RNA–Protein interactions for RNA: ENST00000361029.8

TRDN-202, Transcript of triadin, humanhuman

TSL 5

Gene TRDN, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRDN-202ENST00000361029 AEBP2Q6ZN18 517 aaPredicted RBP32.82■■■□□ 2.84
TRDN-202ENST00000361029 CHIC1Q5VXU3 224 aa31.56■■■□□ 2.64
TRDN-202ENST00000361029 SENP3Q9H4L4 574 aaPredicted RBP27.91■■■□□ 2.06
TRDN-202ENST00000361029 PHF23Q9BUL5 403 aaPredicted RBP27.72■■■□□ 2.03
TRDN-202ENST00000361029 FOXD1Q16676 465 aa25.97■■□□□ 1.75
TRDN-202ENST00000361029 PLPPR3Q6T4P5 718 aa25.39■■□□□ 1.66
TRDN-202ENST00000361029 PPP6R1Q9UPN7 881 aa24.62■■□□□ 1.53
TRDN-202ENST00000361029 ADRA2BP18089 450 aa24.54■■□□□ 1.52
TRDN-202ENST00000361029 PIAS4Q8N2W9 510 aaPredicted RBP24.35■■□□□ 1.49
TRDN-202ENST00000361029 MSH5O43196 834 aa24.13■■□□□ 1.45
TRDN-202ENST00000361029 POTEDQ86YR6 584 aa22.86■■□□□ 1.25
TRDN-202ENST00000361029 SCAF1Q9H7N4 1312 aaKnown RBP22.43■■□□□ 1.18
TRDN-202ENST00000361029 MAPK8IP2Q13387 824 aaPredicted RBP22.42■■□□□ 1.18
TRDN-202ENST00000361029 PPP4R3CPQ6ZMV5 832 aa22.31■■□□□ 1.16
TRDN-202ENST00000361029 DMRT2Q9Y5R5 561 aa22.21■■□□□ 1.15
TRDN-202ENST00000361029 CNKSR2Q8WXI2 1034 aa21.8■■□□□ 1.08
TRDN-202ENST00000361029 HOXD11P31277 338 aaPredicted RBP21.57■■□□□ 1.04
TRDN-202ENST00000361029 NCBP3Q53F19 620 aaKnown RBP21.56■■□□□ 1.04
TRDN-202ENST00000361029 RNF216Q9NWF9 866 aaPredicted RBP21.51■■□□□ 1.03
TRDN-202ENST00000361029 NPM3O75607 178 aaKnown RBP21.28■■□□□ 1
TRDN-202ENST00000361029 KCNA4P22459 653 aa21.23■□□□□ 0.99
TRDN-202ENST00000361029 DCAF8L1A6NGE4 600 aa21.21■□□□□ 0.99
TRDN-202ENST00000361029 DNAJC5BQ9UF47 199 aa20.79■□□□□ 0.92
TRDN-202ENST00000361029 RNF39Q9H2S5 420 aa20.65■□□□□ 0.9
TRDN-202ENST00000361029 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.49■□□□□ 0.87
TRDN-202ENST00000361029 CACNB1Q02641 598 aaPredicted RBP20.43■□□□□ 0.86
TRDN-202ENST00000361029 C1QBPQ07021 282 aaKnown RBP20.36■□□□□ 0.85
TRDN-202ENST00000361029 SLC4A2P04920 1241 aa20.23■□□□□ 0.83
TRDN-202ENST00000361029 U3KPZ7 1027 aaPredicted RBP20.15■□□□□ 0.82
TRDN-202ENST00000361029 SLC4A1APQ9BWU0 796 aaKnown RBP20.11■□□□□ 0.81
TRDN-202ENST00000361029 SPINK5Q9NQ38 1064 aaPredicted RBP19.73■□□□□ 0.75
TRDN-202ENST00000361029 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.7■□□□□ 0.74
TRDN-202ENST00000361029 HNRNPUL2Q1KMD3 747 aaKnown RBP19.7■□□□□ 0.74
TRDN-202ENST00000361029 FOXD4L1Q9NU39 408 aa19.68■□□□□ 0.74
TRDN-202ENST00000361029 MYCNP04198 464 aaPredicted RBP19.66■□□□□ 0.74
TRDN-202ENST00000361029 CAPN15O75808 1086 aa19.64■□□□□ 0.73
TRDN-202ENST00000361029 SAMD1Q6SPF0 538 aaPredicted RBP19.61■□□□□ 0.73
TRDN-202ENST00000361029 APLP2Q06481 763 aa19.6■□□□□ 0.73
TRDN-202ENST00000361029 ZBTB22O15209 634 aa19.55■□□□□ 0.72
TRDN-202ENST00000361029 DSG3P32926 999 aa19.47■□□□□ 0.71
TRDN-202ENST00000361029 ZNF219Q9P2Y4 722 aaPredicted RBP19.43■□□□□ 0.7
TRDN-202ENST00000361029 TRHP20396 242 aaPredicted RBP19.42■□□□□ 0.7
TRDN-202ENST00000361029 ABCB7O75027 752 aa19.23■□□□□ 0.67
TRDN-202ENST00000361029 ATF5Q9Y2D1 282 aaPredicted RBP19.19■□□□□ 0.66
TRDN-202ENST00000361029 ATXN8OSP0DMR3 200 aa19.06■□□□□ 0.64
TRDN-202ENST00000361029 POLA2Q14181 598 aa19.02■□□□□ 0.64
TRDN-202ENST00000361029 CSRNP3Q8WYN3 585 aa19.02■□□□□ 0.64
TRDN-202ENST00000361029 EHMT2Q96KQ7 1210 aa18.94■□□□□ 0.62
TRDN-202ENST00000361029 ZBTB12Q9Y330 459 aaPredicted RBP18.67■□□□□ 0.58
TRDN-202ENST00000361029 RBM42Q9BTD8 480 aaKnown RBP18.54■□□□□ 0.56
TRDN-202ENST00000361029 OSCARQ8IYS5 282 aa18.4■□□□□ 0.54
TRDN-202ENST00000361029 FBLN2P98095 1184 aa18.38■□□□□ 0.53
TRDN-202ENST00000361029 MKRN4PQ13434 485 aaPredicted RBP18.34■□□□□ 0.53
TRDN-202ENST00000361029 AKT1S1Q96B36 256 aa18.23■□□□□ 0.51
TRDN-202ENST00000361029 SPDYE2BA6NHP3 402 aa18.14■□□□□ 0.49
TRDN-202ENST00000361029 SPDYE6P0CI01 402 aa18.14■□□□□ 0.49
TRDN-202ENST00000361029 SPDYE2Q495Y8 402 aa18.14■□□□□ 0.49
TRDN-202ENST00000361029 REM2Q8IYK8 340 aaPredicted RBP18.05■□□□□ 0.48
TRDN-202ENST00000361029 POTEHQ6S545 545 aa17.99■□□□□ 0.47
TRDN-202ENST00000361029 CHRDL2Q6WN34 429 aa17.98■□□□□ 0.47
TRDN-202ENST00000361029 ZNF692Q9BU19 519 aaPredicted RBP17.97■□□□□ 0.47
TRDN-202ENST00000361029 SSUH2Q9Y2M2 353 aa17.96■□□□□ 0.47
TRDN-202ENST00000361029 PITPNM1O00562 1244 aa17.85■□□□□ 0.45
TRDN-202ENST00000361029 PABPN1Q86U42 306 aaKnown RBP eCLIP17.72■□□□□ 0.43
TRDN-202ENST00000361029 SPDYE1Q8NFV5 336 aaPredicted RBP17.71■□□□□ 0.43
TRDN-202ENST00000361029 SPDYE4A6NLX3 237 aa17.65■□□□□ 0.42
TRDN-202ENST00000361029 PIP4P2Q8N4L2 257 aa17.65■□□□□ 0.42
TRDN-202ENST00000361029 FXR2P51116 673 aaKnown RBP eCLIP17.64■□□□□ 0.41
TRDN-202ENST00000361029 CLEC11AQ9Y240 323 aa17.63■□□□□ 0.41
TRDN-202ENST00000361029 PRR29P0C7W0 189 aa17.41■□□□□ 0.38
TRDN-202ENST00000361029 PRKAR2AP13861 404 aaKnown RBP17.38■□□□□ 0.37
TRDN-202ENST00000361029 PROM2Q8N271 834 aa17.35■□□□□ 0.37
TRDN-202ENST00000361029 STAG3Q9UJ98 1225 aa17.33■□□□□ 0.36
TRDN-202ENST00000361029 CHADLQ6NUI6 762 aa17.27■□□□□ 0.36
TRDN-202ENST00000361029 FKBP8Q14318 412 aa17.19■□□□□ 0.34
TRDN-202ENST00000361029 HAX1O00165 279 aa17.18■□□□□ 0.34
TRDN-202ENST00000361029 CREBZFQ9NS37 354 aa17.11■□□□□ 0.33
TRDN-202ENST00000361029 FARP1Q9Y4F1 1045 aaPredicted RBP17.07■□□□□ 0.32
TRDN-202ENST00000361029 SP7Q8TDD2 431 aaPredicted RBP17.06■□□□□ 0.32
TRDN-202ENST00000361029 C19orf67A6NJJ6 358 aa17.05■□□□□ 0.32
TRDN-202ENST00000361029 EVX2Q03828 476 aa17.05■□□□□ 0.32
TRDN-202ENST00000361029 MNX1P50219 401 aaPredicted RBP16.9■□□□□ 0.3
TRDN-202ENST00000361029 CD44P16070 742 aaKnown RBP16.85■□□□□ 0.29
TRDN-202ENST00000361029 NPM1P06748 294 aaKnown RBP eCLIP16.78■□□□□ 0.28
TRDN-202ENST00000361029 MIER1Q8N108 512 aa16.77■□□□□ 0.28
TRDN-202ENST00000361029 PLEKHG5O94827 1062 aa16.71■□□□□ 0.27
TRDN-202ENST00000361029 FBXO3Q9UK99 471 aa16.71■□□□□ 0.27
TRDN-202ENST00000361029 PLCD3Q8N3E9 789 aa16.68■□□□□ 0.26
TRDN-202ENST00000361029 GABBR2O75899 941 aa16.67■□□□□ 0.26
TRDN-202ENST00000361029 ZRANB1Q9UGI0 708 aa16.67■□□□□ 0.26
TRDN-202ENST00000361029 ZNF579Q8NAF0 562 aaKnown RBP16.64■□□□□ 0.25
TRDN-202ENST00000361029 PAK3O75914 559 aaPredicted RBP16.61■□□□□ 0.25
TRDN-202ENST00000361029 CLCN6P51797 869 aa16.57■□□□□ 0.24
TRDN-202ENST00000361029 ZBTB47Q9UFB7 747 aaPredicted RBP16.55■□□□□ 0.24
TRDN-202ENST00000361029 VASPP50552 380 aaPredicted RBP16.51■□□□□ 0.23
TRDN-202ENST00000361029 PHF12Q96QT6 1004 aa16.48■□□□□ 0.23
TRDN-202ENST00000361029 TSPYL2Q9H2G4 693 aaPredicted RBP16.48■□□□□ 0.23
TRDN-202ENST00000361029 RASEFQ8IZ41 740 aa16.47■□□□□ 0.23
TRDN-202ENST00000361029 NUBP1P53384 320 aa16.44■□□□□ 0.22
TRDN-202ENST00000361029 CCDC61Q9Y6R9 512 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms