RNA–Protein interactions for RNA: ENSMUST00000173354.7

Rxrb-203, Transcript of Retinoic acid receptor RXR-beta, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Rxrb, Length 1,743 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rxrb-203ENSMUST00000173354 Gm35339A0A140LHH9 1649 aa44.97■■■■■ 4.79
Rxrb-203ENSMUST00000173354 NischQ80TM9 1593 aa44.63■■■■■ 4.74
Rxrb-203ENSMUST00000173354 Abcc9P70170 1546 aa43.2■■■■■ 4.51
Rxrb-203ENSMUST00000173354 Abcc8B2RUS7 1588 aa43.05■■■■■ 4.48
Rxrb-203ENSMUST00000173354 ScribQ80U72 1612 aa41.31■■■■■ 4.2
Rxrb-203ENSMUST00000173354 Kdm5dQ62240 1548 aa40.05■■■■■ 4
Rxrb-203ENSMUST00000173354 NacadQ5SWP3 1504 aa40.03■■■■■ 4
Rxrb-203ENSMUST00000173354 Dcaf1Q80TR8 1506 aa39.62■■■■□ 3.93
Rxrb-203ENSMUST00000173354 Sycp2Q9CUU3 1500 aa39.25■■■■□ 3.87
Rxrb-203ENSMUST00000173354 Rhox8Q6VSS7 320 aa39.03■■■■□ 3.84
Rxrb-203ENSMUST00000173354 Rb1cc1Q9ESK9 1588 aa38.92■■■■□ 3.82
Rxrb-203ENSMUST00000173354 BicraF8VPZ9 1578 aa38.68■■■■□ 3.78
Rxrb-203ENSMUST00000173354 Baz1aO88379 1555 aa38.38■■■■□ 3.73
Rxrb-203ENSMUST00000173354 Ccdc180J3QNE4 1664 aa38.28■■■■□ 3.72
Rxrb-203ENSMUST00000173354 Crybg2B7ZCC2 1516 aa38.13■■■■□ 3.69
Rxrb-203ENSMUST00000173354 Zcchc6Q5BLK4 1491 aaKnown RBP37.85■■■■□ 3.65
Rxrb-203ENSMUST00000173354 Pds5bQ4VA53 1446 aaKnown RBP37.49■■■■□ 3.59
Rxrb-203ENSMUST00000173354 Smarca2Q6DIC0 1577 aa37.28■■■■□ 3.56
Rxrb-203ENSMUST00000173354 Dnajc5bQ9CQ94 199 aa37.26■■■■□ 3.56
Rxrb-203ENSMUST00000173354 Atad2bE9Q166 1460 aaKnown RBP37.21■■■■□ 3.55
Rxrb-203ENSMUST00000173354 Cecr2E9Q2Z1 1453 aa37.14■■■■□ 3.54
Rxrb-203ENSMUST00000173354 Thoc2B1AZI6 1594 aaKnown RBP37.03■■■■□ 3.52
Rxrb-203ENSMUST00000173354 Smarca4Q3TKT4 1613 aaKnown RBP37.03■■■■□ 3.52
Rxrb-203ENSMUST00000173354 Rtl1Q7M732 1744 aa36.92■■■■□ 3.5
Rxrb-203ENSMUST00000173354 Iqgap2Q3UQ44 1575 aa36.8■■■■□ 3.48
Rxrb-203ENSMUST00000173354 Ercc6F8VPZ5 1481 aa36.71■■■■□ 3.47
Rxrb-203ENSMUST00000173354 Ccdc136Q3TVA9 1136 aa36.51■■■■□ 3.44
Rxrb-203ENSMUST00000173354 Cc2d2aQ8CFW7 1633 aa36.51■■■■□ 3.43
Rxrb-203ENSMUST00000173354 Wdr62Q3U3T8 1523 aa36.43■■■■□ 3.42
Rxrb-203ENSMUST00000173354 Frmpd1A2AKB4 1549 aa36.42■■■■□ 3.42
Rxrb-203ENSMUST00000173354 CftrP26361 1476 aa36.3■■■■□ 3.4
Rxrb-203ENSMUST00000173354 Synj1Q8CHC4 1574 aa36.27■■■■□ 3.4
Rxrb-203ENSMUST00000173354 Brd4Q9ESU6 1400 aaKnown RBP36.27■■■■□ 3.4
Rxrb-203ENSMUST00000173354 Fam135aQ6NS59 1506 aa36.26■■■■□ 3.39
Rxrb-203ENSMUST00000173354 Cttnbp2B9EJA2 1648 aa36.19■■■■□ 3.38
Rxrb-203ENSMUST00000173354 Phldb1Q6PDH0 1371 aaKnown RBP36.12■■■■□ 3.37
Rxrb-203ENSMUST00000173354 Unc13aQ4KUS2 1712 aa35.9■■■■□ 3.34
Rxrb-203ENSMUST00000173354 Trim41Q5NCC3 630 aa35.86■■■■□ 3.33
Rxrb-203ENSMUST00000173354 Ubl4bQ9CQ84 188 aa35.86■■■■□ 3.33
Rxrb-203ENSMUST00000173354 Esf1Q3V1V3 845 aaKnown RBP35.77■■■■□ 3.32
Rxrb-203ENSMUST00000173354 Baz1bQ9Z277 1479 aa35.71■■■■□ 3.31
Rxrb-203ENSMUST00000173354 Mrc2Q64449 1479 aa35.45■■■■□ 3.26
Rxrb-203ENSMUST00000173354 Rsf1E9PWW9 1441 aaKnown RBP35.31■■■■□ 3.24
Rxrb-203ENSMUST00000173354 Kif15Q6P9L6 1387 aa35.26■■■■□ 3.24
Rxrb-203ENSMUST00000173354 Cux2P70298 1426 aa35.15■■■■□ 3.22
Rxrb-203ENSMUST00000173354 Golga3P55937 1487 aa35.14■■■■□ 3.22
Rxrb-203ENSMUST00000173354 Lamc3Q9R0B6 1581 aa35.13■■■■□ 3.21
Rxrb-203ENSMUST00000173354 Cngb1E1AZ71 1325 aa35.11■■■■□ 3.21
Rxrb-203ENSMUST00000173354 Top2bQ64511 1612 aa35.03■■■■□ 3.2
Rxrb-203ENSMUST00000173354 Npm1Q61937 292 aaKnown RBP34.83■■■■□ 3.17
Rxrb-203ENSMUST00000173354 TnnQ80Z71 1560 aa34.82■■■■□ 3.16
Rxrb-203ENSMUST00000173354 Kif21aQ9QXL2 1672 aa34.78■■■■□ 3.16
Rxrb-203ENSMUST00000173354 Il27Q8K3I6 234 aa34.68■■■■□ 3.14
Rxrb-203ENSMUST00000173354 Cep164Q5DU05 1446 aa34.67■■■■□ 3.14
Rxrb-203ENSMUST00000173354 Lrriq1Q0P5X1 1673 aa34.66■■■■□ 3.14
Rxrb-203ENSMUST00000173354 Fmn1Q05860 1466 aa34.65■■■■□ 3.14
Rxrb-203ENSMUST00000173354 Ccdc18Q640L5 1455 aa34.62■■■■□ 3.13
Rxrb-203ENSMUST00000173354 Camsap1A2AHC3 1581 aa34.55■■■■□ 3.12
Rxrb-203ENSMUST00000173354 Dhx29Q6PGC1 1365 aaKnown RBP34.43■■■■□ 3.1
Rxrb-203ENSMUST00000173354 LrpprcQ6PB66 1392 aaKnown RBP34.43■■■■□ 3.1
Rxrb-203ENSMUST00000173354 Ccdc88bQ4QRL3 1481 aa34.35■■■■□ 3.09
Rxrb-203ENSMUST00000173354 Urb2E9Q7L1 1524 aaKnown RBP34.27■■■■□ 3.08
Rxrb-203ENSMUST00000173354 Plb1Q3TTY0 1478 aa34.26■■■■□ 3.07
Rxrb-203ENSMUST00000173354 PogzQ8BZH4 1409 aaKnown RBP34.23■■■■□ 3.07
Rxrb-203ENSMUST00000173354 Crocc2F6XLV1 1638 aa34.23■■■■□ 3.07
Rxrb-203ENSMUST00000173354 Chic1Q8CBW7 227 aa34.21■■■■□ 3.07
Rxrb-203ENSMUST00000173354 Grin2bQ01097 1482 aa34.14■■■■□ 3.06
Rxrb-203ENSMUST00000173354 Eif4g3Q80XI3 1579 aaKnown RBP34.13■■■■□ 3.05
Rxrb-203ENSMUST00000173354 Duox2A2AQ99 1517 aa34.1■■■■□ 3.05
Rxrb-203ENSMUST00000173354 Top2aQ01320 1528 aaKnown RBP34.07■■■■□ 3.04
Rxrb-203ENSMUST00000173354 Ift140E9PY46 1464 aa33.91■■■■□ 3.02
Rxrb-203ENSMUST00000173354 Efcab5A0JP43 1406 aa33.87■■■■□ 3.01
Rxrb-203ENSMUST00000173354 Samd9lQ69Z37 1561 aa33.83■■■■□ 3.01
Rxrb-203ENSMUST00000173354 NrkQ9R0G8 1455 aa33.82■■■■□ 3
Rxrb-203ENSMUST00000173354 Disp1Q3TDN0 1521 aa33.78■■■■□ 3
Rxrb-203ENSMUST00000173354 PtprkP35822 1457 aa33.74■■■□□ 2.99
Rxrb-203ENSMUST00000173354 HrcG5E8J6 738 aa33.73■■■□□ 2.99
Rxrb-203ENSMUST00000173354 Rusc2Q80U22 1514 aa33.72■■■□□ 2.99
Rxrb-203ENSMUST00000173354 Shroom4Q1W617 1475 aa33.69■■■□□ 2.98
Rxrb-203ENSMUST00000173354 Rad54l2Q99NG0 1466 aa33.65■■■□□ 2.98
Rxrb-203ENSMUST00000173354 Nup160Q9Z0W3 1402 aaKnown RBP33.58■■■□□ 2.97
Rxrb-203ENSMUST00000173354 Setd1bQ8CFT2 1985 aa33.55■■■□□ 2.96
Rxrb-203ENSMUST00000173354 Pbrm1Q8BSQ9 1634 aaKnown RBP33.53■■■□□ 2.96
Rxrb-203ENSMUST00000173354 Shroom2A2ALU4 1481 aa33.5■■■□□ 2.95
Rxrb-203ENSMUST00000173354 Magi3Q9EQJ9 1476 aa33.5■■■□□ 2.95
Rxrb-203ENSMUST00000173354 Cc2d2bA0A286YDU8 1405 aa33.5■■■□□ 2.95
Rxrb-203ENSMUST00000173354 Grin2aP35436 1464 aa33.49■■■□□ 2.95
Rxrb-203ENSMUST00000173354 Gab3Q8BSM5 595 aa33.45■■■□□ 2.95
Rxrb-203ENSMUST00000173354 Zeb1Q64318 1117 aa33.44■■■□□ 2.94
Rxrb-203ENSMUST00000173354 Npm2Q80W85 207 aa33.44■■■□□ 2.94
Rxrb-203ENSMUST00000173354 SynmQ70IV5 1561 aa33.41■■■□□ 2.94
Rxrb-203ENSMUST00000173354 Pla2r1Q62028 1487 aa33.34■■■□□ 2.93
Rxrb-203ENSMUST00000173354 Pabpn1Q8CCS6 302 aaKnown RBP33.33■■■□□ 2.93
Rxrb-203ENSMUST00000173354 AqrQ8CFQ3 1481 aaKnown RBP33.3■■■□□ 2.92
Rxrb-203ENSMUST00000173354 Dnajc5P60904 198 aa33.27■■■□□ 2.92
Rxrb-203ENSMUST00000173354 Mroh2bQ7M6Y6 1581 aa33.27■■■□□ 2.92
Rxrb-203ENSMUST00000173354 Rapgef2Q8CHG7 1496 aa33.26■■■□□ 2.92
Rxrb-203ENSMUST00000173354 Pelp1Q9DBD5 1123 aaKnown RBP33.24■■■□□ 2.91
Rxrb-203ENSMUST00000173354 Gpatch8A2A6A1 1505 aa33.17■■■□□ 2.9
Rxrb-203ENSMUST00000173354 Fgd6Q69ZL1 1399 aa33.11■■■□□ 2.89
Retrieved 100 of 22,080 RNA–protein pairs in 38.1 ms