RNA–Protein interactions for RNA: ENST00000380270.3

FAM208B-202, Transcript of family with sequence similarity 208 member B, humanhuman

TSL 3

Gene FAM208B, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM208B-202ENST00000380270 AEBP2Q6ZN18 517 aaPredicted RBP22.58■■□□□ 1.21
FAM208B-202ENST00000380270 CHIC1Q5VXU3 224 aa21.08■□□□□ 0.97
FAM208B-202ENST00000380270 SENP3Q9H4L4 574 aaPredicted RBP19.31■□□□□ 0.68
FAM208B-202ENST00000380270 PHF23Q9BUL5 403 aaPredicted RBP19.01■□□□□ 0.63
FAM208B-202ENST00000380270 FOXD1Q16676 465 aa18.05■□□□□ 0.48
FAM208B-202ENST00000380270 POTEDQ86YR6 584 aa17.25■□□□□ 0.35
FAM208B-202ENST00000380270 MSH5O43196 834 aa17.02■□□□□ 0.32
FAM208B-202ENST00000380270 PIAS4Q8N2W9 510 aaPredicted RBP16.78■□□□□ 0.28
FAM208B-202ENST00000380270 PLPPR3Q6T4P5 718 aa16.67■□□□□ 0.26
FAM208B-202ENST00000380270 PPP6R1Q9UPN7 881 aa16.6■□□□□ 0.25
FAM208B-202ENST00000380270 ADRA2BP18089 450 aa16.53■□□□□ 0.24
FAM208B-202ENST00000380270 MAPK8IP2Q13387 824 aaPredicted RBP15.3■□□□□ 0.04
FAM208B-202ENST00000380270 DMRT2Q9Y5R5 561 aa15.26■□□□□ 0.03
FAM208B-202ENST00000380270 SCAF1Q9H7N4 1312 aaKnown RBP15.12■□□□□ 0.01
FAM208B-202ENST00000380270 CACNB1Q02641 598 aaPredicted RBP14.85□□□□□ -0.03
FAM208B-202ENST00000380270 DCAF8L1A6NGE4 600 aa14.67□□□□□ -0.06
FAM208B-202ENST00000380270 PPP4R3CPQ6ZMV5 832 aa14.58□□□□□ -0.08
FAM208B-202ENST00000380270 HOXD11P31277 338 aaPredicted RBP14.55□□□□□ -0.08
FAM208B-202ENST00000380270 RNF39Q9H2S5 420 aa14.5□□□□□ -0.09
FAM208B-202ENST00000380270 CNKSR2Q8WXI2 1034 aa14.38□□□□□ -0.11
FAM208B-202ENST00000380270 RNF216Q9NWF9 866 aaPredicted RBP14.34□□□□□ -0.11
FAM208B-202ENST00000380270 C1QBPQ07021 282 aaKnown RBP14.26□□□□□ -0.13
FAM208B-202ENST00000380270 DNAJC5BQ9UF47 199 aa14.11□□□□□ -0.15
FAM208B-202ENST00000380270 NCBP3Q53F19 620 aaKnown RBP13.9□□□□□ -0.18
FAM208B-202ENST00000380270 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.88□□□□□ -0.191e-11■■■■■ 36.5
FAM208B-202ENST00000380270 NPM3O75607 178 aaKnown RBP13.69□□□□□ -0.22
FAM208B-202ENST00000380270 U3KPZ7 1027 aaPredicted RBP13.54□□□□□ -0.24
FAM208B-202ENST00000380270 DSG3P32926 999 aa13.46□□□□□ -0.25
FAM208B-202ENST00000380270 CAPN15O75808 1086 aa13.45□□□□□ -0.26
FAM208B-202ENST00000380270 POTEHQ6S545 545 aa13.45□□□□□ -0.26
FAM208B-202ENST00000380270 SPINK5Q9NQ38 1064 aaPredicted RBP13.45□□□□□ -0.26
FAM208B-202ENST00000380270 SLC4A2P04920 1241 aa13.18□□□□□ -0.3
FAM208B-202ENST00000380270 TRHP20396 242 aaPredicted RBP13.15□□□□□ -0.3
FAM208B-202ENST00000380270 ABCB7O75027 752 aa13.11□□□□□ -0.31
FAM208B-202ENST00000380270 KCNA4P22459 653 aa13.11□□□□□ -0.31
FAM208B-202ENST00000380270 APLP2Q06481 763 aa13.1□□□□□ -0.31
FAM208B-202ENST00000380270 ZNF219Q9P2Y4 722 aaPredicted RBP13.09□□□□□ -0.31
FAM208B-202ENST00000380270 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.01□□□□□ -0.33
FAM208B-202ENST00000380270 HNRNPUL2Q1KMD3 747 aaKnown RBP13.01□□□□□ -0.33
FAM208B-202ENST00000380270 SAMD1Q6SPF0 538 aaPredicted RBP12.92□□□□□ -0.34
FAM208B-202ENST00000380270 RBM42Q9BTD8 480 aaKnown RBP12.84□□□□□ -0.35
FAM208B-202ENST00000380270 POLA2Q14181 598 aa12.72□□□□□ -0.37
FAM208B-202ENST00000380270 CHRDL2Q6WN34 429 aa12.72□□□□□ -0.37
FAM208B-202ENST00000380270 MYCNP04198 464 aaPredicted RBP12.67□□□□□ -0.38
FAM208B-202ENST00000380270 AKT1S1Q96B36 256 aa12.47□□□□□ -0.41
FAM208B-202ENST00000380270 SP7Q8TDD2 431 aaPredicted RBP12.43□□□□□ -0.42
FAM208B-202ENST00000380270 ATF5Q9Y2D1 282 aaPredicted RBP12.42□□□□□ -0.42
FAM208B-202ENST00000380270 ZBTB12Q9Y330 459 aaPredicted RBP12.41□□□□□ -0.42
FAM208B-202ENST00000380270 REM2Q8IYK8 340 aaPredicted RBP12.37□□□□□ -0.43
FAM208B-202ENST00000380270 PIP4P2Q8N4L2 257 aa12.34□□□□□ -0.43
FAM208B-202ENST00000380270 FOXD4L1Q9NU39 408 aa12.34□□□□□ -0.43
FAM208B-202ENST00000380270 OSCARQ8IYS5 282 aa12.32□□□□□ -0.44
FAM208B-202ENST00000380270 SLC4A1APQ9BWU0 796 aaKnown RBP12.31□□□□□ -0.44
FAM208B-202ENST00000380270 PITPNM1O00562 1244 aa12.23□□□□□ -0.45
FAM208B-202ENST00000380270 HAX1O00165 279 aa12.22□□□□□ -0.45
FAM208B-202ENST00000380270 FXR2P51116 673 aaKnown RBP eCLIP12.2□□□□□ -0.462e-6■■□□□ 12.9
FAM208B-202ENST00000380270 ZBTB22O15209 634 aa12.05□□□□□ -0.48
FAM208B-202ENST00000380270 EVX2Q03828 476 aa12.04□□□□□ -0.48
FAM208B-202ENST00000380270 SPDYE2BA6NHP3 402 aa12□□□□□ -0.49
FAM208B-202ENST00000380270 SPDYE6P0CI01 402 aa12□□□□□ -0.49
FAM208B-202ENST00000380270 ATXN8OSP0DMR3 200 aa12□□□□□ -0.49
FAM208B-202ENST00000380270 SPDYE2Q495Y8 402 aa12□□□□□ -0.49
FAM208B-202ENST00000380270 FBLN2P98095 1184 aa11.96□□□□□ -0.49
FAM208B-202ENST00000380270 PRKAR2AP13861 404 aaKnown RBP11.92□□□□□ -0.5
FAM208B-202ENST00000380270 CLEC11AQ9Y240 323 aa11.9□□□□□ -0.5
FAM208B-202ENST00000380270 SPDYE1Q8NFV5 336 aaPredicted RBP11.89□□□□□ -0.51
FAM208B-202ENST00000380270 C19orf67A6NJJ6 358 aa11.83□□□□□ -0.52
FAM208B-202ENST00000380270 MKRN4PQ13434 485 aaPredicted RBP11.82□□□□□ -0.52
FAM208B-202ENST00000380270 ZNF692Q9BU19 519 aaPredicted RBP11.8□□□□□ -0.52
FAM208B-202ENST00000380270 SSUH2Q9Y2M2 353 aa11.79□□□□□ -0.52
FAM208B-202ENST00000380270 GABBR2O75899 941 aa11.75□□□□□ -0.53
FAM208B-202ENST00000380270 CHADLQ6NUI6 762 aa11.7□□□□□ -0.54
FAM208B-202ENST00000380270 LHX8Q68G74 356 aa11.66□□□□□ -0.54
FAM208B-202ENST00000380270 PRR29P0C7W0 189 aa11.64□□□□□ -0.55
FAM208B-202ENST00000380270 PABPN1Q86U42 306 aaKnown RBP eCLIP11.63□□□□□ -0.55
FAM208B-202ENST00000380270 CD44P16070 742 aaKnown RBP11.51□□□□□ -0.57
FAM208B-202ENST00000380270 FARP1Q9Y4F1 1045 aaPredicted RBP11.5□□□□□ -0.57
FAM208B-202ENST00000380270 POTEIP0CG38 1075 aa11.49□□□□□ -0.57
FAM208B-202ENST00000380270 CLCN6P51797 869 aa11.42□□□□□ -0.58
FAM208B-202ENST00000380270 DCBLD2Q96PD2 775 aa11.35□□□□□ -0.59
FAM208B-202ENST00000380270 ZNF579Q8NAF0 562 aaKnown RBP11.31□□□□□ -0.6
FAM208B-202ENST00000380270 ZRANB1Q9UGI0 708 aa11.3□□□□□ -0.6
FAM208B-202ENST00000380270 CREBZFQ9NS37 354 aa11.26□□□□□ -0.61
FAM208B-202ENST00000380270 PLSCR2Q9NRY7 297 aa11.23□□□□□ -0.61
FAM208B-202ENST00000380270 GALR2O43603 387 aaPredicted RBP11.21□□□□□ -0.61
FAM208B-202ENST00000380270 STAG3Q9UJ98 1225 aa11.21□□□□□ -0.61
FAM208B-202ENST00000380270 CSRNP3Q8WYN3 585 aa11.16□□□□□ -0.62
FAM208B-202ENST00000380270 OTUD5Q96G74 571 aa11.14□□□□□ -0.63
FAM208B-202ENST00000380270 PAK3O75914 559 aaPredicted RBP11.12□□□□□ -0.63
FAM208B-202ENST00000380270 PHF12Q96QT6 1004 aa11.12□□□□□ -0.63
FAM208B-202ENST00000380270 POTEB2H3BUK9 544 aa11.11□□□□□ -0.63
FAM208B-202ENST00000380270 SPDYE4A6NLX3 237 aa11.08□□□□□ -0.64
FAM208B-202ENST00000380270 NPM1P06748 294 aaKnown RBP eCLIP11.05□□□□□ -0.64
FAM208B-202ENST00000380270 PELP1Q8IZL8 1130 aaKnown RBP11.03□□□□□ -0.64
FAM208B-202ENST00000380270 MNX1P50219 401 aaPredicted RBP11.01□□□□□ -0.65
FAM208B-202ENST00000380270 POTEMA6NI47 508 aa11□□□□□ -0.65
FAM208B-202ENST00000380270 POTEGQ6S5H5 508 aa10.96□□□□□ -0.65
FAM208B-202ENST00000380270 MS4A3Q96HJ5 214 aa10.95□□□□□ -0.66
FAM208B-202ENST00000380270 ASTLQ6HA08 431 aaPredicted RBP10.94□□□□□ -0.66
FAM208B-202ENST00000380270 METRNQ9UJH8 293 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms