RNA–Protein interactions for RNA: ENSMUST00000201690.1

Traf1-209, Transcript of TNF receptor-associated factor 1, mousemouse

TSL 3 BASIC

Gene Traf1, Length 386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1-209ENSMUST00000201690 Gm35339A0A140LHH9 1649 aa15.71■□□□□ 0.11
Traf1-209ENSMUST00000201690 NischQ80TM9 1593 aa15.65■□□□□ 0.1
Traf1-209ENSMUST00000201690 Abcc9P70170 1546 aa15.22■□□□□ 0.03
Traf1-209ENSMUST00000201690 Abcc8B2RUS7 1588 aa15.01□□□□□ -0.01
Traf1-209ENSMUST00000201690 ScribQ80U72 1612 aa14.24□□□□□ -0.13
Traf1-209ENSMUST00000201690 Dcaf1Q80TR8 1506 aa13.96□□□□□ -0.17
Traf1-209ENSMUST00000201690 Kdm5dQ62240 1548 aa13.9□□□□□ -0.19
Traf1-209ENSMUST00000201690 NacadQ5SWP3 1504 aa13.87□□□□□ -0.19
Traf1-209ENSMUST00000201690 Rhox8Q6VSS7 320 aa13.86□□□□□ -0.19
Traf1-209ENSMUST00000201690 Rb1cc1Q9ESK9 1588 aa13.71□□□□□ -0.22
Traf1-209ENSMUST00000201690 Sycp2Q9CUU3 1500 aa13.57□□□□□ -0.24
Traf1-209ENSMUST00000201690 Ccdc180J3QNE4 1664 aa13.56□□□□□ -0.24
Traf1-209ENSMUST00000201690 Baz1aO88379 1555 aa13.53□□□□□ -0.24
Traf1-209ENSMUST00000201690 Crybg2B7ZCC2 1516 aa13.37□□□□□ -0.27
Traf1-209ENSMUST00000201690 Rtl1Q7M732 1744 aa13.36□□□□□ -0.27
Traf1-209ENSMUST00000201690 BicraF8VPZ9 1578 aa13.28□□□□□ -0.28
Traf1-209ENSMUST00000201690 Zcchc6Q5BLK4 1491 aaKnown RBP13.27□□□□□ -0.29
Traf1-209ENSMUST00000201690 Smarca2Q6DIC0 1577 aa13.17□□□□□ -0.3
Traf1-209ENSMUST00000201690 Dnajc5bQ9CQ94 199 aa13.12□□□□□ -0.31
Traf1-209ENSMUST00000201690 Smarca4Q3TKT4 1613 aaKnown RBP12.9□□□□□ -0.34
Traf1-209ENSMUST00000201690 Cecr2E9Q2Z1 1453 aa12.9□□□□□ -0.34
Traf1-209ENSMUST00000201690 Pds5bQ4VA53 1446 aaKnown RBP12.89□□□□□ -0.35
Traf1-209ENSMUST00000201690 Ccdc136Q3TVA9 1136 aa12.85□□□□□ -0.35
Traf1-209ENSMUST00000201690 Atad2bE9Q166 1460 aaKnown RBP12.84□□□□□ -0.35
Traf1-209ENSMUST00000201690 Brd4Q9ESU6 1400 aaKnown RBP12.83□□□□□ -0.36
Traf1-209ENSMUST00000201690 Thoc2B1AZI6 1594 aaKnown RBP12.81□□□□□ -0.36
Traf1-209ENSMUST00000201690 Chic1Q8CBW7 227 aa12.79□□□□□ -0.36
Traf1-209ENSMUST00000201690 Iqgap2Q3UQ44 1575 aa12.78□□□□□ -0.36
Traf1-209ENSMUST00000201690 Cttnbp2B9EJA2 1648 aa12.74□□□□□ -0.37
Traf1-209ENSMUST00000201690 Synj1Q8CHC4 1574 aa12.74□□□□□ -0.37
Traf1-209ENSMUST00000201690 CftrP26361 1476 aa12.72□□□□□ -0.37
Traf1-209ENSMUST00000201690 Trim41Q5NCC3 630 aa12.71□□□□□ -0.37
Traf1-209ENSMUST00000201690 Ercc6F8VPZ5 1481 aa12.69□□□□□ -0.38
Traf1-209ENSMUST00000201690 Cc2d2aQ8CFW7 1633 aa12.64□□□□□ -0.39
Traf1-209ENSMUST00000201690 Wdr62Q3U3T8 1523 aa12.61□□□□□ -0.39
Traf1-209ENSMUST00000201690 Frmpd1A2AKB4 1549 aa12.54□□□□□ -0.4
Traf1-209ENSMUST00000201690 Golga3P55937 1487 aa12.5□□□□□ -0.41
Traf1-209ENSMUST00000201690 Esf1Q3V1V3 845 aaKnown RBP12.49□□□□□ -0.41
Traf1-209ENSMUST00000201690 Fam135aQ6NS59 1506 aa12.47□□□□□ -0.41
Traf1-209ENSMUST00000201690 Top2bQ64511 1612 aa12.43□□□□□ -0.42
Traf1-209ENSMUST00000201690 Cngb1E1AZ71 1325 aa12.41□□□□□ -0.42
Traf1-209ENSMUST00000201690 Phldb1Q6PDH0 1371 aaKnown RBP12.4□□□□□ -0.42
Traf1-209ENSMUST00000201690 Baz1bQ9Z277 1479 aa12.37□□□□□ -0.43
Traf1-209ENSMUST00000201690 Unc13aQ4KUS2 1712 aa12.36□□□□□ -0.43
Traf1-209ENSMUST00000201690 Rsf1E9PWW9 1441 aaKnown RBP12.31□□□□□ -0.44
Traf1-209ENSMUST00000201690 Fmn1Q05860 1466 aa12.31□□□□□ -0.44
Traf1-209ENSMUST00000201690 HrcG5E8J6 738 aa12.3□□□□□ -0.44
Traf1-209ENSMUST00000201690 TnnQ80Z71 1560 aa12.28□□□□□ -0.44
Traf1-209ENSMUST00000201690 Lamc3Q9R0B6 1581 aa12.28□□□□□ -0.44
Traf1-209ENSMUST00000201690 Ubl4bQ9CQ84 188 aa12.26□□□□□ -0.45
Traf1-209ENSMUST00000201690 Kif15Q6P9L6 1387 aa12.24□□□□□ -0.45
Traf1-209ENSMUST00000201690 Cep164Q5DU05 1446 aa12.22□□□□□ -0.45
Traf1-209ENSMUST00000201690 Ccdc88bQ4QRL3 1481 aa12.21□□□□□ -0.46
Traf1-209ENSMUST00000201690 Mrc2Q64449 1479 aa12.2□□□□□ -0.46
Traf1-209ENSMUST00000201690 Cux2P70298 1426 aa12.14□□□□□ -0.47
Traf1-209ENSMUST00000201690 Dnajc5P60904 198 aa12.14□□□□□ -0.47
Traf1-209ENSMUST00000201690 Top2aQ01320 1528 aaKnown RBP12.14□□□□□ -0.47
Traf1-209ENSMUST00000201690 Mapk8ip2Q9ERE9 830 aa12.13□□□□□ -0.47
Traf1-209ENSMUST00000201690 Ccdc18Q640L5 1455 aa12.13□□□□□ -0.47
Traf1-209ENSMUST00000201690 Camsap1A2AHC3 1581 aa12.12□□□□□ -0.47
Traf1-209ENSMUST00000201690 Npm1Q61937 292 aaKnown RBP12.01□□□□□ -0.49
Traf1-209ENSMUST00000201690 Lrriq1Q0P5X1 1673 aa12□□□□□ -0.49
Traf1-209ENSMUST00000201690 Il27Q8K3I6 234 aa12□□□□□ -0.49
Traf1-209ENSMUST00000201690 Grin2bQ01097 1482 aa11.98□□□□□ -0.49
Traf1-209ENSMUST00000201690 Kif21aQ9QXL2 1672 aa11.97□□□□□ -0.49
Traf1-209ENSMUST00000201690 LrpprcQ6PB66 1392 aaKnown RBP11.95□□□□□ -0.5
Traf1-209ENSMUST00000201690 NrkQ9R0G8 1455 aa11.93□□□□□ -0.5
Traf1-209ENSMUST00000201690 PogzQ8BZH4 1409 aaKnown RBP11.93□□□□□ -0.5
Traf1-209ENSMUST00000201690 Dhx29Q6PGC1 1365 aaKnown RBP11.92□□□□□ -0.5
Traf1-209ENSMUST00000201690 Shroom4Q1W617 1475 aa11.91□□□□□ -0.5
Traf1-209ENSMUST00000201690 Gab3Q8BSM5 595 aa11.91□□□□□ -0.5
Traf1-209ENSMUST00000201690 Crocc2F6XLV1 1638 aa11.89□□□□□ -0.51
Traf1-209ENSMUST00000201690 Rapgef2Q8CHG7 1496 aa11.89□□□□□ -0.51
Traf1-209ENSMUST00000201690 Duox2A2AQ99 1517 aa11.86□□□□□ -0.51
Traf1-209ENSMUST00000201690 Efcab5A0JP43 1406 aa11.85□□□□□ -0.51
Traf1-209ENSMUST00000201690 Npm2Q80W85 207 aa11.84□□□□□ -0.51
Traf1-209ENSMUST00000201690 PtprkP35822 1457 aa11.83□□□□□ -0.52
Traf1-209ENSMUST00000201690 Samd9lQ69Z37 1561 aa11.82□□□□□ -0.52
Traf1-209ENSMUST00000201690 Eif4g3Q80XI3 1579 aaKnown RBP11.8□□□□□ -0.52
Traf1-209ENSMUST00000201690 Eif4g1Q6NZJ6 1600 aaKnown RBP11.79□□□□□ -0.52
Traf1-209ENSMUST00000201690 Cep162Q6ZQ06 1403 aa11.79□□□□□ -0.52
Traf1-209ENSMUST00000201690 Map3k1P53349 1493 aa11.79□□□□□ -0.52
Traf1-209ENSMUST00000201690 Urb2E9Q7L1 1524 aaKnown RBP11.79□□□□□ -0.52
Traf1-209ENSMUST00000201690 Plb1Q3TTY0 1478 aa11.78□□□□□ -0.52
Traf1-209ENSMUST00000201690 Ift140E9PY46 1464 aa11.76□□□□□ -0.53
Traf1-209ENSMUST00000201690 Arhgap35Q91YM2 1499 aa11.76□□□□□ -0.53
Traf1-209ENSMUST00000201690 SynmQ70IV5 1561 aa11.75□□□□□ -0.53
Traf1-209ENSMUST00000201690 Zeb1Q64318 1117 aa11.74□□□□□ -0.53
Traf1-209ENSMUST00000201690 Shroom2A2ALU4 1481 aa11.74□□□□□ -0.53
Traf1-209ENSMUST00000201690 Mroh2bQ7M6Y6 1581 aa11.73□□□□□ -0.53
Traf1-209ENSMUST00000201690 Pbrm1Q8BSQ9 1634 aaKnown RBP11.72□□□□□ -0.53
Traf1-209ENSMUST00000201690 AqrQ8CFQ3 1481 aaKnown RBP11.72□□□□□ -0.53
Traf1-209ENSMUST00000201690 Gpatch8A2A6A1 1505 aa11.69□□□□□ -0.54
Traf1-209ENSMUST00000201690 Rad54l2Q99NG0 1466 aa11.68□□□□□ -0.54
Traf1-209ENSMUST00000201690 Disp1Q3TDN0 1521 aa11.67□□□□□ -0.54
Traf1-209ENSMUST00000201690 Grin2aP35436 1464 aa11.67□□□□□ -0.54
Traf1-209ENSMUST00000201690 Magi3Q9EQJ9 1476 aa11.67□□□□□ -0.54
Traf1-209ENSMUST00000201690 Rusc2Q80U22 1514 aa11.66□□□□□ -0.54
Traf1-209ENSMUST00000201690 Myt1lP97500 1187 aa11.66□□□□□ -0.54
Traf1-209ENSMUST00000201690 Carmil1Q6EDY6 1374 aa11.66□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 321.2 ms