RNA–Protein interactions for RNA: ENSMUST00000190121.6

Matr3-215, Transcript of Matrin-3, mousemouse

TSL 5 BASIC

Gene Matr3, Length 2,638 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Matr3-215ENSMUST00000190121 Gm35339A0A140LHH9 1649 aa17.37■□□□□ 0.37
Matr3-215ENSMUST00000190121 Chic1Q8CBW7 227 aa16.79■□□□□ 0.28
Matr3-215ENSMUST00000190121 NischQ80TM9 1593 aa16.73■□□□□ 0.27
Matr3-215ENSMUST00000190121 Abcc9P70170 1546 aa16.69■□□□□ 0.26
Matr3-215ENSMUST00000190121 Mapk8ip2Q9ERE9 830 aa16.46■□□□□ 0.22
Matr3-215ENSMUST00000190121 Abcc8B2RUS7 1588 aa16.38■□□□□ 0.21
Matr3-215ENSMUST00000190121 ScribQ80U72 1612 aa16.19■□□□□ 0.18
Matr3-215ENSMUST00000190121 Dnajc5bQ9CQ94 199 aa15.67■□□□□ 0.1
Matr3-215ENSMUST00000190121 NacadQ5SWP3 1504 aa15.64■□□□□ 0.09
Matr3-215ENSMUST00000190121 Kdm5dQ62240 1548 aa15.48■□□□□ 0.07
Matr3-215ENSMUST00000190121 Sycp2Q9CUU3 1500 aa15.35■□□□□ 0.05
Matr3-215ENSMUST00000190121 BicraF8VPZ9 1578 aa15.22■□□□□ 0.03
Matr3-215ENSMUST00000190121 Phf23Q8BSN5 401 aa15.14■□□□□ 0.01
Matr3-215ENSMUST00000190121 Thoc2B1AZI6 1594 aaKnown RBP15.11■□□□□ 0.01
Matr3-215ENSMUST00000190121 Dcaf1Q80TR8 1506 aa15.01□□□□□ -0.01
Matr3-215ENSMUST00000190121 Dnajc5P60904 198 aa15.01□□□□□ -0.01
Matr3-215ENSMUST00000190121 Pds5bQ4VA53 1446 aaKnown RBP14.99□□□□□ -0.01
Matr3-215ENSMUST00000190121 Cc2d2aQ8CFW7 1633 aa14.81□□□□□ -0.04
Matr3-215ENSMUST00000190121 Atad2bE9Q166 1460 aaKnown RBP14.69□□□□□ -0.06
Matr3-215ENSMUST00000190121 Fam135aQ6NS59 1506 aa14.64□□□□□ -0.07
Matr3-215ENSMUST00000190121 Ercc6F8VPZ5 1481 aa14.64□□□□□ -0.07
Matr3-215ENSMUST00000190121 Baz1bQ9Z277 1479 aa14.6□□□□□ -0.07
Matr3-215ENSMUST00000190121 Plppr3Q7TPB0 716 aa14.58□□□□□ -0.08
Matr3-215ENSMUST00000190121 Rb1cc1Q9ESK9 1588 aa14.56□□□□□ -0.08
Matr3-215ENSMUST00000190121 Gab3Q8BSM5 595 aa14.48□□□□□ -0.09
Matr3-215ENSMUST00000190121 Crybg2B7ZCC2 1516 aa14.43□□□□□ -0.1
Matr3-215ENSMUST00000190121 Smarca2Q6DIC0 1577 aa14.43□□□□□ -0.1
Matr3-215ENSMUST00000190121 Trim41Q5NCC3 630 aa14.41□□□□□ -0.1
Matr3-215ENSMUST00000190121 Phldb1Q6PDH0 1371 aaKnown RBP14.37□□□□□ -0.11
Matr3-215ENSMUST00000190121 Ccdc180J3QNE4 1664 aa14.35□□□□□ -0.11
Matr3-215ENSMUST00000190121 Smarca4Q3TKT4 1613 aaKnown RBP14.3□□□□□ -0.12
Matr3-215ENSMUST00000190121 Iqgap2Q3UQ44 1575 aa14.3□□□□□ -0.12
Matr3-215ENSMUST00000190121 Baz1aO88379 1555 aa14.3□□□□□ -0.12
Matr3-215ENSMUST00000190121 Wdr62Q3U3T8 1523 aa14.29□□□□□ -0.12
Matr3-215ENSMUST00000190121 Mrc2Q64449 1479 aa14.26□□□□□ -0.13
Matr3-215ENSMUST00000190121 Frmpd1A2AKB4 1549 aa14.25□□□□□ -0.13
Matr3-215ENSMUST00000190121 Ubl4bQ9CQ84 188 aa14.21□□□□□ -0.13
Matr3-215ENSMUST00000190121 Zcchc6Q5BLK4 1491 aaKnown RBP14.12□□□□□ -0.15
Matr3-215ENSMUST00000190121 Unc13aQ4KUS2 1712 aa14.08□□□□□ -0.16
Matr3-215ENSMUST00000190121 Shroom2A2ALU4 1481 aa14.07□□□□□ -0.16
Matr3-215ENSMUST00000190121 Lrriq1Q0P5X1 1673 aa14.01□□□□□ -0.17
Matr3-215ENSMUST00000190121 Rsf1E9PWW9 1441 aaKnown RBP14□□□□□ -0.17
Matr3-215ENSMUST00000190121 Col17a1Q07563 1470 aa13.97□□□□□ -0.17
Matr3-215ENSMUST00000190121 Cecr2E9Q2Z1 1453 aa13.96□□□□□ -0.18
Matr3-215ENSMUST00000190121 Senp3Q9EP97 568 aaKnown RBP13.85□□□□□ -0.19
Matr3-215ENSMUST00000190121 Eif4g3Q80XI3 1579 aaKnown RBP13.84□□□□□ -0.19
Matr3-215ENSMUST00000190121 Top2bQ64511 1612 aa13.78□□□□□ -0.2
Matr3-215ENSMUST00000190121 Pabpn1Q8CCS6 302 aaKnown RBP13.75□□□□□ -0.21
Matr3-215ENSMUST00000190121 Kif21aQ9QXL2 1672 aa13.72□□□□□ -0.21
Matr3-215ENSMUST00000190121 Zcchc11B2RX14 1644 aaKnown RBP13.72□□□□□ -0.21
Matr3-215ENSMUST00000190121 Rhox8Q6VSS7 320 aa13.65□□□□□ -0.22
Matr3-215ENSMUST00000190121 Cux2P70298 1426 aa13.64□□□□□ -0.23
Matr3-215ENSMUST00000190121 Cttnbp2B9EJA2 1648 aa13.63□□□□□ -0.23
Matr3-215ENSMUST00000190121 Arhgef5E9Q7D5 1581 aa13.56□□□□□ -0.24
Matr3-215ENSMUST00000190121 CftrP26361 1476 aa13.56□□□□□ -0.24
Matr3-215ENSMUST00000190121 Pcdh10E9PXQ7 1057 aa13.55□□□□□ -0.24
Matr3-215ENSMUST00000190121 Pelp1Q9DBD5 1123 aaKnown RBP13.49□□□□□ -0.25
Matr3-215ENSMUST00000190121 Kif15Q6P9L6 1387 aa13.48□□□□□ -0.25
Matr3-215ENSMUST00000190121 Plb1Q3TTY0 1478 aa13.47□□□□□ -0.25
Matr3-215ENSMUST00000190121 Urb2E9Q7L1 1524 aaKnown RBP13.46□□□□□ -0.25
Matr3-215ENSMUST00000190121 Npm1Q61937 292 aaKnown RBP13.46□□□□□ -0.25
Matr3-215ENSMUST00000190121 Synj1Q8CHC4 1574 aa13.46□□□□□ -0.26
Matr3-215ENSMUST00000190121 Cep164Q5DU05 1446 aa13.41□□□□□ -0.26
Matr3-215ENSMUST00000190121 Rusc2Q80U22 1514 aa13.38□□□□□ -0.27
Matr3-215ENSMUST00000190121 Lamc3Q9R0B6 1581 aa13.38□□□□□ -0.27
Matr3-215ENSMUST00000190121 Brd4Q9ESU6 1400 aaKnown RBP13.37□□□□□ -0.27
Matr3-215ENSMUST00000190121 Adgrl3Q80TS3 1537 aa13.37□□□□□ -0.27
Matr3-215ENSMUST00000190121 Ttbk1Q6PCN3 1308 aa13.33□□□□□ -0.28
Matr3-215ENSMUST00000190121 Kcna4Q61423 654 aa13.32□□□□□ -0.28
Matr3-215ENSMUST00000190121 Ift140E9PY46 1464 aa13.31□□□□□ -0.28
Matr3-215ENSMUST00000190121 Dhx29Q6PGC1 1365 aaKnown RBP13.3□□□□□ -0.28
Matr3-215ENSMUST00000190121 Crocc2F6XLV1 1638 aa13.28□□□□□ -0.28
Matr3-215ENSMUST00000190121 PtprtQ99M80 1454 aa13.26□□□□□ -0.29
Matr3-215ENSMUST00000190121 PtprkP35822 1457 aa13.25□□□□□ -0.29
Matr3-215ENSMUST00000190121 Esf1Q3V1V3 845 aaKnown RBP13.23□□□□□ -0.29
Matr3-215ENSMUST00000190121 Cep170Q6A065 1588 aa13.22□□□□□ -0.29
Matr3-215ENSMUST00000190121 Gm156Q58A37 223 aa13.19□□□□□ -0.3
Matr3-215ENSMUST00000190121 LrpprcQ6PB66 1392 aaKnown RBP13.18□□□□□ -0.3
Matr3-215ENSMUST00000190121 Ccdc18Q640L5 1455 aa13.18□□□□□ -0.3
Matr3-215ENSMUST00000190121 Plekhg3Q4VAC9 1341 aa13.16□□□□□ -0.3
Matr3-215ENSMUST00000190121 Gapvd1Q6PAR5 1458 aa13.15□□□□□ -0.3
Matr3-215ENSMUST00000190121 Pbrm1Q8BSQ9 1634 aaKnown RBP13.11□□□□□ -0.31
Matr3-215ENSMUST00000190121 Cc2d2bA0A286YDU8 1405 aa13.09□□□□□ -0.31
Matr3-215ENSMUST00000190121 Pprc1Q6NZN1 1644 aa13.09□□□□□ -0.31
Matr3-215ENSMUST00000190121 Rtl1Q7M732 1744 aa13.08□□□□□ -0.32
Matr3-215ENSMUST00000190121 Setd1bQ8CFT2 1985 aa13.06□□□□□ -0.32
Matr3-215ENSMUST00000190121 PogzQ8BZH4 1409 aaKnown RBP13.06□□□□□ -0.32
Matr3-215ENSMUST00000190121 Golga3P55937 1487 aa13.05□□□□□ -0.32
Matr3-215ENSMUST00000190121 Disp1Q3TDN0 1521 aa13.05□□□□□ -0.32
Matr3-215ENSMUST00000190121 Fgd6Q69ZL1 1399 aa13.04□□□□□ -0.32
Matr3-215ENSMUST00000190121 Nup160Q9Z0W3 1402 aaKnown RBP13.03□□□□□ -0.32
Matr3-215ENSMUST00000190121 Il27Q8K3I6 234 aa13.03□□□□□ -0.32
Matr3-215ENSMUST00000190121 Camsap1A2AHC3 1581 aa13.03□□□□□ -0.32
Matr3-215ENSMUST00000190121 TnnQ80Z71 1560 aa13.02□□□□□ -0.32
Matr3-215ENSMUST00000190121 Rapgef2Q8CHG7 1496 aa12.97□□□□□ -0.33
Matr3-215ENSMUST00000190121 Duox2A2AQ99 1517 aa12.97□□□□□ -0.33
Matr3-215ENSMUST00000190121 Setbp1Q9Z180 1582 aa12.96□□□□□ -0.33
Matr3-215ENSMUST00000190121 Abcc1O35379 1528 aa12.94□□□□□ -0.34
Matr3-215ENSMUST00000190121 AqrQ8CFQ3 1481 aaKnown RBP12.94□□□□□ -0.34
Matr3-215ENSMUST00000190121 Ythdc2B2RR83 1445 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 68.3 ms