□□□□ -0.79
PUM3-201ENST00000382032 ATXN8OSP0DMR3 200 aa10.1□□□□□ -0.79
PUM3-201ENST00000382032 POLA2Q14181 598 aa10.04□□□□□ -0.8
PUM3-201ENST00000382032 AKT1S1Q96B36 256 aa10□□□□□ -0.81
PUM3-201ENST00000382032 PIP4P2Q8N4L2 257 aa9.95□□□□□ -0.82
PUM3-201ENST00000382032 HAX1O00165 279 aa9.89□□□□□ -0.83
PUM3-201ENST00000382032 ZBTB12Q9Y330 459 aaPredicted RBP9.89□□□□□ -0.83
PUM3-201ENST00000382032 REM2Q8IYK8 340 aaPredicted RBP9.87□□□□□ -0.83
PUM3-201ENST00000382032 FXR2P51116 673 aaKnown RBP eCLIP9.84□□□□□ -0.83
PUM3-201ENST00000382032 FBLN2P98095 1184 aa9.77□□□□□ -0.85
PUM3-201ENST00000382032 PITPNM1O00562 1244 aa9.76□□□□□ -0.85
PUM3-201ENST00000382032 EVX2Q03828 476 aa9.73□□□□□ -0.85
PUM3-201ENST00000382032 OSCARQ8IYS5 282 aa9.73□□□□□ -0.85
PUM3-201ENST00000382032 MKRN4PQ13434 485 aaPredicted RBP9.68□□□□□ -0.86
PUM3-201ENST00000382032 LHX8Q68G74 356 aa9.62□□□□□ -0.87
PUM3-201ENST00000382032 SPDYE2BA6NHP3 402 aa9.59□□□□□ -0.87
PUM3-201ENST00000382032 SPDYE6P0CI01 402 aa9.59□□□□□ -0.87
PUM3-201ENST00000382032 SPDYE2Q495Y8 402 aa9.59□□□□□ -0.87
PUM3-201ENST00000382032 C19orf67A6NJJ6 358 aa9.55□□□□□ -0.88
PUM3-201ENST00000382032 ZNF692Q9BU19 519 aaPredicted RBP9.52□□□□□ -0.89
PUM3-201ENST00000382032 GABBR2O75899 941 aa9.51□□□□□ -0.89
PUM3-201ENST00000382032 PRKAR2AP13861 404 aaKnown RBP9.48□□□□□ -0.89
PUM3-201ENST00000382032 SSUH2Q9Y2M2 353 aa9.48□□□□□ -0.89
PUM3-201ENST00000382032 SPDYE1Q8NFV5 336 aaPredicted RBP9.41□□□□□ -0.9
PUM3-201ENST00000382032 SPDYE4A6NLX3 237 aa9.4□□□□□ -0.9
PUM3-201ENST00000382032 PABPN1Q86U42 306 aaKnown RBP eCLIP9.39□□□□□ -0.91
PUM3-201ENST00000382032 CLEC11AQ9Y240 323 aa9.35□□□□□ -0.91
PUM3-201ENST00000382032 POTEIP0CG38 1075 aa9.31□□□□□ -0.92
PUM3-201ENST00000382032 CLCN6P51797 869 aa9.29□□□□□ -0.92
PUM3-201ENST00000382032 PRR29P0C7W0 189 aa9.22□□□□□ -0.93
PUM3-201ENST00000382032 FKBP8Q14318 412 aa9.22□□□□□ -0.93
PUM3-201ENST00000382032 CHADLQ6NUI6 762 aa9.2□□□□□ -0.94
PUM3-201ENST00000382032 STAG3Q9UJ98 1225 aa9.2□□□□□ -0.94
PUM3-201ENST00000382032 PROM2Q8N271 834 aa9.18□□□□□ -0.94
PUM3-201ENST00000382032 CD44P16070 742 aaKnown RBP9.15□□□□□ -0.94
PUM3-201ENST00000382032 DCBLD2Q96PD2 775 aa9.11□□□□□ -0.95
PUM3-201ENST00000382032 POTEMA6NI47 508 aa9.08□□□□□ -0.96
PUM3-201ENST00000382032 OTUD5Q96G74 571 aa9.08□□□□□ -0.96
PUM3-201ENST00000382032 FARP1Q9Y4F1 1045 aaPredicted RBP9.08□□□□□ -0.96
PUM3-201ENST00000382032 ZNF579Q8NAF0 562 aaKnown RBP9.06□□□□□ -0.96
PUM3-201ENST00000382032 PCDH10Q9P2E7 1040 aa9.06□□□□□ -0.96
PUM3-201ENST00000382032 CREBZFQ9NS37 354 aa9.03□□□□□ -0.96
PUM3-201ENST00000382032 POTEGQ6S5H5 508 aa9.02□□□□□ -0.97
PUM3-201ENST00000382032 POTEB2H3BUK9 544 aa8.96□□□□□ -0.98
PUM3-201ENST00000382032 FBXO3Q9UK99 471 aa8.96□□□□□ -0.98
PUM3-201ENST00000382032 PLEKHG5O94827 1062 aa8.95□□□□□ -0.98
PUM3-201ENST00000382032 MIER1Q8N108 512 aa8.94□□□□□ -0.98
PUM3-201ENST00000382032 PLCD3Q8N3E9 789 aa8.92□□□□□ -0.98
PUM3-201ENST00000382032 NPM1P06748 294 aaKnown RBP eCLIP8.91□□□□□ -0.98
PUM3-201ENST00000382032 ZRANB1Q9UGI0 708 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms