RNA–Protein interactions for RNA: ENSMUST00000171416.1

R3hdm4-202, Transcript of R3H domain-containing protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene R3hdm4, Length 1,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4-202ENSMUST00000171416 Gm35339A0A140LHH9 1649 aa34.33■■■■□ 3.09
R3hdm4-202ENSMUST00000171416 NischQ80TM9 1593 aa33.97■■■■□ 3.03
R3hdm4-202ENSMUST00000171416 Abcc9P70170 1546 aa32.94■■■□□ 2.86
R3hdm4-202ENSMUST00000171416 Abcc8B2RUS7 1588 aa32.75■■■□□ 2.83
R3hdm4-202ENSMUST00000171416 ScribQ80U72 1612 aa31.37■■■□□ 2.61
R3hdm4-202ENSMUST00000171416 NacadQ5SWP3 1504 aa30.44■■■□□ 2.46
R3hdm4-202ENSMUST00000171416 Kdm5dQ62240 1548 aa30.41■■■□□ 2.46
R3hdm4-202ENSMUST00000171416 Dcaf1Q80TR8 1506 aa30.32■■■□□ 2.44
R3hdm4-202ENSMUST00000171416 Sycp2Q9CUU3 1500 aa29.83■■■□□ 2.37
R3hdm4-202ENSMUST00000171416 Rb1cc1Q9ESK9 1588 aa29.64■■■□□ 2.34
R3hdm4-202ENSMUST00000171416 Rhox8Q6VSS7 320 aa29.58■■■□□ 2.33
R3hdm4-202ENSMUST00000171416 Ccdc180J3QNE4 1664 aa29.39■■■□□ 2.3
R3hdm4-202ENSMUST00000171416 BicraF8VPZ9 1578 aa29.34■■■□□ 2.29
R3hdm4-202ENSMUST00000171416 Baz1aO88379 1555 aa29.27■■■□□ 2.28
R3hdm4-202ENSMUST00000171416 Crybg2B7ZCC2 1516 aa29.15■■■□□ 2.26
R3hdm4-202ENSMUST00000171416 Zcchc6Q5BLK4 1491 aaKnown RBP28.71■■■□□ 2.19
R3hdm4-202ENSMUST00000171416 Pds5bQ4VA53 1446 aaKnown RBP28.46■■■□□ 2.15
R3hdm4-202ENSMUST00000171416 Smarca2Q6DIC0 1577 aa28.45■■■□□ 2.14
R3hdm4-202ENSMUST00000171416 Rtl1Q7M732 1744 aa28.32■■■□□ 2.12
R3hdm4-202ENSMUST00000171416 Atad2bE9Q166 1460 aaKnown RBP28.26■■■□□ 2.12
R3hdm4-202ENSMUST00000171416 Smarca4Q3TKT4 1613 aaKnown RBP28.17■■■□□ 2.1
R3hdm4-202ENSMUST00000171416 Cecr2E9Q2Z1 1453 aa28.15■■■□□ 2.1
R3hdm4-202ENSMUST00000171416 Thoc2B1AZI6 1594 aaKnown RBP28.1■■■□□ 2.09
R3hdm4-202ENSMUST00000171416 Iqgap2Q3UQ44 1575 aa27.97■■■□□ 2.07
R3hdm4-202ENSMUST00000171416 Dnajc5bQ9CQ94 199 aa27.89■■■□□ 2.06
R3hdm4-202ENSMUST00000171416 Ercc6F8VPZ5 1481 aa27.86■■■□□ 2.05
R3hdm4-202ENSMUST00000171416 Wdr62Q3U3T8 1523 aa27.68■■■□□ 2.02
R3hdm4-202ENSMUST00000171416 Brd4Q9ESU6 1400 aaKnown RBP27.66■■■□□ 2.02
R3hdm4-202ENSMUST00000171416 Cc2d2aQ8CFW7 1633 aa27.63■■■□□ 2.01
R3hdm4-202ENSMUST00000171416 Frmpd1A2AKB4 1549 aa27.62■■■□□ 2.01
R3hdm4-202ENSMUST00000171416 Ccdc136Q3TVA9 1136 aa27.62■■■□□ 2.01
R3hdm4-202ENSMUST00000171416 CftrP26361 1476 aa27.61■■■□□ 2.01
R3hdm4-202ENSMUST00000171416 Cttnbp2B9EJA2 1648 aa27.61■■■□□ 2.01
R3hdm4-202ENSMUST00000171416 Synj1Q8CHC4 1574 aa27.58■■■□□ 2.01
R3hdm4-202ENSMUST00000171416 Fam135aQ6NS59 1506 aa27.54■■■□□ 2
R3hdm4-202ENSMUST00000171416 Phldb1Q6PDH0 1371 aaKnown RBP27.39■■□□□ 1.98
R3hdm4-202ENSMUST00000171416 Baz1bQ9Z277 1479 aa27.31■■□□□ 1.96
R3hdm4-202ENSMUST00000171416 Trim41Q5NCC3 630 aa27.31■■□□□ 1.96
R3hdm4-202ENSMUST00000171416 Unc13aQ4KUS2 1712 aa27.27■■□□□ 1.96
R3hdm4-202ENSMUST00000171416 Esf1Q3V1V3 845 aaKnown RBP27.07■■□□□ 1.92
R3hdm4-202ENSMUST00000171416 Ubl4bQ9CQ84 188 aa27.06■■□□□ 1.92
R3hdm4-202ENSMUST00000171416 Mrc2Q64449 1479 aa26.88■■□□□ 1.89
R3hdm4-202ENSMUST00000171416 Rsf1E9PWW9 1441 aaKnown RBP26.83■■□□□ 1.89
R3hdm4-202ENSMUST00000171416 Golga3P55937 1487 aa26.81■■□□□ 1.88
R3hdm4-202ENSMUST00000171416 Top2bQ64511 1612 aa26.76■■□□□ 1.87
R3hdm4-202ENSMUST00000171416 Lamc3Q9R0B6 1581 aa26.75■■□□□ 1.87
R3hdm4-202ENSMUST00000171416 Kif15Q6P9L6 1387 aa26.72■■□□□ 1.87
R3hdm4-202ENSMUST00000171416 Cux2P70298 1426 aa26.63■■□□□ 1.85
R3hdm4-202ENSMUST00000171416 Cngb1E1AZ71 1325 aa26.58■■□□□ 1.85
R3hdm4-202ENSMUST00000171416 TnnQ80Z71 1560 aa26.58■■□□□ 1.85
R3hdm4-202ENSMUST00000171416 Fmn1Q05860 1466 aa26.44■■□□□ 1.82
R3hdm4-202ENSMUST00000171416 Kif21aQ9QXL2 1672 aa26.37■■□□□ 1.81
R3hdm4-202ENSMUST00000171416 Npm1Q61937 292 aaKnown RBP26.36■■□□□ 1.81
R3hdm4-202ENSMUST00000171416 Cep164Q5DU05 1446 aa26.34■■□□□ 1.81
R3hdm4-202ENSMUST00000171416 Ccdc18Q640L5 1455 aa26.34■■□□□ 1.81
R3hdm4-202ENSMUST00000171416 Camsap1A2AHC3 1581 aa26.3■■□□□ 1.8
R3hdm4-202ENSMUST00000171416 Lrriq1Q0P5X1 1673 aa26.26■■□□□ 1.79
R3hdm4-202ENSMUST00000171416 Il27Q8K3I6 234 aa26.14■■□□□ 1.78
R3hdm4-202ENSMUST00000171416 LrpprcQ6PB66 1392 aaKnown RBP26.13■■□□□ 1.77
R3hdm4-202ENSMUST00000171416 Ccdc88bQ4QRL3 1481 aa26.13■■□□□ 1.77
R3hdm4-202ENSMUST00000171416 Dhx29Q6PGC1 1365 aaKnown RBP26.1■■□□□ 1.77
R3hdm4-202ENSMUST00000171416 PogzQ8BZH4 1409 aaKnown RBP26.02■■□□□ 1.76
R3hdm4-202ENSMUST00000171416 Crocc2F6XLV1 1638 aa26.01■■□□□ 1.75
R3hdm4-202ENSMUST00000171416 Top2aQ01320 1528 aaKnown RBP26■■□□□ 1.75
R3hdm4-202ENSMUST00000171416 Urb2E9Q7L1 1524 aaKnown RBP25.97■■□□□ 1.75
R3hdm4-202ENSMUST00000171416 Grin2bQ01097 1482 aa25.97■■□□□ 1.75
R3hdm4-202ENSMUST00000171416 Plb1Q3TTY0 1478 aa25.94■■□□□ 1.74
R3hdm4-202ENSMUST00000171416 Chic1Q8CBW7 227 aa25.93■■□□□ 1.74
R3hdm4-202ENSMUST00000171416 Eif4g3Q80XI3 1579 aaKnown RBP25.92■■□□□ 1.74
R3hdm4-202ENSMUST00000171416 Duox2A2AQ99 1517 aa25.89■■□□□ 1.74
R3hdm4-202ENSMUST00000171416 HrcG5E8J6 738 aa25.86■■□□□ 1.73
R3hdm4-202ENSMUST00000171416 NrkQ9R0G8 1455 aa25.8■■□□□ 1.72
R3hdm4-202ENSMUST00000171416 Efcab5A0JP43 1406 aa25.79■■□□□ 1.72
R3hdm4-202ENSMUST00000171416 Ift140E9PY46 1464 aa25.78■■□□□ 1.72
R3hdm4-202ENSMUST00000171416 Samd9lQ69Z37 1561 aa25.7■■□□□ 1.7
R3hdm4-202ENSMUST00000171416 Shroom4Q1W617 1475 aa25.68■■□□□ 1.7
R3hdm4-202ENSMUST00000171416 Disp1Q3TDN0 1521 aa25.63■■□□□ 1.69
R3hdm4-202ENSMUST00000171416 PtprkP35822 1457 aa25.61■■□□□ 1.69
R3hdm4-202ENSMUST00000171416 Rusc2Q80U22 1514 aa25.6■■□□□ 1.69
R3hdm4-202ENSMUST00000171416 Pbrm1Q8BSQ9 1634 aaKnown RBP25.6■■□□□ 1.69
R3hdm4-202ENSMUST00000171416 Nup160Q9Z0W3 1402 aaKnown RBP25.52■■□□□ 1.68
R3hdm4-202ENSMUST00000171416 Rad54l2Q99NG0 1466 aa25.48■■□□□ 1.67
R3hdm4-202ENSMUST00000171416 Setd1bQ8CFT2 1985 aa25.48■■□□□ 1.67
R3hdm4-202ENSMUST00000171416 Cc2d2bA0A286YDU8 1405 aa25.47■■□□□ 1.67
R3hdm4-202ENSMUST00000171416 Magi3Q9EQJ9 1476 aa25.45■■□□□ 1.66
R3hdm4-202ENSMUST00000171416 SynmQ70IV5 1561 aa25.44■■□□□ 1.66
R3hdm4-202ENSMUST00000171416 Grin2aP35436 1464 aa25.43■■□□□ 1.66
R3hdm4-202ENSMUST00000171416 Gpatch8A2A6A1 1505 aa25.41■■□□□ 1.66
R3hdm4-202ENSMUST00000171416 Shroom2A2ALU4 1481 aa25.38■■□□□ 1.65
R3hdm4-202ENSMUST00000171416 Npm2Q80W85 207 aa25.35■■□□□ 1.65
R3hdm4-202ENSMUST00000171416 Mroh2bQ7M6Y6 1581 aa25.35■■□□□ 1.65
R3hdm4-202ENSMUST00000171416 Rapgef2Q8CHG7 1496 aa25.35■■□□□ 1.65
R3hdm4-202ENSMUST00000171416 Pla2r1Q62028 1487 aa25.33■■□□□ 1.65
R3hdm4-202ENSMUST00000171416 Gab3Q8BSM5 595 aa25.32■■□□□ 1.64
R3hdm4-202ENSMUST00000171416 AqrQ8CFQ3 1481 aaKnown RBP25.31■■□□□ 1.64
R3hdm4-202ENSMUST00000171416 Zeb1Q64318 1117 aa25.29■■□□□ 1.64
R3hdm4-202ENSMUST00000171416 Map3k1P53349 1493 aa25.24■■□□□ 1.63
R3hdm4-202ENSMUST00000171416 Arhgap35Q91YM2 1499 aa25.22■■□□□ 1.63
R3hdm4-202ENSMUST00000171416 Eif4g1Q6NZJ6 1600 aaKnown RBP25.21■■□□□ 1.63
R3hdm4-202ENSMUST00000171416 Cep162Q6ZQ06 1403 aa25.16■■□□□ 1.62
Retrieved 100 of 22,080 RNA–protein pairs in 7.7 ms