RNA–Protein interactions for RNA: ENSMUST00000194888.1

Pcdhga1-202, mousemouse

APPRIS ALT2 BASIC

Gene Pcdhga1, Length 3,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga1-202ENSMUST00000194888 Gm35339A0A140LHH9 1649 aa18.23■□□□□ 0.51
Pcdhga1-202ENSMUST00000194888 NischQ80TM9 1593 aa17.95■□□□□ 0.46
Pcdhga1-202ENSMUST00000194888 Abcc9P70170 1546 aa17.49■□□□□ 0.39
Pcdhga1-202ENSMUST00000194888 Abcc8B2RUS7 1588 aa17.27■□□□□ 0.36
Pcdhga1-202ENSMUST00000194888 ScribQ80U72 1612 aa16.42■□□□□ 0.22
Pcdhga1-202ENSMUST00000194888 Dcaf1Q80TR8 1506 aa16.15■□□□□ 0.18
Pcdhga1-202ENSMUST00000194888 Kdm5dQ62240 1548 aa15.93■□□□□ 0.14
Pcdhga1-202ENSMUST00000194888 NacadQ5SWP3 1504 aa15.93■□□□□ 0.14
Pcdhga1-202ENSMUST00000194888 Ccdc180J3QNE4 1664 aa15.82■□□□□ 0.12
Pcdhga1-202ENSMUST00000194888 Rb1cc1Q9ESK9 1588 aa15.68■□□□□ 0.1
Pcdhga1-202ENSMUST00000194888 Sycp2Q9CUU3 1500 aa15.6■□□□□ 0.09
Pcdhga1-202ENSMUST00000194888 Rhox8Q6VSS7 320 aa15.57■□□□□ 0.08
Pcdhga1-202ENSMUST00000194888 Baz1aO88379 1555 aa15.54■□□□□ 0.08
Pcdhga1-202ENSMUST00000194888 Crybg2B7ZCC2 1516 aa15.5■□□□□ 0.07
Pcdhga1-202ENSMUST00000194888 Rtl1Q7M732 1744 aa15.4■□□□□ 0.06
Pcdhga1-202ENSMUST00000194888 BicraF8VPZ9 1578 aa15.32■□□□□ 0.04
Pcdhga1-202ENSMUST00000194888 Smarca2Q6DIC0 1577 aa15.15■□□□□ 0.02
Pcdhga1-202ENSMUST00000194888 Zcchc6Q5BLK4 1491 aaKnown RBP15.03■□□□□ -0
Pcdhga1-202ENSMUST00000194888 Smarca4Q3TKT4 1613 aaKnown RBP14.79□□□□□ -0.04
Pcdhga1-202ENSMUST00000194888 Cecr2E9Q2Z1 1453 aa14.78□□□□□ -0.04
Pcdhga1-202ENSMUST00000194888 Pds5bQ4VA53 1446 aaKnown RBP14.74□□□□□ -0.05
Pcdhga1-202ENSMUST00000194888 Atad2bE9Q166 1460 aaKnown RBP14.71□□□□□ -0.05
Pcdhga1-202ENSMUST00000194888 Brd4Q9ESU6 1400 aaKnown RBP14.64□□□□□ -0.07
Pcdhga1-202ENSMUST00000194888 Cttnbp2B9EJA2 1648 aa14.63□□□□□ -0.07
Pcdhga1-202ENSMUST00000194888 Iqgap2Q3UQ44 1575 aa14.63□□□□□ -0.07
Pcdhga1-202ENSMUST00000194888 Synj1Q8CHC4 1574 aa14.6□□□□□ -0.07
Pcdhga1-202ENSMUST00000194888 CftrP26361 1476 aa14.58□□□□□ -0.08
Pcdhga1-202ENSMUST00000194888 Thoc2B1AZI6 1594 aaKnown RBP14.56□□□□□ -0.08
Pcdhga1-202ENSMUST00000194888 Ccdc136Q3TVA9 1136 aa14.51□□□□□ -0.09
Pcdhga1-202ENSMUST00000194888 Trim41Q5NCC3 630 aa14.47□□□□□ -0.09
Pcdhga1-202ENSMUST00000194888 Wdr62Q3U3T8 1523 aa14.46□□□□□ -0.09
Pcdhga1-202ENSMUST00000194888 Ercc6F8VPZ5 1481 aa14.41□□□□□ -0.1
Pcdhga1-202ENSMUST00000194888 Frmpd1A2AKB4 1549 aa14.39□□□□□ -0.11
Pcdhga1-202ENSMUST00000194888 Unc13aQ4KUS2 1712 aa14.35□□□□□ -0.11
Pcdhga1-202ENSMUST00000194888 Top2bQ64511 1612 aa14.35□□□□□ -0.11
Pcdhga1-202ENSMUST00000194888 Fam135aQ6NS59 1506 aa14.3□□□□□ -0.12
Pcdhga1-202ENSMUST00000194888 Golga3P55937 1487 aa14.28□□□□□ -0.12
Pcdhga1-202ENSMUST00000194888 Baz1bQ9Z277 1479 aa14.26□□□□□ -0.13
Pcdhga1-202ENSMUST00000194888 Cc2d2aQ8CFW7 1633 aa14.25□□□□□ -0.13
Pcdhga1-202ENSMUST00000194888 Phldb1Q6PDH0 1371 aaKnown RBP14.18□□□□□ -0.14
Pcdhga1-202ENSMUST00000194888 TnnQ80Z71 1560 aa14.15□□□□□ -0.14
Pcdhga1-202ENSMUST00000194888 Lamc3Q9R0B6 1581 aa14.13□□□□□ -0.15
Pcdhga1-202ENSMUST00000194888 HrcG5E8J6 738 aa14.12□□□□□ -0.15
Pcdhga1-202ENSMUST00000194888 Esf1Q3V1V3 845 aaKnown RBP14.08□□□□□ -0.16
Pcdhga1-202ENSMUST00000194888 Fmn1Q05860 1466 aa14.07□□□□□ -0.16
Pcdhga1-202ENSMUST00000194888 Rsf1E9PWW9 1441 aaKnown RBP14.01□□□□□ -0.17
Pcdhga1-202ENSMUST00000194888 Dnajc5bQ9CQ94 199 aa14□□□□□ -0.17
Pcdhga1-202ENSMUST00000194888 Cngb1E1AZ71 1325 aa13.95□□□□□ -0.18
Pcdhga1-202ENSMUST00000194888 Ccdc88bQ4QRL3 1481 aa13.95□□□□□ -0.18
Pcdhga1-202ENSMUST00000194888 Cep164Q5DU05 1446 aa13.94□□□□□ -0.18
Pcdhga1-202ENSMUST00000194888 Top2aQ01320 1528 aaKnown RBP13.93□□□□□ -0.18
Pcdhga1-202ENSMUST00000194888 Kif15Q6P9L6 1387 aa13.89□□□□□ -0.19
Pcdhga1-202ENSMUST00000194888 Camsap1A2AHC3 1581 aa13.88□□□□□ -0.19
Pcdhga1-202ENSMUST00000194888 Ubl4bQ9CQ84 188 aa13.88□□□□□ -0.19
Pcdhga1-202ENSMUST00000194888 Mrc2Q64449 1479 aa13.87□□□□□ -0.19
Pcdhga1-202ENSMUST00000194888 Cux2P70298 1426 aa13.82□□□□□ -0.2
Pcdhga1-202ENSMUST00000194888 Chic1Q8CBW7 227 aa13.81□□□□□ -0.2
Pcdhga1-202ENSMUST00000194888 Ccdc18Q640L5 1455 aa13.79□□□□□ -0.2
Pcdhga1-202ENSMUST00000194888 Kif21aQ9QXL2 1672 aa13.74□□□□□ -0.21
Pcdhga1-202ENSMUST00000194888 Grin2bQ01097 1482 aa13.71□□□□□ -0.22
Pcdhga1-202ENSMUST00000194888 NrkQ9R0G8 1455 aa13.71□□□□□ -0.22
Pcdhga1-202ENSMUST00000194888 Rapgef2Q8CHG7 1496 aa13.65□□□□□ -0.22
Pcdhga1-202ENSMUST00000194888 Eif4g1Q6NZJ6 1600 aaKnown RBP13.65□□□□□ -0.23
Pcdhga1-202ENSMUST00000194888 LrpprcQ6PB66 1392 aaKnown RBP13.64□□□□□ -0.23
Pcdhga1-202ENSMUST00000194888 PogzQ8BZH4 1409 aaKnown RBP13.64□□□□□ -0.23
Pcdhga1-202ENSMUST00000194888 Shroom4Q1W617 1475 aa13.63□□□□□ -0.23
Pcdhga1-202ENSMUST00000194888 Crocc2F6XLV1 1638 aa13.61□□□□□ -0.23
Pcdhga1-202ENSMUST00000194888 Npm1Q61937 292 aaKnown RBP13.61□□□□□ -0.23
Pcdhga1-202ENSMUST00000194888 Efcab5A0JP43 1406 aa13.59□□□□□ -0.23
Pcdhga1-202ENSMUST00000194888 Lrriq1Q0P5X1 1673 aa13.59□□□□□ -0.23
Pcdhga1-202ENSMUST00000194888 Duox2A2AQ99 1517 aa13.57□□□□□ -0.24
Pcdhga1-202ENSMUST00000194888 Dhx29Q6PGC1 1365 aaKnown RBP13.56□□□□□ -0.24
Pcdhga1-202ENSMUST00000194888 PtprkP35822 1457 aa13.55□□□□□ -0.24
Pcdhga1-202ENSMUST00000194888 Gpatch8A2A6A1 1505 aa13.55□□□□□ -0.24
Pcdhga1-202ENSMUST00000194888 Samd9lQ69Z37 1561 aa13.51□□□□□ -0.25
Pcdhga1-202ENSMUST00000194888 Map3k1P53349 1493 aa13.51□□□□□ -0.25
Pcdhga1-202ENSMUST00000194888 Pbrm1Q8BSQ9 1634 aaKnown RBP13.5□□□□□ -0.25
Pcdhga1-202ENSMUST00000194888 Urb2E9Q7L1 1524 aaKnown RBP13.49□□□□□ -0.25
Pcdhga1-202ENSMUST00000194888 Il27Q8K3I6 234 aa13.48□□□□□ -0.25
Pcdhga1-202ENSMUST00000194888 Cep162Q6ZQ06 1403 aa13.48□□□□□ -0.25
Pcdhga1-202ENSMUST00000194888 Mroh2bQ7M6Y6 1581 aa13.47□□□□□ -0.25
Pcdhga1-202ENSMUST00000194888 Arhgap35Q91YM2 1499 aa13.46□□□□□ -0.25
Pcdhga1-202ENSMUST00000194888 AqrQ8CFQ3 1481 aaKnown RBP13.45□□□□□ -0.26
Pcdhga1-202ENSMUST00000194888 Plb1Q3TTY0 1478 aa13.45□□□□□ -0.26
Pcdhga1-202ENSMUST00000194888 SynmQ70IV5 1561 aa13.45□□□□□ -0.26
Pcdhga1-202ENSMUST00000194888 Setd1bQ8CFT2 1985 aa13.44□□□□□ -0.26
Pcdhga1-202ENSMUST00000194888 Eif4g3Q80XI3 1579 aaKnown RBP13.44□□□□□ -0.26
Pcdhga1-202ENSMUST00000194888 Ift140E9PY46 1464 aa13.43□□□□□ -0.26
Pcdhga1-202ENSMUST00000194888 Gab3Q8BSM5 595 aa13.39□□□□□ -0.27
Pcdhga1-202ENSMUST00000194888 Disp1Q3TDN0 1521 aa13.38□□□□□ -0.27
Pcdhga1-202ENSMUST00000194888 Magi3Q9EQJ9 1476 aa13.37□□□□□ -0.27
Pcdhga1-202ENSMUST00000194888 Nup160Q9Z0W3 1402 aaKnown RBP13.35□□□□□ -0.27
Pcdhga1-202ENSMUST00000194888 Pla2r1Q62028 1487 aa13.32□□□□□ -0.28
Pcdhga1-202ENSMUST00000194888 Grin2aP35436 1464 aa13.32□□□□□ -0.28
Pcdhga1-202ENSMUST00000194888 Rusc2Q80U22 1514 aa13.32□□□□□ -0.28
Pcdhga1-202ENSMUST00000194888 Polr1aO35134 1717 aaKnown RBP13.31□□□□□ -0.28
Pcdhga1-202ENSMUST00000194888 Carmil1Q6EDY6 1374 aa13.31□□□□□ -0.28
Pcdhga1-202ENSMUST00000194888 Rad54l2Q99NG0 1466 aa13.3□□□□□ -0.28
Pcdhga1-202ENSMUST00000194888 Erich3F6QRE9 1637 aa13.3□□□□□ -0.28
Pcdhga1-202ENSMUST00000194888 Npm2Q80W85 207 aa13.3□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 8.4 ms