RNA–Protein interactions for RNA: ENSMUST00000143643.1

Gm12055-201, mousemouse

TSL 1 (best) BASIC

Gene Gm12055, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12055-201ENSMUST00000143643 Gm35339A0A140LHH9 1649 aa17.82■□□□□ 0.44
Gm12055-201ENSMUST00000143643 NischQ80TM9 1593 aa17.67■□□□□ 0.42
Gm12055-201ENSMUST00000143643 Abcc9P70170 1546 aa17.16■□□□□ 0.34
Gm12055-201ENSMUST00000143643 Abcc8B2RUS7 1588 aa16.94■□□□□ 0.3
Gm12055-201ENSMUST00000143643 ScribQ80U72 1612 aa16.14■□□□□ 0.17
Gm12055-201ENSMUST00000143643 Dcaf1Q80TR8 1506 aa15.73■□□□□ 0.11
Gm12055-201ENSMUST00000143643 Kdm5dQ62240 1548 aa15.67■□□□□ 0.1
Gm12055-201ENSMUST00000143643 NacadQ5SWP3 1504 aa15.63■□□□□ 0.09
Gm12055-201ENSMUST00000143643 Rhox8Q6VSS7 320 aa15.61■□□□□ 0.09
Gm12055-201ENSMUST00000143643 Rb1cc1Q9ESK9 1588 aa15.47■□□□□ 0.07
Gm12055-201ENSMUST00000143643 Ccdc180J3QNE4 1664 aa15.46■□□□□ 0.07
Gm12055-201ENSMUST00000143643 Sycp2Q9CUU3 1500 aa15.3■□□□□ 0.04
Gm12055-201ENSMUST00000143643 Baz1aO88379 1555 aa15.27■□□□□ 0.03
Gm12055-201ENSMUST00000143643 Rtl1Q7M732 1744 aa15.25■□□□□ 0.03
Gm12055-201ENSMUST00000143643 Crybg2B7ZCC2 1516 aa15.11■□□□□ 0.01
Gm12055-201ENSMUST00000143643 BicraF8VPZ9 1578 aa15.04■□□□□ -0
Gm12055-201ENSMUST00000143643 Chic1Q8CBW7 227 aa15.04■□□□□ -0
Gm12055-201ENSMUST00000143643 Zcchc6Q5BLK4 1491 aaKnown RBP14.92□□□□□ -0.02
Gm12055-201ENSMUST00000143643 Smarca2Q6DIC0 1577 aa14.86□□□□□ -0.03
Gm12055-201ENSMUST00000143643 Cecr2E9Q2Z1 1453 aa14.57□□□□□ -0.08
Gm12055-201ENSMUST00000143643 Smarca4Q3TKT4 1613 aaKnown RBP14.56□□□□□ -0.08
Gm12055-201ENSMUST00000143643 Ccdc136Q3TVA9 1136 aa14.51□□□□□ -0.09
Gm12055-201ENSMUST00000143643 Pds5bQ4VA53 1446 aaKnown RBP14.49□□□□□ -0.09
Gm12055-201ENSMUST00000143643 Dnajc5bQ9CQ94 199 aa14.45□□□□□ -0.1
Gm12055-201ENSMUST00000143643 Atad2bE9Q166 1460 aaKnown RBP14.44□□□□□ -0.1
Gm12055-201ENSMUST00000143643 Brd4Q9ESU6 1400 aaKnown RBP14.43□□□□□ -0.1
Gm12055-201ENSMUST00000143643 Cttnbp2B9EJA2 1648 aa14.42□□□□□ -0.1
Gm12055-201ENSMUST00000143643 Iqgap2Q3UQ44 1575 aa14.42□□□□□ -0.1
Gm12055-201ENSMUST00000143643 Synj1Q8CHC4 1574 aa14.39□□□□□ -0.11
Gm12055-201ENSMUST00000143643 Trim41Q5NCC3 630 aa14.34□□□□□ -0.11
Gm12055-201ENSMUST00000143643 CftrP26361 1476 aa14.32□□□□□ -0.12
Gm12055-201ENSMUST00000143643 Thoc2B1AZI6 1594 aaKnown RBP14.28□□□□□ -0.12
Gm12055-201ENSMUST00000143643 Ercc6F8VPZ5 1481 aa14.25□□□□□ -0.13
Gm12055-201ENSMUST00000143643 Wdr62Q3U3T8 1523 aa14.2□□□□□ -0.14
Gm12055-201ENSMUST00000143643 Unc13aQ4KUS2 1712 aa14.18□□□□□ -0.14
Gm12055-201ENSMUST00000143643 Frmpd1A2AKB4 1549 aa14.15□□□□□ -0.14
Gm12055-201ENSMUST00000143643 Top2bQ64511 1612 aa14.09□□□□□ -0.15
Gm12055-201ENSMUST00000143643 Esf1Q3V1V3 845 aaKnown RBP14.09□□□□□ -0.15
Gm12055-201ENSMUST00000143643 Cc2d2aQ8CFW7 1633 aa14.08□□□□□ -0.16
Gm12055-201ENSMUST00000143643 Golga3P55937 1487 aa14.07□□□□□ -0.16
Gm12055-201ENSMUST00000143643 Fam135aQ6NS59 1506 aa14.02□□□□□ -0.16
Gm12055-201ENSMUST00000143643 Cngb1E1AZ71 1325 aa13.98□□□□□ -0.17
Gm12055-201ENSMUST00000143643 Mapk8ip2Q9ERE9 830 aa13.95□□□□□ -0.18
Gm12055-201ENSMUST00000143643 Phldb1Q6PDH0 1371 aaKnown RBP13.95□□□□□ -0.18
Gm12055-201ENSMUST00000143643 HrcG5E8J6 738 aa13.9□□□□□ -0.18
Gm12055-201ENSMUST00000143643 TnnQ80Z71 1560 aa13.87□□□□□ -0.19
Gm12055-201ENSMUST00000143643 Lamc3Q9R0B6 1581 aa13.87□□□□□ -0.19
Gm12055-201ENSMUST00000143643 Baz1bQ9Z277 1479 aa13.86□□□□□ -0.19
Gm12055-201ENSMUST00000143643 Fmn1Q05860 1466 aa13.85□□□□□ -0.19
Gm12055-201ENSMUST00000143643 Rsf1E9PWW9 1441 aaKnown RBP13.84□□□□□ -0.19
Gm12055-201ENSMUST00000143643 Ubl4bQ9CQ84 188 aa13.78□□□□□ -0.2
Gm12055-201ENSMUST00000143643 Ccdc88bQ4QRL3 1481 aa13.78□□□□□ -0.2
Gm12055-201ENSMUST00000143643 Kif15Q6P9L6 1387 aa13.77□□□□□ -0.21
Gm12055-201ENSMUST00000143643 Cep164Q5DU05 1446 aa13.74□□□□□ -0.21
Gm12055-201ENSMUST00000143643 Top2aQ01320 1528 aaKnown RBP13.69□□□□□ -0.22
Gm12055-201ENSMUST00000143643 Camsap1A2AHC3 1581 aa13.68□□□□□ -0.22
Gm12055-201ENSMUST00000143643 Mrc2Q64449 1479 aa13.67□□□□□ -0.22
Gm12055-201ENSMUST00000143643 Cux2P70298 1426 aa13.66□□□□□ -0.22
Gm12055-201ENSMUST00000143643 Ccdc18Q640L5 1455 aa13.63□□□□□ -0.23
Gm12055-201ENSMUST00000143643 Kif21aQ9QXL2 1672 aa13.59□□□□□ -0.23
Gm12055-201ENSMUST00000143643 Plppr3Q7TPB0 716 aa13.57□□□□□ -0.24
Gm12055-201ENSMUST00000143643 Npm1Q61937 292 aaKnown RBP13.54□□□□□ -0.24
Gm12055-201ENSMUST00000143643 Il27Q8K3I6 234 aa13.53□□□□□ -0.24
Gm12055-201ENSMUST00000143643 Grin2bQ01097 1482 aa13.48□□□□□ -0.25
Gm12055-201ENSMUST00000143643 NrkQ9R0G8 1455 aa13.45□□□□□ -0.26
Gm12055-201ENSMUST00000143643 Gab3Q8BSM5 595 aa13.45□□□□□ -0.26
Gm12055-201ENSMUST00000143643 Crocc2F6XLV1 1638 aa13.45□□□□□ -0.26
Gm12055-201ENSMUST00000143643 LrpprcQ6PB66 1392 aaKnown RBP13.45□□□□□ -0.26
Gm12055-201ENSMUST00000143643 Lrriq1Q0P5X1 1673 aa13.44□□□□□ -0.26
Gm12055-201ENSMUST00000143643 PogzQ8BZH4 1409 aaKnown RBP13.42□□□□□ -0.26
Gm12055-201ENSMUST00000143643 Phf23Q8BSN5 401 aa13.42□□□□□ -0.26
Gm12055-201ENSMUST00000143643 Shroom4Q1W617 1475 aa13.42□□□□□ -0.26
Gm12055-201ENSMUST00000143643 Rapgef2Q8CHG7 1496 aa13.42□□□□□ -0.26
Gm12055-201ENSMUST00000143643 Dhx29Q6PGC1 1365 aaKnown RBP13.4□□□□□ -0.26
Gm12055-201ENSMUST00000143643 Duox2A2AQ99 1517 aa13.38□□□□□ -0.27
Gm12055-201ENSMUST00000143643 Setd1bQ8CFT2 1985 aa13.36□□□□□ -0.27
Gm12055-201ENSMUST00000143643 PtprkP35822 1457 aa13.36□□□□□ -0.27
Gm12055-201ENSMUST00000143643 Eif4g1Q6NZJ6 1600 aaKnown RBP13.35□□□□□ -0.27
Gm12055-201ENSMUST00000143643 Efcab5A0JP43 1406 aa13.35□□□□□ -0.27
Gm12055-201ENSMUST00000143643 Samd9lQ69Z37 1561 aa13.33□□□□□ -0.28
Gm12055-201ENSMUST00000143643 Dnajc5P60904 198 aa13.32□□□□□ -0.28
Gm12055-201ENSMUST00000143643 Npm2Q80W85 207 aa13.32□□□□□ -0.28
Gm12055-201ENSMUST00000143643 Urb2E9Q7L1 1524 aaKnown RBP13.3□□□□□ -0.28
Gm12055-201ENSMUST00000143643 Cep162Q6ZQ06 1403 aa13.3□□□□□ -0.28
Gm12055-201ENSMUST00000143643 Pbrm1Q8BSQ9 1634 aaKnown RBP13.28□□□□□ -0.28
Gm12055-201ENSMUST00000143643 Plb1Q3TTY0 1478 aa13.27□□□□□ -0.29
Gm12055-201ENSMUST00000143643 SynmQ70IV5 1561 aa13.25□□□□□ -0.29
Gm12055-201ENSMUST00000143643 Arhgap35Q91YM2 1499 aa13.25□□□□□ -0.29
Gm12055-201ENSMUST00000143643 Mroh2bQ7M6Y6 1581 aa13.24□□□□□ -0.29
Gm12055-201ENSMUST00000143643 Map3k1P53349 1493 aa13.24□□□□□ -0.29
Gm12055-201ENSMUST00000143643 Eif4g3Q80XI3 1579 aaKnown RBP13.24□□□□□ -0.29
Gm12055-201ENSMUST00000143643 Ift140E9PY46 1464 aa13.23□□□□□ -0.29
Gm12055-201ENSMUST00000143643 Zeb1Q64318 1117 aa13.2□□□□□ -0.3
Gm12055-201ENSMUST00000143643 AqrQ8CFQ3 1481 aaKnown RBP13.19□□□□□ -0.3
Gm12055-201ENSMUST00000143643 Rad54l2Q99NG0 1466 aa13.17□□□□□ -0.3
Gm12055-201ENSMUST00000143643 Gpatch8A2A6A1 1505 aa13.16□□□□□ -0.3
Gm12055-201ENSMUST00000143643 Disp1Q3TDN0 1521 aa13.16□□□□□ -0.3
Gm12055-201ENSMUST00000143643 Myt1lP97500 1187 aa13.15□□□□□ -0.3
Gm12055-201ENSMUST00000143643 Magi3Q9EQJ9 1476 aa13.15□□□□□ -0.3
Gm12055-201ENSMUST00000143643 Polr1aO35134 1717 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 29.4 ms