RNA–Protein interactions for RNA: ENST00000381231.4

SMG1P1-204, Transcript of SMG1 pseudogene 1, humanhuman

TSL 2

Gene SMG1P1, Length 720 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P1-204ENST00000381231 AEBP2Q6ZN18 517 aaPredicted RBP27.78■■■□□ 2.04
SMG1P1-204ENST00000381231 CHIC1Q5VXU3 224 aa26.66■■□□□ 1.86
SMG1P1-204ENST00000381231 SENP3Q9H4L4 574 aaPredicted RBP23.61■■□□□ 1.37
SMG1P1-204ENST00000381231 PHF23Q9BUL5 403 aaPredicted RBP23.42■■□□□ 1.34
SMG1P1-204ENST00000381231 FOXD1Q16676 465 aa22■■□□□ 1.11
SMG1P1-204ENST00000381231 PLPPR3Q6T4P5 718 aa21.47■■□□□ 1.03
SMG1P1-204ENST00000381231 ADRA2BP18089 450 aa20.84■□□□□ 0.93
SMG1P1-204ENST00000381231 PPP6R1Q9UPN7 881 aa20.84■□□□□ 0.93
SMG1P1-204ENST00000381231 PIAS4Q8N2W9 510 aaPredicted RBP20.69■□□□□ 0.9
SMG1P1-204ENST00000381231 MSH5O43196 834 aa20.42■□□□□ 0.86
SMG1P1-204ENST00000381231 POTEDQ86YR6 584 aa19.41■□□□□ 0.7
SMG1P1-204ENST00000381231 MAPK8IP2Q13387 824 aaPredicted RBP19.04■□□□□ 0.64
SMG1P1-204ENST00000381231 SCAF1Q9H7N4 1312 aaKnown RBP18.99■□□□□ 0.63
SMG1P1-204ENST00000381231 PPP4R3CPQ6ZMV5 832 aa18.89■□□□□ 0.61
SMG1P1-204ENST00000381231 DMRT2Q9Y5R5 561 aa18.77■□□□□ 0.6
SMG1P1-204ENST00000381231 CNKSR2Q8WXI2 1034 aa18.42■□□□□ 0.54
SMG1P1-204ENST00000381231 NCBP3Q53F19 620 aaKnown RBP18.24■□□□□ 0.51
SMG1P1-204ENST00000381231 HOXD11P31277 338 aaPredicted RBP18.17■□□□□ 0.5
SMG1P1-204ENST00000381231 DCAF8L1A6NGE4 600 aa18.16■□□□□ 0.5
SMG1P1-204ENST00000381231 RNF216Q9NWF9 866 aaPredicted RBP18.15■□□□□ 0.5
SMG1P1-204ENST00000381231 NPM3O75607 178 aaKnown RBP18■□□□□ 0.47
SMG1P1-204ENST00000381231 KCNA4P22459 653 aa17.99■□□□□ 0.47
SMG1P1-204ENST00000381231 RNF39Q9H2S5 420 aa17.45■□□□□ 0.38
SMG1P1-204ENST00000381231 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.44■□□□□ 0.38
SMG1P1-204ENST00000381231 CACNB1Q02641 598 aaPredicted RBP17.41■□□□□ 0.38
SMG1P1-204ENST00000381231 DNAJC5BQ9UF47 199 aa17.36■□□□□ 0.37
SMG1P1-204ENST00000381231 C1QBPQ07021 282 aaKnown RBP17.2■□□□□ 0.34
SMG1P1-204ENST00000381231 SLC4A2P04920 1241 aa17.09■□□□□ 0.33
SMG1P1-204ENST00000381231 U3KPZ7 1027 aaPredicted RBP17.07■□□□□ 0.32
SMG1P1-204ENST00000381231 SLC4A1APQ9BWU0 796 aaKnown RBP17.05■□□□□ 0.32
SMG1P1-204ENST00000381231 SPINK5Q9NQ38 1064 aaPredicted RBP16.77■□□□□ 0.28
SMG1P1-204ENST00000381231 CAPN15O75808 1086 aa16.75■□□□□ 0.27
SMG1P1-204ENST00000381231 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.65■□□□□ 0.26
SMG1P1-204ENST00000381231 HNRNPUL2Q1KMD3 747 aaKnown RBP16.65■□□□□ 0.26
SMG1P1-204ENST00000381231 FOXD4L1Q9NU39 408 aa16.64■□□□□ 0.25
SMG1P1-204ENST00000381231 MYCNP04198 464 aaPredicted RBP16.63■□□□□ 0.25
SMG1P1-204ENST00000381231 TRHP20396 242 aaPredicted RBP16.59■□□□□ 0.25
SMG1P1-204ENST00000381231 APLP2Q06481 763 aa16.58■□□□□ 0.24
SMG1P1-204ENST00000381231 SAMD1Q6SPF0 538 aaPredicted RBP16.58■□□□□ 0.24
SMG1P1-204ENST00000381231 ZBTB22O15209 634 aa16.53■□□□□ 0.24
SMG1P1-204ENST00000381231 DSG3P32926 999 aa16.48■□□□□ 0.23
SMG1P1-204ENST00000381231 ZNF219Q9P2Y4 722 aaPredicted RBP16.45■□□□□ 0.22
SMG1P1-204ENST00000381231 ABCB7O75027 752 aa16.43■□□□□ 0.22
SMG1P1-204ENST00000381231 ATF5Q9Y2D1 282 aaPredicted RBP16.27■□□□□ 0.2
SMG1P1-204ENST00000381231 POLA2Q14181 598 aa16.16■□□□□ 0.18
SMG1P1-204ENST00000381231 EHMT2Q96KQ7 1210 aa16.16■□□□□ 0.18
SMG1P1-204ENST00000381231 CSRNP3Q8WYN3 585 aa16.06■□□□□ 0.16
SMG1P1-204ENST00000381231 ATXN8OSP0DMR3 200 aa16.01■□□□□ 0.15
SMG1P1-204ENST00000381231 ZBTB12Q9Y330 459 aaPredicted RBP15.78■□□□□ 0.12
SMG1P1-204ENST00000381231 RBM42Q9BTD8 480 aaKnown RBP15.7■□□□□ 0.1
SMG1P1-204ENST00000381231 OSCARQ8IYS5 282 aa15.65■□□□□ 0.1
SMG1P1-204ENST00000381231 FBLN2P98095 1184 aa15.59■□□□□ 0.09
SMG1P1-204ENST00000381231 MKRN4PQ13434 485 aaPredicted RBP15.5■□□□□ 0.07
SMG1P1-204ENST00000381231 AKT1S1Q96B36 256 aa15.4■□□□□ 0.06
SMG1P1-204ENST00000381231 SPDYE2BA6NHP3 402 aa15.32■□□□□ 0.04
SMG1P1-204ENST00000381231 SPDYE6P0CI01 402 aa15.32■□□□□ 0.04
SMG1P1-204ENST00000381231 SPDYE2Q495Y8 402 aa15.32■□□□□ 0.04
SMG1P1-204ENST00000381231 REM2Q8IYK8 340 aaPredicted RBP15.3■□□□□ 0.04
SMG1P1-204ENST00000381231 POTEHQ6S545 545 aa15.29■□□□□ 0.04
SMG1P1-204ENST00000381231 ZNF692Q9BU19 519 aaPredicted RBP15.27■□□□□ 0.04
SMG1P1-204ENST00000381231 CHRDL2Q6WN34 429 aa15.26■□□□□ 0.03
SMG1P1-204ENST00000381231 PITPNM1O00562 1244 aa15.15■□□□□ 0.02
SMG1P1-204ENST00000381231 SSUH2Q9Y2M2 353 aa15.14■□□□□ 0.01
SMG1P1-204ENST00000381231 CLEC11AQ9Y240 323 aa15.08■□□□□ 0
SMG1P1-204ENST00000381231 PABPN1Q86U42 306 aaKnown RBP eCLIP15.06■□□□□ 0
SMG1P1-204ENST00000381231 SPDYE1Q8NFV5 336 aaPredicted RBP15.01□□□□□ -0.01
SMG1P1-204ENST00000381231 SPDYE4A6NLX3 237 aa14.98□□□□□ -0.01
SMG1P1-204ENST00000381231 PIP4P2Q8N4L2 257 aa14.97□□□□□ -0.01
SMG1P1-204ENST00000381231 FXR2P51116 673 aaKnown RBP eCLIP14.89□□□□□ -0.03
SMG1P1-204ENST00000381231 PRR29P0C7W0 189 aa14.81□□□□□ -0.04
SMG1P1-204ENST00000381231 PRKAR2AP13861 404 aaKnown RBP14.79□□□□□ -0.04
SMG1P1-204ENST00000381231 CHADLQ6NUI6 762 aa14.74□□□□□ -0.05
SMG1P1-204ENST00000381231 HAX1O00165 279 aa14.68□□□□□ -0.06
SMG1P1-204ENST00000381231 STAG3Q9UJ98 1225 aa14.64□□□□□ -0.07
SMG1P1-204ENST00000381231 FKBP8Q14318 412 aa14.62□□□□□ -0.07
SMG1P1-204ENST00000381231 PROM2Q8N271 834 aa14.52□□□□□ -0.09
SMG1P1-204ENST00000381231 EVX2Q03828 476 aa14.49□□□□□ -0.09
SMG1P1-204ENST00000381231 SP7Q8TDD2 431 aaPredicted RBP14.48□□□□□ -0.09
SMG1P1-204ENST00000381231 CREBZFQ9NS37 354 aa14.48□□□□□ -0.09
SMG1P1-204ENST00000381231 FARP1Q9Y4F1 1045 aaPredicted RBP14.47□□□□□ -0.09
SMG1P1-204ENST00000381231 C19orf67A6NJJ6 358 aa14.4□□□□□ -0.1
SMG1P1-204ENST00000381231 CD44P16070 742 aaKnown RBP14.34□□□□□ -0.11
SMG1P1-204ENST00000381231 MIER1Q8N108 512 aa14.28□□□□□ -0.12
SMG1P1-204ENST00000381231 NPM1P06748 294 aaKnown RBP eCLIP14.23□□□□□ -0.13
SMG1P1-204ENST00000381231 MNX1P50219 401 aaPredicted RBP14.23□□□□□ -0.13
SMG1P1-204ENST00000381231 PLCD3Q8N3E9 789 aa14.23□□□□□ -0.13
SMG1P1-204ENST00000381231 PLEKHG5O94827 1062 aa14.21□□□□□ -0.13
SMG1P1-204ENST00000381231 ZRANB1Q9UGI0 708 aa14.2□□□□□ -0.14
SMG1P1-204ENST00000381231 GABBR2O75899 941 aa14.15□□□□□ -0.14
SMG1P1-204ENST00000381231 PAK3O75914 559 aaPredicted RBP14.15□□□□□ -0.14
SMG1P1-204ENST00000381231 FBXO3Q9UK99 471 aa14.13□□□□□ -0.15
SMG1P1-204ENST00000381231 TSPYL2Q9H2G4 693 aaPredicted RBP14.08□□□□□ -0.16
SMG1P1-204ENST00000381231 ZNF579Q8NAF0 562 aaKnown RBP14.06□□□□□ -0.16
SMG1P1-204ENST00000381231 PHF12Q96QT6 1004 aa14.05□□□□□ -0.16
SMG1P1-204ENST00000381231 ZBTB47Q9UFB7 747 aaPredicted RBP14□□□□□ -0.17
SMG1P1-204ENST00000381231 VASPP50552 380 aaPredicted RBP13.99□□□□□ -0.17
SMG1P1-204ENST00000381231 RASEFQ8IZ41 740 aa13.98□□□□□ -0.17
SMG1P1-204ENST00000381231 GALR2O43603 387 aaPredicted RBP13.94□□□□□ -0.18
SMG1P1-204ENST00000381231 KLHL34Q8N239 644 aa13.93□□□□□ -0.18
SMG1P1-204ENST00000381231 CLCN6P51797 869 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms