RNA–Protein interactions for RNA: ENSMUST00000205118.2

Smarcad1-215, Transcript of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1, mouse

TSL 2 BASIC

Gene Smarcad1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (Experimental data)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
Smarcad1-215	ENSMUST00000205118	Gm35339	A0A140LHH9	1649 aa		15.79	■□□□□ 0.12
Smarcad1-215	ENSMUST00000205118	Nisch	Q80TM9	1593 aa		15.64	■□□□□ 0.09
Smarcad1-215	ENSMUST00000205118	Abcc9	P70170	1546 aa		15.22	■□□□□ 0.03
Smarcad1-215	ENSMUST00000205118	Abcc8	B2RUS7	1588 aa		14.99	□□□□□ -0.01
Smarcad1-215	ENSMUST00000205118	Scrib	Q80U72	1612 aa		14.15	□□□□□ -0.14
Smarcad1-215	ENSMUST00000205118	Dcaf1	Q80TR8	1506 aa		14.12	□□□□□ -0.15
Smarcad1-215	ENSMUST00000205118	Ccdc180	J3QNE4	1664 aa		13.85	□□□□□ -0.19
Smarcad1-215	ENSMUST00000205118	Nacad	Q5SWP3	1504 aa		13.85	□□□□□ -0.19
Smarcad1-215	ENSMUST00000205118	Kdm5d	Q62240	1548 aa		13.78	□□□□□ -0.2
Smarcad1-215	ENSMUST00000205118	Rhox8	Q6VSS7	320 aa		13.74	□□□□□ -0.21
Smarcad1-215	ENSMUST00000205118	Rtl1	Q7M732	1744 aa		13.7	□□□□□ -0.22
Smarcad1-215	ENSMUST00000205118	Rb1cc1	Q9ESK9	1588 aa		13.65	□□□□□ -0.22
Smarcad1-215	ENSMUST00000205118	Crybg2	B7ZCC2	1516 aa		13.59	□□□□□ -0.23
Smarcad1-215	ENSMUST00000205118	Baz1a	O88379	1555 aa		13.55	□□□□□ -0.24
Smarcad1-215	ENSMUST00000205118	Sycp2	Q9CUU3	1500 aa		13.52	□□□□□ -0.25
Smarcad1-215	ENSMUST00000205118	Bicra	F8VPZ9	1578 aa		13.21	□□□□□ -0.29
Smarcad1-215	ENSMUST00000205118	Smarca2	Q6DIC0	1577 aa		13.2	□□□□□ -0.3
Smarcad1-215	ENSMUST00000205118	Zcchc6	Q5BLK4	1491 aa	Known RBP	13.1	□□□□□ -0.31
Smarcad1-215	ENSMUST00000205118	Brd4	Q9ESU6	1400 aa	Known RBP	12.87	□□□□□ -0.35
Smarcad1-215	ENSMUST00000205118	Smarca4	Q3TKT4	1613 aa	Known RBP	12.85	□□□□□ -0.35
Smarcad1-215	ENSMUST00000205118	Trim41	Q5NCC3	630 aa		12.83	□□□□□ -0.36
Smarcad1-215	ENSMUST00000205118	Pds5b	Q4VA53	1446 aa	Known RBP	12.82	□□□□□ -0.36
Smarcad1-215	ENSMUST00000205118	Cecr2	E9Q2Z1	1453 aa		12.81	□□□□□ -0.36
Smarcad1-215	ENSMUST00000205118	Atad2b	E9Q166	1460 aa	Known RBP	12.78	□□□□□ -0.36
Smarcad1-215	ENSMUST00000205118	Cttnbp2	B9EJA2	1648 aa		12.76	□□□□□ -0.37
Smarcad1-215	ENSMUST00000205118	Ccdc136	Q3TVA9	1136 aa		12.75	□□□□□ -0.37
Smarcad1-215	ENSMUST00000205118	Cftr	P26361	1476 aa		12.71	□□□□□ -0.38
Smarcad1-215	ENSMUST00000205118	Iqgap2	Q3UQ44	1575 aa		12.68	□□□□□ -0.38
Smarcad1-215	ENSMUST00000205118	Synj1	Q8CHC4	1574 aa		12.68	□□□□□ -0.38
Smarcad1-215	ENSMUST00000205118	Hrc	G5E8J6	738 aa		12.62	□□□□□ -0.39
Smarcad1-215	ENSMUST00000205118	Golga3	P55937	1487 aa		12.53	□□□□□ -0.4
Smarcad1-215	ENSMUST00000205118	Wdr62	Q3U3T8	1523 aa		12.52	□□□□□ -0.4
Smarcad1-215	ENSMUST00000205118	Ercc6	F8VPZ5	1481 aa		12.52	□□□□□ -0.41
Smarcad1-215	ENSMUST00000205118	Top2b	Q64511	1612 aa		12.51	□□□□□ -0.41
Smarcad1-215	ENSMUST00000205118	Thoc2	B1AZI6	1594 aa	Known RBP	12.51	□□□□□ -0.41
Smarcad1-215	ENSMUST00000205118	Frmpd1	A2AKB4	1549 aa		12.47	□□□□□ -0.41
Smarcad1-215	ENSMUST00000205118	Baz1b	Q9Z277	1479 aa		12.46	□□□□□ -0.42
Smarcad1-215	ENSMUST00000205118	Esf1	Q3V1V3	845 aa	Known RBP	12.38	□□□□□ -0.43
Smarcad1-215	ENSMUST00000205118	Unc13a	Q4KUS2	1712 aa		12.36	□□□□□ -0.43
Smarcad1-215	ENSMUST00000205118	Fam135a	Q6NS59	1506 aa		12.35	□□□□□ -0.43
Smarcad1-215	ENSMUST00000205118	Cep164	Q5DU05	1446 aa		12.34	□□□□□ -0.43
Smarcad1-215	ENSMUST00000205118	Fmn1	Q05860	1466 aa		12.34	□□□□□ -0.43
Smarcad1-215	ENSMUST00000205118	Phldb1	Q6PDH0	1371 aa	Known RBP	12.33	□□□□□ -0.44
Smarcad1-215	ENSMUST00000205118	Tnn	Q80Z71	1560 aa		12.3	□□□□□ -0.44
Smarcad1-215	ENSMUST00000205118	Lamc3	Q9R0B6	1581 aa		12.3	□□□□□ -0.44
Smarcad1-215	ENSMUST00000205118	Cc2d2a	Q8CFW7	1633 aa		12.27	□□□□□ -0.44
Smarcad1-215	ENSMUST00000205118	Cngb1	E1AZ71	1325 aa		12.26	□□□□□ -0.45
Smarcad1-215	ENSMUST00000205118	Rsf1	E9PWW9	1441 aa	Known RBP	12.26	□□□□□ -0.45
Smarcad1-215	ENSMUST00000205118	Chic1	Q8CBW7	227 aa		12.21	□□□□□ -0.45
Smarcad1-215	ENSMUST00000205118	Ccdc88b	Q4QRL3	1481 aa		12.2	□□□□□ -0.46
Smarcad1-215	ENSMUST00000205118	Mapk8ip2	Q9ERE9	830 aa		12.19	□□□□□ -0.46
Smarcad1-215	ENSMUST00000205118	Top2a	Q01320	1528 aa	Known RBP	12.17	□□□□□ -0.46
Smarcad1-215	ENSMUST00000205118	Kif15	Q6P9L6	1387 aa		12.12	□□□□□ -0.47
Smarcad1-215	ENSMUST00000205118	Ccdc18	Q640L5	1455 aa		12.08	□□□□□ -0.47
Smarcad1-215	ENSMUST00000205118	Ubl4b	Q9CQ84	188 aa		12.08	□□□□□ -0.48
Smarcad1-215	ENSMUST00000205118	Camsap1	A2AHC3	1581 aa		12.08	□□□□□ -0.48
Smarcad1-215	ENSMUST00000205118	Cux2	P70298	1426 aa		12.02	□□□□□ -0.49
Smarcad1-215	ENSMUST00000205118	Nrk	Q9R0G8	1455 aa		12.02	□□□□□ -0.49
Smarcad1-215	ENSMUST00000205118	Mrc2	Q64449	1479 aa		12.01	□□□□□ -0.49
Smarcad1-215	ENSMUST00000205118	Rapgef2	Q8CHG7	1496 aa		11.98	□□□□□ -0.49
Smarcad1-215	ENSMUST00000205118	Grin2b	Q01097	1482 aa		11.95	□□□□□ -0.5
Smarcad1-215	ENSMUST00000205118	Npm1	Q61937	292 aa	Known RBP	11.93	□□□□□ -0.5
Smarcad1-215	ENSMUST00000205118	Dnajc5b	Q9CQ94	199 aa		11.93	□□□□□ -0.5
Smarcad1-215	ENSMUST00000205118	Efcab5	A0JP43	1406 aa		11.92	□□□□□ -0.5
Smarcad1-215	ENSMUST00000205118	Lrpprc	Q6PB66	1392 aa	Known RBP	11.92	□□□□□ -0.5
Smarcad1-215	ENSMUST00000205118	Shroom4	Q1W617	1475 aa		11.91	□□□□□ -0.5
Smarcad1-215	ENSMUST00000205118	Eif4g1	Q6NZJ6	1600 aa	Known RBP	11.91	□□□□□ -0.5
Smarcad1-215	ENSMUST00000205118	Pogz	Q8BZH4	1409 aa	Known RBP	11.88	□□□□□ -0.51
Smarcad1-215	ENSMUST00000205118	Map3k1	P53349	1493 aa		11.87	□□□□□ -0.51
Smarcad1-215	ENSMUST00000205118	Cep162	Q6ZQ06	1403 aa		11.85	□□□□□ -0.51
Smarcad1-215	ENSMUST00000205118	Kif21a	Q9QXL2	1672 aa		11.84	□□□□□ -0.51
Smarcad1-215	ENSMUST00000205118	Duox2	A2AQ99	1517 aa		11.82	□□□□□ -0.52
Smarcad1-215	ENSMUST00000205118	Crocc2	F6XLV1	1638 aa		11.82	□□□□□ -0.52
Smarcad1-215	ENSMUST00000205118	Dhx29	Q6PGC1	1365 aa	Known RBP	11.8	□□□□□ -0.52
Smarcad1-215	ENSMUST00000205118	Ptprk	P35822	1457 aa		11.79	□□□□□ -0.52
Smarcad1-215	ENSMUST00000205118	Aqr	Q8CFQ3	1481 aa	Known RBP	11.79	□□□□□ -0.52
Smarcad1-215	ENSMUST00000205118	Gab3	Q8BSM5	595 aa		11.79	□□□□□ -0.52
Smarcad1-215	ENSMUST00000205118	Mroh2b	Q7M6Y6	1581 aa		11.79	□□□□□ -0.52
Smarcad1-215	ENSMUST00000205118	Il27	Q8K3I6	234 aa		11.77	□□□□□ -0.53
Smarcad1-215	ENSMUST00000205118	Arhgap35	Q91YM2	1499 aa		11.76	□□□□□ -0.53
Smarcad1-215	ENSMUST00000205118	Gpatch8	A2A6A1	1505 aa		11.76	□□□□□ -0.53
Smarcad1-215	ENSMUST00000205118	Pbrm1	Q8BSQ9	1634 aa	Known RBP	11.75	□□□□□ -0.53
Smarcad1-215	ENSMUST00000205118	Npm2	Q80W85	207 aa		11.74	□□□□□ -0.53
Smarcad1-215	ENSMUST00000205118	Synm	Q70IV5	1561 aa		11.72	□□□□□ -0.53
Smarcad1-215	ENSMUST00000205118	Polr1a	O35134	1717 aa	Known RBP	11.71	□□□□□ -0.54
Smarcad1-215	ENSMUST00000205118	Samd9l	Q69Z37	1561 aa		11.71	□□□□□ -0.54
Smarcad1-215	ENSMUST00000205118	Lrriq1	Q0P5X1	1673 aa		11.7	□□□□□ -0.54
Smarcad1-215	ENSMUST00000205118	Ift140	E9PY46	1464 aa		11.7	□□□□□ -0.54
Smarcad1-215	ENSMUST00000205118	Clip1	Q922J3	1391 aa		11.68	□□□□□ -0.54
Smarcad1-215	ENSMUST00000205118	Rpap1	Q80TE0	1409 aa		11.68	□□□□□ -0.54
Smarcad1-215	ENSMUST00000205118	Carmil1	Q6EDY6	1374 aa		11.67	□□□□□ -0.54
Smarcad1-215	ENSMUST00000205118	Urb2	E9Q7L1	1524 aa	Known RBP	11.67	□□□□□ -0.54
Smarcad1-215	ENSMUST00000205118	Plb1	Q3TTY0	1478 aa		11.65	□□□□□ -0.54
Smarcad1-215	ENSMUST00000205118	Setd1b	Q8CFT2	1985 aa		11.64	□□□□□ -0.55
Smarcad1-215	ENSMUST00000205118	Erich3	F6QRE9	1637 aa		11.64	□□□□□ -0.55
Smarcad1-215	ENSMUST00000205118	Disp1	Q3TDN0	1521 aa		11.62	□□□□□ -0.55
Smarcad1-215	ENSMUST00000205118	Eprs	Q8CGC7	1512 aa	Known RBP	11.62	□□□□□ -0.55
Smarcad1-215	ENSMUST00000205118	Eea1	Q8BL66	1411 aa		11.61	□□□□□ -0.55
Smarcad1-215	ENSMUST00000205118	Magi3	Q9EQJ9	1476 aa		11.6	□□□□□ -0.55
Smarcad1-215	ENSMUST00000205118	Nup160	Q9Z0W3	1402 aa	Known RBP	11.6	□□□□□ -0.55

Retrieved 100 of 22,080 RNA–protein pairs in 79.8 ms