RNA–Protein interactions for RNA: ENSMUST00000200418.1

Gm43854-201, mousemouse

BASIC

Gene Gm43854, Length 394 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm43854-201ENSMUST00000200418 Gm35339A0A140LHH9 1649 aa25.25■■□□□ 1.63
Gm43854-201ENSMUST00000200418 NischQ80TM9 1593 aa24.54■■□□□ 1.52
Gm43854-201ENSMUST00000200418 Abcc9P70170 1546 aa24.43■■□□□ 1.5
Gm43854-201ENSMUST00000200418 Abcc8B2RUS7 1588 aa23.99■■□□□ 1.43
Gm43854-201ENSMUST00000200418 ScribQ80U72 1612 aa23.73■■□□□ 1.39
Gm43854-201ENSMUST00000200418 Dnajc5bQ9CQ94 199 aa22.98■■□□□ 1.27
Gm43854-201ENSMUST00000200418 NacadQ5SWP3 1504 aa22.69■■□□□ 1.22
Gm43854-201ENSMUST00000200418 Kdm5dQ62240 1548 aa22.67■■□□□ 1.22
Gm43854-201ENSMUST00000200418 Sycp2Q9CUU3 1500 aa22.33■■□□□ 1.17
Gm43854-201ENSMUST00000200418 BicraF8VPZ9 1578 aa22.28■■□□□ 1.16
Gm43854-201ENSMUST00000200418 Thoc2B1AZI6 1594 aaKnown RBP21.88■■□□□ 1.09
Gm43854-201ENSMUST00000200418 Dcaf1Q80TR8 1506 aa21.85■■□□□ 1.09
Gm43854-201ENSMUST00000200418 Pds5bQ4VA53 1446 aaKnown RBP21.61■■□□□ 1.05
Gm43854-201ENSMUST00000200418 Cc2d2aQ8CFW7 1633 aa21.51■■□□□ 1.03
Gm43854-201ENSMUST00000200418 Dnajc5P60904 198 aa21.43■■□□□ 1.02
Gm43854-201ENSMUST00000200418 Rb1cc1Q9ESK9 1588 aa21.33■■□□□ 1.01
Gm43854-201ENSMUST00000200418 Atad2bE9Q166 1460 aaKnown RBP21.27■■□□□ 1
Gm43854-201ENSMUST00000200418 Fam135aQ6NS59 1506 aa21.16■□□□□ 0.98
Gm43854-201ENSMUST00000200418 Ercc6F8VPZ5 1481 aa21.13■□□□□ 0.97
Gm43854-201ENSMUST00000200418 Smarca2Q6DIC0 1577 aa21■□□□□ 0.95
Gm43854-201ENSMUST00000200418 Trim41Q5NCC3 630 aa20.99■□□□□ 0.95
Gm43854-201ENSMUST00000200418 Baz1aO88379 1555 aa20.93■□□□□ 0.94
Gm43854-201ENSMUST00000200418 Crybg2B7ZCC2 1516 aa20.87■□□□□ 0.93
Gm43854-201ENSMUST00000200418 Iqgap2Q3UQ44 1575 aa20.85■□□□□ 0.93
Gm43854-201ENSMUST00000200418 Smarca4Q3TKT4 1613 aaKnown RBP20.82■□□□□ 0.92
Gm43854-201ENSMUST00000200418 Frmpd1A2AKB4 1549 aa20.81■□□□□ 0.92
Gm43854-201ENSMUST00000200418 Wdr62Q3U3T8 1523 aa20.8■□□□□ 0.92
Gm43854-201ENSMUST00000200418 Zcchc6Q5BLK4 1491 aaKnown RBP20.79■□□□□ 0.92
Gm43854-201ENSMUST00000200418 Phldb1Q6PDH0 1371 aaKnown RBP20.76■□□□□ 0.91
Gm43854-201ENSMUST00000200418 Ccdc180J3QNE4 1664 aa20.73■□□□□ 0.91
Gm43854-201ENSMUST00000200418 Ubl4bQ9CQ84 188 aa20.66■□□□□ 0.9
Gm43854-201ENSMUST00000200418 Cecr2E9Q2Z1 1453 aa20.65■□□□□ 0.9
Gm43854-201ENSMUST00000200418 Baz1bQ9Z277 1479 aa20.65■□□□□ 0.9
Gm43854-201ENSMUST00000200418 Mrc2Q64449 1479 aa20.63■□□□□ 0.89
Gm43854-201ENSMUST00000200418 Unc13aQ4KUS2 1712 aa20.61■□□□□ 0.89
Gm43854-201ENSMUST00000200418 Rhox8Q6VSS7 320 aa20.36■□□□□ 0.85
Gm43854-201ENSMUST00000200418 Lrriq1Q0P5X1 1673 aa20.35■□□□□ 0.85
Gm43854-201ENSMUST00000200418 Rsf1E9PWW9 1441 aaKnown RBP20.16■□□□□ 0.82
Gm43854-201ENSMUST00000200418 Shroom2A2ALU4 1481 aa20.16■□□□□ 0.82
Gm43854-201ENSMUST00000200418 Col17a1Q07563 1470 aa20.12■□□□□ 0.81
Gm43854-201ENSMUST00000200418 Kif21aQ9QXL2 1672 aa20.04■□□□□ 0.8
Gm43854-201ENSMUST00000200418 Eif4g3Q80XI3 1579 aaKnown RBP19.99■□□□□ 0.79
Gm43854-201ENSMUST00000200418 Cux2P70298 1426 aa19.92■□□□□ 0.78
Gm43854-201ENSMUST00000200418 CftrP26361 1476 aa19.92■□□□□ 0.78
Gm43854-201ENSMUST00000200418 Cttnbp2B9EJA2 1648 aa19.89■□□□□ 0.77
Gm43854-201ENSMUST00000200418 Synj1Q8CHC4 1574 aa19.86■□□□□ 0.77
Gm43854-201ENSMUST00000200418 Pabpn1Q8CCS6 302 aaKnown RBP19.79■□□□□ 0.76
Gm43854-201ENSMUST00000200418 Top2bQ64511 1612 aa19.79■□□□□ 0.76
Gm43854-201ENSMUST00000200418 Pcdh10E9PXQ7 1057 aa19.75■□□□□ 0.75
Gm43854-201ENSMUST00000200418 Kif15Q6P9L6 1387 aa19.72■□□□□ 0.75
Gm43854-201ENSMUST00000200418 Urb2E9Q7L1 1524 aaKnown RBP19.66■□□□□ 0.74
Gm43854-201ENSMUST00000200418 Pelp1Q9DBD5 1123 aaKnown RBP19.62■□□□□ 0.73
Gm43854-201ENSMUST00000200418 Zcchc11B2RX14 1644 aaKnown RBP19.59■□□□□ 0.73
Gm43854-201ENSMUST00000200418 Plb1Q3TTY0 1478 aa19.58■□□□□ 0.72
Gm43854-201ENSMUST00000200418 Npm1Q61937 292 aaKnown RBP19.56■□□□□ 0.72
Gm43854-201ENSMUST00000200418 Lamc3Q9R0B6 1581 aa19.52■□□□□ 0.71
Gm43854-201ENSMUST00000200418 Brd4Q9ESU6 1400 aaKnown RBP19.51■□□□□ 0.71
Gm43854-201ENSMUST00000200418 Arhgef5E9Q7D5 1581 aa19.45■□□□□ 0.7
Gm43854-201ENSMUST00000200418 Cep164Q5DU05 1446 aa19.44■□□□□ 0.7
Gm43854-201ENSMUST00000200418 Esf1Q3V1V3 845 aaKnown RBP19.43■□□□□ 0.7
Gm43854-201ENSMUST00000200418 Dhx29Q6PGC1 1365 aaKnown RBP19.43■□□□□ 0.7
Gm43854-201ENSMUST00000200418 Rusc2Q80U22 1514 aa19.41■□□□□ 0.7
Gm43854-201ENSMUST00000200418 Crocc2F6XLV1 1638 aa19.34■□□□□ 0.69
Gm43854-201ENSMUST00000200418 Adgrl3Q80TS3 1537 aa19.3■□□□□ 0.68
Gm43854-201ENSMUST00000200418 Ccdc136Q3TVA9 1136 aa19.28■□□□□ 0.68
Gm43854-201ENSMUST00000200418 Il27Q8K3I6 234 aa19.26■□□□□ 0.67
Gm43854-201ENSMUST00000200418 Ttbk1Q6PCN3 1308 aa19.25■□□□□ 0.67
Gm43854-201ENSMUST00000200418 Ift140E9PY46 1464 aa19.23■□□□□ 0.67
Gm43854-201ENSMUST00000200418 LrpprcQ6PB66 1392 aaKnown RBP19.22■□□□□ 0.67
Gm43854-201ENSMUST00000200418 Rtl1Q7M732 1744 aa19.2■□□□□ 0.66
Gm43854-201ENSMUST00000200418 PtprtQ99M80 1454 aa19.18■□□□□ 0.66
Gm43854-201ENSMUST00000200418 Setd1bQ8CFT2 1985 aa19.17■□□□□ 0.66
Gm43854-201ENSMUST00000200418 Cep170Q6A065 1588 aa19.16■□□□□ 0.66
Gm43854-201ENSMUST00000200418 Gm156Q58A37 223 aa19.15■□□□□ 0.66
Gm43854-201ENSMUST00000200418 PtprkP35822 1457 aa19.14■□□□□ 0.65
Gm43854-201ENSMUST00000200418 Ccdc18Q640L5 1455 aa19.12■□□□□ 0.65
Gm43854-201ENSMUST00000200418 Camsap1A2AHC3 1581 aa19.09■□□□□ 0.65
Gm43854-201ENSMUST00000200418 Disp1Q3TDN0 1521 aa19.09■□□□□ 0.65
Gm43854-201ENSMUST00000200418 TnnQ80Z71 1560 aa19.08■□□□□ 0.65
Gm43854-201ENSMUST00000200418 Gapvd1Q6PAR5 1458 aa19.06■□□□□ 0.64
Gm43854-201ENSMUST00000200418 PogzQ8BZH4 1409 aaKnown RBP19.06■□□□□ 0.64
Gm43854-201ENSMUST00000200418 Pprc1Q6NZN1 1644 aa19.04■□□□□ 0.64
Gm43854-201ENSMUST00000200418 Nup160Q9Z0W3 1402 aaKnown RBP18.98■□□□□ 0.63
Gm43854-201ENSMUST00000200418 Duox2A2AQ99 1517 aa18.97■□□□□ 0.63
Gm43854-201ENSMUST00000200418 Golga3P55937 1487 aa18.93■□□□□ 0.62
Gm43854-201ENSMUST00000200418 Cc2d2bA0A286YDU8 1405 aa18.91■□□□□ 0.62
Gm43854-201ENSMUST00000200418 Samd9lQ69Z37 1561 aa18.89■□□□□ 0.61
Gm43854-201ENSMUST00000200418 Pbrm1Q8BSQ9 1634 aaKnown RBP18.89■□□□□ 0.61
Gm43854-201ENSMUST00000200418 Fgd6Q69ZL1 1399 aa18.87■□□□□ 0.61
Gm43854-201ENSMUST00000200418 Rapgef2Q8CHG7 1496 aa18.85■□□□□ 0.61
Gm43854-201ENSMUST00000200418 Plekhg3Q4VAC9 1341 aa18.84■□□□□ 0.61
Gm43854-201ENSMUST00000200418 Ythdc2B2RR83 1445 aaKnown RBP18.83■□□□□ 0.6
Gm43854-201ENSMUST00000200418 Abcc1O35379 1528 aa18.82■□□□□ 0.6
Gm43854-201ENSMUST00000200418 AqrQ8CFQ3 1481 aaKnown RBP18.79■□□□□ 0.6
Gm43854-201ENSMUST00000200418 Rad54l2Q99NG0 1466 aa18.79■□□□□ 0.6
Gm43854-201ENSMUST00000200418 Chd1P40201 1711 aa18.79■□□□□ 0.6
Gm43854-201ENSMUST00000200418 AknaQ80VW7 1404 aa18.77■□□□□ 0.6
Gm43854-201ENSMUST00000200418 Setbp1Q9Z180 1582 aa18.76■□□□□ 0.59
Gm43854-201ENSMUST00000200418 Grin2bQ01097 1482 aa18.73■□□□□ 0.59
Gm43854-201ENSMUST00000200418 Magi3Q9EQJ9 1476 aa18.73■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms