RNA–Protein interactions for RNA: ENSMUST00000126198.2

Fam78b-202, Transcript of Protein FAM78B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Fam78b, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78b-202ENSMUST00000126198 Gm35339A0A140LHH9 1649 aa22.97■■□□□ 1.27
Fam78b-202ENSMUST00000126198 NischQ80TM9 1593 aa22.94■■□□□ 1.26
Fam78b-202ENSMUST00000126198 Abcc9P70170 1546 aa22.2■■□□□ 1.15
Fam78b-202ENSMUST00000126198 Abcc8B2RUS7 1588 aa22.05■■□□□ 1.12
Fam78b-202ENSMUST00000126198 ScribQ80U72 1612 aa21.06■□□□□ 0.96
Fam78b-202ENSMUST00000126198 Kdm5dQ62240 1548 aa20.45■□□□□ 0.86
Fam78b-202ENSMUST00000126198 NacadQ5SWP3 1504 aa20.4■□□□□ 0.86
Fam78b-202ENSMUST00000126198 Dcaf1Q80TR8 1506 aa20.33■□□□□ 0.84
Fam78b-202ENSMUST00000126198 Rhox8Q6VSS7 320 aa20.32■□□□□ 0.84
Fam78b-202ENSMUST00000126198 Rb1cc1Q9ESK9 1588 aa20.02■□□□□ 0.8
Fam78b-202ENSMUST00000126198 Sycp2Q9CUU3 1500 aa20■□□□□ 0.79
Fam78b-202ENSMUST00000126198 Baz1aO88379 1555 aa19.74■□□□□ 0.75
Fam78b-202ENSMUST00000126198 BicraF8VPZ9 1578 aa19.7■□□□□ 0.74
Fam78b-202ENSMUST00000126198 Ccdc180J3QNE4 1664 aa19.68■□□□□ 0.74
Fam78b-202ENSMUST00000126198 Crybg2B7ZCC2 1516 aa19.56■□□□□ 0.72
Fam78b-202ENSMUST00000126198 Zcchc6Q5BLK4 1491 aaKnown RBP19.46■□□□□ 0.71
Fam78b-202ENSMUST00000126198 Smarca2Q6DIC0 1577 aa19.21■□□□□ 0.67
Fam78b-202ENSMUST00000126198 Rtl1Q7M732 1744 aa19.19■□□□□ 0.66
Fam78b-202ENSMUST00000126198 Cecr2E9Q2Z1 1453 aa19.08■□□□□ 0.65
Fam78b-202ENSMUST00000126198 Ccdc136Q3TVA9 1136 aa19■□□□□ 0.63
Fam78b-202ENSMUST00000126198 Pds5bQ4VA53 1446 aaKnown RBP19■□□□□ 0.63
Fam78b-202ENSMUST00000126198 Atad2bE9Q166 1460 aaKnown RBP18.92■□□□□ 0.62
Fam78b-202ENSMUST00000126198 Smarca4Q3TKT4 1613 aaKnown RBP18.91■□□□□ 0.62
Fam78b-202ENSMUST00000126198 Iqgap2Q3UQ44 1575 aa18.78■□□□□ 0.6
Fam78b-202ENSMUST00000126198 Dnajc5bQ9CQ94 199 aa18.72■□□□□ 0.59
Fam78b-202ENSMUST00000126198 Thoc2B1AZI6 1594 aaKnown RBP18.7■□□□□ 0.58
Fam78b-202ENSMUST00000126198 Brd4Q9ESU6 1400 aaKnown RBP18.69■□□□□ 0.58
Fam78b-202ENSMUST00000126198 Synj1Q8CHC4 1574 aa18.68■□□□□ 0.58
Fam78b-202ENSMUST00000126198 CftrP26361 1476 aa18.67■□□□□ 0.58
Fam78b-202ENSMUST00000126198 Ercc6F8VPZ5 1481 aa18.61■□□□□ 0.57
Fam78b-202ENSMUST00000126198 Trim41Q5NCC3 630 aa18.6■□□□□ 0.57
Fam78b-202ENSMUST00000126198 Cttnbp2B9EJA2 1648 aa18.58■□□□□ 0.56
Fam78b-202ENSMUST00000126198 Frmpd1A2AKB4 1549 aa18.55■□□□□ 0.56
Fam78b-202ENSMUST00000126198 Wdr62Q3U3T8 1523 aa18.54■□□□□ 0.56
Fam78b-202ENSMUST00000126198 Cc2d2aQ8CFW7 1633 aa18.47■□□□□ 0.55
Fam78b-202ENSMUST00000126198 Esf1Q3V1V3 845 aaKnown RBP18.44■□□□□ 0.54
Fam78b-202ENSMUST00000126198 Fam135aQ6NS59 1506 aa18.34■□□□□ 0.53
Fam78b-202ENSMUST00000126198 Phldb1Q6PDH0 1371 aaKnown RBP18.34■□□□□ 0.53
Fam78b-202ENSMUST00000126198 Unc13aQ4KUS2 1712 aa18.31■□□□□ 0.52
Fam78b-202ENSMUST00000126198 Ubl4bQ9CQ84 188 aa18.23■□□□□ 0.51
Fam78b-202ENSMUST00000126198 Cngb1E1AZ71 1325 aa18.22■□□□□ 0.51
Fam78b-202ENSMUST00000126198 Golga3P55937 1487 aa18.2■□□□□ 0.5
Fam78b-202ENSMUST00000126198 Top2bQ64511 1612 aa18.11■□□□□ 0.49
Fam78b-202ENSMUST00000126198 Rsf1E9PWW9 1441 aaKnown RBP18.06■□□□□ 0.48
Fam78b-202ENSMUST00000126198 Kif15Q6P9L6 1387 aa18.05■□□□□ 0.48
Fam78b-202ENSMUST00000126198 Baz1bQ9Z277 1479 aa18■□□□□ 0.47
Fam78b-202ENSMUST00000126198 Lamc3Q9R0B6 1581 aa17.99■□□□□ 0.47
Fam78b-202ENSMUST00000126198 Mrc2Q64449 1479 aa17.95■□□□□ 0.46
Fam78b-202ENSMUST00000126198 Cux2P70298 1426 aa17.94■□□□□ 0.46
Fam78b-202ENSMUST00000126198 TnnQ80Z71 1560 aa17.9■□□□□ 0.46
Fam78b-202ENSMUST00000126198 Ccdc88bQ4QRL3 1481 aa17.89■□□□□ 0.45
Fam78b-202ENSMUST00000126198 Fmn1Q05860 1466 aa17.89■□□□□ 0.45
Fam78b-202ENSMUST00000126198 Chic1Q8CBW7 227 aa17.87■□□□□ 0.45
Fam78b-202ENSMUST00000126198 Il27Q8K3I6 234 aa17.82■□□□□ 0.44
Fam78b-202ENSMUST00000126198 HrcG5E8J6 738 aa17.8■□□□□ 0.44
Fam78b-202ENSMUST00000126198 Npm1Q61937 292 aaKnown RBP17.79■□□□□ 0.44
Fam78b-202ENSMUST00000126198 Camsap1A2AHC3 1581 aa17.73■□□□□ 0.43
Fam78b-202ENSMUST00000126198 Ccdc18Q640L5 1455 aa17.73■□□□□ 0.43
Fam78b-202ENSMUST00000126198 Cep164Q5DU05 1446 aa17.7■□□□□ 0.42
Fam78b-202ENSMUST00000126198 Kif21aQ9QXL2 1672 aa17.69■□□□□ 0.42
Fam78b-202ENSMUST00000126198 Top2aQ01320 1528 aaKnown RBP17.64■□□□□ 0.41
Fam78b-202ENSMUST00000126198 LrpprcQ6PB66 1392 aaKnown RBP17.62■□□□□ 0.41
Fam78b-202ENSMUST00000126198 Dhx29Q6PGC1 1365 aaKnown RBP17.59■□□□□ 0.41
Fam78b-202ENSMUST00000126198 Lrriq1Q0P5X1 1673 aa17.54■□□□□ 0.4
Fam78b-202ENSMUST00000126198 Grin2bQ01097 1482 aa17.54■□□□□ 0.4
Fam78b-202ENSMUST00000126198 PogzQ8BZH4 1409 aaKnown RBP17.53■□□□□ 0.4
Fam78b-202ENSMUST00000126198 Gab3Q8BSM5 595 aa17.52■□□□□ 0.4
Fam78b-202ENSMUST00000126198 Duox2A2AQ99 1517 aa17.48■□□□□ 0.39
Fam78b-202ENSMUST00000126198 Crocc2F6XLV1 1638 aa17.47■□□□□ 0.39
Fam78b-202ENSMUST00000126198 Plb1Q3TTY0 1478 aa17.46■□□□□ 0.39
Fam78b-202ENSMUST00000126198 PtprkP35822 1457 aa17.45■□□□□ 0.38
Fam78b-202ENSMUST00000126198 Urb2E9Q7L1 1524 aaKnown RBP17.45■□□□□ 0.38
Fam78b-202ENSMUST00000126198 NrkQ9R0G8 1455 aa17.42■□□□□ 0.38
Fam78b-202ENSMUST00000126198 Efcab5A0JP43 1406 aa17.39■□□□□ 0.37
Fam78b-202ENSMUST00000126198 Shroom4Q1W617 1475 aa17.37■□□□□ 0.37
Fam78b-202ENSMUST00000126198 Npm2Q80W85 207 aa17.34■□□□□ 0.37
Fam78b-202ENSMUST00000126198 Samd9lQ69Z37 1561 aa17.34■□□□□ 0.37
Fam78b-202ENSMUST00000126198 Rapgef2Q8CHG7 1496 aa17.3■□□□□ 0.36
Fam78b-202ENSMUST00000126198 Rad54l2Q99NG0 1466 aa17.27■□□□□ 0.36
Fam78b-202ENSMUST00000126198 Disp1Q3TDN0 1521 aa17.26■□□□□ 0.35
Fam78b-202ENSMUST00000126198 Ift140E9PY46 1464 aa17.26■□□□□ 0.35
Fam78b-202ENSMUST00000126198 Zeb1Q64318 1117 aa17.25■□□□□ 0.35
Fam78b-202ENSMUST00000126198 Eif4g3Q80XI3 1579 aaKnown RBP17.25■□□□□ 0.35
Fam78b-202ENSMUST00000126198 Cep162Q6ZQ06 1403 aa17.19■□□□□ 0.34
Fam78b-202ENSMUST00000126198 Setd1bQ8CFT2 1985 aa17.18■□□□□ 0.34
Fam78b-202ENSMUST00000126198 Mroh2bQ7M6Y6 1581 aa17.18■□□□□ 0.34
Fam78b-202ENSMUST00000126198 Arhgap35Q91YM2 1499 aa17.17■□□□□ 0.34
Fam78b-202ENSMUST00000126198 SynmQ70IV5 1561 aa17.16■□□□□ 0.34
Fam78b-202ENSMUST00000126198 Magi3Q9EQJ9 1476 aa17.16■□□□□ 0.34
Fam78b-202ENSMUST00000126198 Myt1lP97500 1187 aa17.14■□□□□ 0.33
Fam78b-202ENSMUST00000126198 Grin2aP35436 1464 aa17.14■□□□□ 0.33
Fam78b-202ENSMUST00000126198 Nup160Q9Z0W3 1402 aaKnown RBP17.14■□□□□ 0.33
Fam78b-202ENSMUST00000126198 Eif4g1Q6NZJ6 1600 aaKnown RBP17.13■□□□□ 0.33
Fam78b-202ENSMUST00000126198 Rusc2Q80U22 1514 aa17.11■□□□□ 0.33
Fam78b-202ENSMUST00000126198 Pla2r1Q62028 1487 aa17.1■□□□□ 0.33
Fam78b-202ENSMUST00000126198 Pbrm1Q8BSQ9 1634 aaKnown RBP17.08■□□□□ 0.33
Fam78b-202ENSMUST00000126198 Cc2d2bA0A286YDU8 1405 aa17.06■□□□□ 0.32
Fam78b-202ENSMUST00000126198 Map3k1P53349 1493 aa17.06■□□□□ 0.32
Fam78b-202ENSMUST00000126198 Carmil1Q6EDY6 1374 aa17.02■□□□□ 0.32
Fam78b-202ENSMUST00000126198 Clip1Q922J3 1391 aa17■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 9.4 ms