RNA–Protein interactions for RNA: ENSMUST00000187424.1

Msh3-205, Transcript of DNA mismatch repair protein Msh3, mousemouse

TSL 2 BASIC

Gene Msh3, Length 666 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-205ENSMUST00000187424 Gm35339A0A140LHH9 1649 aa36.96■■■■□ 3.51
Msh3-205ENSMUST00000187424 NischQ80TM9 1593 aa35.92■■■■□ 3.34
Msh3-205ENSMUST00000187424 Abcc8B2RUS7 1588 aa35.04■■■■□ 3.2
Msh3-205ENSMUST00000187424 Abcc9P70170 1546 aa34.83■■■■□ 3.17
Msh3-205ENSMUST00000187424 ScribQ80U72 1612 aa34.34■■■■□ 3.09
Msh3-205ENSMUST00000187424 NacadQ5SWP3 1504 aa32.94■■■□□ 2.86
Msh3-205ENSMUST00000187424 Kdm5dQ62240 1548 aa32.9■■■□□ 2.86
Msh3-205ENSMUST00000187424 Sycp2Q9CUU3 1500 aa32.4■■■□□ 2.78
Msh3-205ENSMUST00000187424 Dnajc5bQ9CQ94 199 aa32.21■■■□□ 2.75
Msh3-205ENSMUST00000187424 BicraF8VPZ9 1578 aa32.18■■■□□ 2.74
Msh3-205ENSMUST00000187424 Dcaf1Q80TR8 1506 aa32.16■■■□□ 2.74
Msh3-205ENSMUST00000187424 Thoc2B1AZI6 1594 aaKnown RBP31.43■■■□□ 2.62
Msh3-205ENSMUST00000187424 Rb1cc1Q9ESK9 1588 aa31.25■■■□□ 2.59
Msh3-205ENSMUST00000187424 Pds5bQ4VA53 1446 aaKnown RBP31.17■■■□□ 2.58
Msh3-205ENSMUST00000187424 Atad2bE9Q166 1460 aaKnown RBP30.8■■■□□ 2.52
Msh3-205ENSMUST00000187424 Crybg2B7ZCC2 1516 aa30.79■■■□□ 2.52
Msh3-205ENSMUST00000187424 Rhox8Q6VSS7 320 aa30.78■■■□□ 2.52
Msh3-205ENSMUST00000187424 Ccdc180J3QNE4 1664 aa30.78■■■□□ 2.52
Msh3-205ENSMUST00000187424 Baz1aO88379 1555 aa30.77■■■□□ 2.52
Msh3-205ENSMUST00000187424 Cc2d2aQ8CFW7 1633 aa30.76■■■□□ 2.51
Msh3-205ENSMUST00000187424 Fam135aQ6NS59 1506 aa30.52■■■□□ 2.48
Msh3-205ENSMUST00000187424 Ercc6F8VPZ5 1481 aa30.43■■■□□ 2.46
Msh3-205ENSMUST00000187424 Smarca2Q6DIC0 1577 aa30.41■■■□□ 2.46
Msh3-205ENSMUST00000187424 Smarca4Q3TKT4 1613 aaKnown RBP30.29■■■□□ 2.44
Msh3-205ENSMUST00000187424 Zcchc6Q5BLK4 1491 aaKnown RBP30.25■■■□□ 2.43
Msh3-205ENSMUST00000187424 Iqgap2Q3UQ44 1575 aa30.24■■■□□ 2.43
Msh3-205ENSMUST00000187424 Wdr62Q3U3T8 1523 aa30.14■■■□□ 2.42
Msh3-205ENSMUST00000187424 Baz1bQ9Z277 1479 aa30.08■■■□□ 2.41
Msh3-205ENSMUST00000187424 Frmpd1A2AKB4 1549 aa30.07■■■□□ 2.4
Msh3-205ENSMUST00000187424 Cecr2E9Q2Z1 1453 aa30.03■■■□□ 2.4
Msh3-205ENSMUST00000187424 Phldb1Q6PDH0 1371 aaKnown RBP29.94■■■□□ 2.38
Msh3-205ENSMUST00000187424 Unc13aQ4KUS2 1712 aa29.78■■■□□ 2.36
Msh3-205ENSMUST00000187424 Dnajc5P60904 198 aa29.75■■■□□ 2.35
Msh3-205ENSMUST00000187424 Mrc2Q64449 1479 aa29.66■■■□□ 2.34
Msh3-205ENSMUST00000187424 Ubl4bQ9CQ84 188 aa29.52■■■□□ 2.32
Msh3-205ENSMUST00000187424 Rtl1Q7M732 1744 aa29.39■■■□□ 2.3
Msh3-205ENSMUST00000187424 CftrP26361 1476 aa29.19■■■□□ 2.26
Msh3-205ENSMUST00000187424 Cttnbp2B9EJA2 1648 aa29.17■■■□□ 2.26
Msh3-205ENSMUST00000187424 Trim41Q5NCC3 630 aa29.17■■■□□ 2.26
Msh3-205ENSMUST00000187424 Lrriq1Q0P5X1 1673 aa29.15■■■□□ 2.26
Msh3-205ENSMUST00000187424 Synj1Q8CHC4 1574 aa29.06■■■□□ 2.24
Msh3-205ENSMUST00000187424 Rsf1E9PWW9 1441 aaKnown RBP28.94■■■□□ 2.22
Msh3-205ENSMUST00000187424 Kif21aQ9QXL2 1672 aa28.85■■■□□ 2.21
Msh3-205ENSMUST00000187424 Ccdc136Q3TVA9 1136 aa28.8■■■□□ 2.2
Msh3-205ENSMUST00000187424 Shroom2A2ALU4 1481 aa28.78■■■□□ 2.2
Msh3-205ENSMUST00000187424 Brd4Q9ESU6 1400 aaKnown RBP28.77■■■□□ 2.2
Msh3-205ENSMUST00000187424 Cux2P70298 1426 aa28.77■■■□□ 2.2
Msh3-205ENSMUST00000187424 Eif4g3Q80XI3 1579 aaKnown RBP28.72■■■□□ 2.19
Msh3-205ENSMUST00000187424 Kif15Q6P9L6 1387 aa28.56■■■□□ 2.16
Msh3-205ENSMUST00000187424 Lamc3Q9R0B6 1581 aa28.53■■■□□ 2.16
Msh3-205ENSMUST00000187424 Col17a1Q07563 1470 aa28.53■■■□□ 2.16
Msh3-205ENSMUST00000187424 Urb2E9Q7L1 1524 aaKnown RBP28.35■■■□□ 2.13
Msh3-205ENSMUST00000187424 Esf1Q3V1V3 845 aaKnown RBP28.21■■■□□ 2.11
Msh3-205ENSMUST00000187424 Top2bQ64511 1612 aa28.21■■■□□ 2.11
Msh3-205ENSMUST00000187424 Plb1Q3TTY0 1478 aa28.21■■■□□ 2.11
Msh3-205ENSMUST00000187424 Cep164Q5DU05 1446 aa28.18■■■□□ 2.1
Msh3-205ENSMUST00000187424 Npm1Q61937 292 aaKnown RBP28.17■■■□□ 2.1
Msh3-205ENSMUST00000187424 Dhx29Q6PGC1 1365 aaKnown RBP28.11■■■□□ 2.09
Msh3-205ENSMUST00000187424 TnnQ80Z71 1560 aa28.07■■■□□ 2.08
Msh3-205ENSMUST00000187424 Pabpn1Q8CCS6 302 aaKnown RBP28.07■■■□□ 2.08
Msh3-205ENSMUST00000187424 Zcchc11B2RX14 1644 aaKnown RBP28.04■■■□□ 2.08
Msh3-205ENSMUST00000187424 Rusc2Q80U22 1514 aa28.04■■■□□ 2.08
Msh3-205ENSMUST00000187424 Crocc2F6XLV1 1638 aa28.03■■■□□ 2.08
Msh3-205ENSMUST00000187424 LrpprcQ6PB66 1392 aaKnown RBP27.95■■■□□ 2.06
Msh3-205ENSMUST00000187424 Camsap1A2AHC3 1581 aa27.92■■■□□ 2.06
Msh3-205ENSMUST00000187424 Golga3P55937 1487 aa27.9■■■□□ 2.06
Msh3-205ENSMUST00000187424 Ift140E9PY46 1464 aa27.89■■■□□ 2.06
Msh3-205ENSMUST00000187424 Ccdc18Q640L5 1455 aa27.89■■■□□ 2.05
Msh3-205ENSMUST00000187424 PogzQ8BZH4 1409 aaKnown RBP27.78■■■□□ 2.04
Msh3-205ENSMUST00000187424 Setd1bQ8CFT2 1985 aa27.74■■■□□ 2.03
Msh3-205ENSMUST00000187424 Cngb1E1AZ71 1325 aa27.69■■■□□ 2.02
Msh3-205ENSMUST00000187424 Pelp1Q9DBD5 1123 aaKnown RBP27.68■■■□□ 2.02
Msh3-205ENSMUST00000187424 Disp1Q3TDN0 1521 aa27.67■■■□□ 2.02
Msh3-205ENSMUST00000187424 Il27Q8K3I6 234 aa27.66■■■□□ 2.02
Msh3-205ENSMUST00000187424 Duox2A2AQ99 1517 aa27.61■■■□□ 2.01
Msh3-205ENSMUST00000187424 Pcdh10E9PXQ7 1057 aa27.6■■■□□ 2.01
Msh3-205ENSMUST00000187424 Nup160Q9Z0W3 1402 aaKnown RBP27.59■■■□□ 2.01
Msh3-205ENSMUST00000187424 Arhgef5E9Q7D5 1581 aa27.59■■■□□ 2.01
Msh3-205ENSMUST00000187424 Pbrm1Q8BSQ9 1634 aaKnown RBP27.54■■■□□ 2
Msh3-205ENSMUST00000187424 Adgrl3Q80TS3 1537 aa27.53■■■□□ 2
Msh3-205ENSMUST00000187424 Fmn1Q05860 1466 aa27.53■■■□□ 2
Msh3-205ENSMUST00000187424 Samd9lQ69Z37 1561 aa27.51■■□□□ 1.99
Msh3-205ENSMUST00000187424 Cc2d2bA0A286YDU8 1405 aa27.48■■□□□ 1.99
Msh3-205ENSMUST00000187424 Cep170Q6A065 1588 aa27.44■■□□□ 1.98
Msh3-205ENSMUST00000187424 Grin2bQ01097 1482 aa27.43■■□□□ 1.98
Msh3-205ENSMUST00000187424 PtprkP35822 1457 aa27.36■■□□□ 1.97
Msh3-205ENSMUST00000187424 PtprtQ99M80 1454 aa27.36■■□□□ 1.97
Msh3-205ENSMUST00000187424 Gapvd1Q6PAR5 1458 aa27.33■■□□□ 1.97
Msh3-205ENSMUST00000187424 Gm156Q58A37 223 aa27.29■■□□□ 1.96
Msh3-205ENSMUST00000187424 AqrQ8CFQ3 1481 aaKnown RBP27.29■■□□□ 1.96
Msh3-205ENSMUST00000187424 Magi3Q9EQJ9 1476 aa27.28■■□□□ 1.96
Msh3-205ENSMUST00000187424 Ccdc88bQ4QRL3 1481 aa27.27■■□□□ 1.96
Msh3-205ENSMUST00000187424 Pprc1Q6NZN1 1644 aa27.26■■□□□ 1.95
Msh3-205ENSMUST00000187424 Gpatch8A2A6A1 1505 aa27.26■■□□□ 1.95
Msh3-205ENSMUST00000187424 Fgd6Q69ZL1 1399 aa27.25■■□□□ 1.95
Msh3-205ENSMUST00000187424 Grin2aP35436 1464 aa27.24■■□□□ 1.95
Msh3-205ENSMUST00000187424 Efcab5A0JP43 1406 aa27.24■■□□□ 1.95
Msh3-205ENSMUST00000187424 Rad54l2Q99NG0 1466 aa27.19■■□□□ 1.94
Msh3-205ENSMUST00000187424 Abcc1O35379 1528 aa27.11■■□□□ 1.93
Msh3-205ENSMUST00000187424 Top2aQ01320 1528 aaKnown RBP27.09■■□□□ 1.93
Retrieved 100 of 22,080 RNA–protein pairs in 804.1 ms