RNA–Protein interactions for RNA: ENSMUST00000113701.7

Tpm1-214, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 5 BASIC

Gene Tpm1, Length 1,677 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-214ENSMUST00000113701 Gm35339A0A140LHH9 1649 aa32.99■■■□□ 2.87
Tpm1-214ENSMUST00000113701 NischQ80TM9 1593 aa32.67■■■□□ 2.82
Tpm1-214ENSMUST00000113701 Abcc9P70170 1546 aa31.74■■■□□ 2.67
Tpm1-214ENSMUST00000113701 Abcc8B2RUS7 1588 aa31.45■■■□□ 2.63
Tpm1-214ENSMUST00000113701 ScribQ80U72 1612 aa29.93■■■□□ 2.38
Tpm1-214ENSMUST00000113701 Dcaf1Q80TR8 1506 aa29.27■■■□□ 2.28
Tpm1-214ENSMUST00000113701 NacadQ5SWP3 1504 aa29.12■■■□□ 2.25
Tpm1-214ENSMUST00000113701 Kdm5dQ62240 1548 aa29.08■■■□□ 2.25
Tpm1-214ENSMUST00000113701 Rhox8Q6VSS7 320 aa28.57■■■□□ 2.16
Tpm1-214ENSMUST00000113701 Rb1cc1Q9ESK9 1588 aa28.51■■■□□ 2.15
Tpm1-214ENSMUST00000113701 Sycp2Q9CUU3 1500 aa28.5■■■□□ 2.15
Tpm1-214ENSMUST00000113701 Ccdc180J3QNE4 1664 aa28.46■■■□□ 2.15
Tpm1-214ENSMUST00000113701 Baz1aO88379 1555 aa28.2■■■□□ 2.11
Tpm1-214ENSMUST00000113701 Crybg2B7ZCC2 1516 aa28.15■■■□□ 2.1
Tpm1-214ENSMUST00000113701 BicraF8VPZ9 1578 aa27.98■■■□□ 2.07
Tpm1-214ENSMUST00000113701 Rtl1Q7M732 1744 aa27.54■■■□□ 2
Tpm1-214ENSMUST00000113701 Zcchc6Q5BLK4 1491 aaKnown RBP27.53■■■□□ 2
Tpm1-214ENSMUST00000113701 Smarca2Q6DIC0 1577 aa27.46■■□□□ 1.99
Tpm1-214ENSMUST00000113701 Pds5bQ4VA53 1446 aaKnown RBP27.11■■□□□ 1.93
Tpm1-214ENSMUST00000113701 Cecr2E9Q2Z1 1453 aa27■■□□□ 1.91
Tpm1-214ENSMUST00000113701 Smarca4Q3TKT4 1613 aaKnown RBP26.98■■□□□ 1.91
Tpm1-214ENSMUST00000113701 Atad2bE9Q166 1460 aaKnown RBP26.98■■□□□ 1.91
Tpm1-214ENSMUST00000113701 Iqgap2Q3UQ44 1575 aa26.72■■□□□ 1.87
Tpm1-214ENSMUST00000113701 Brd4Q9ESU6 1400 aaKnown RBP26.7■■□□□ 1.87
Tpm1-214ENSMUST00000113701 Thoc2B1AZI6 1594 aaKnown RBP26.65■■□□□ 1.86
Tpm1-214ENSMUST00000113701 Ccdc136Q3TVA9 1136 aa26.63■■□□□ 1.85
Tpm1-214ENSMUST00000113701 CftrP26361 1476 aa26.58■■□□□ 1.84
Tpm1-214ENSMUST00000113701 Cttnbp2B9EJA2 1648 aa26.57■■□□□ 1.84
Tpm1-214ENSMUST00000113701 Synj1Q8CHC4 1574 aa26.53■■□□□ 1.84
Tpm1-214ENSMUST00000113701 Ercc6F8VPZ5 1481 aa26.49■■□□□ 1.83
Tpm1-214ENSMUST00000113701 Trim41Q5NCC3 630 aa26.45■■□□□ 1.82
Tpm1-214ENSMUST00000113701 Wdr62Q3U3T8 1523 aa26.42■■□□□ 1.82
Tpm1-214ENSMUST00000113701 Frmpd1A2AKB4 1549 aa26.36■■□□□ 1.81
Tpm1-214ENSMUST00000113701 Dnajc5bQ9CQ94 199 aa26.31■■□□□ 1.8
Tpm1-214ENSMUST00000113701 Fam135aQ6NS59 1506 aa26.19■■□□□ 1.78
Tpm1-214ENSMUST00000113701 Cc2d2aQ8CFW7 1633 aa26.17■■□□□ 1.78
Tpm1-214ENSMUST00000113701 Phldb1Q6PDH0 1371 aaKnown RBP26.09■■□□□ 1.77
Tpm1-214ENSMUST00000113701 Baz1bQ9Z277 1479 aa26.09■■□□□ 1.77
Tpm1-214ENSMUST00000113701 Unc13aQ4KUS2 1712 aa26.03■■□□□ 1.76
Tpm1-214ENSMUST00000113701 Golga3P55937 1487 aa25.96■■□□□ 1.75
Tpm1-214ENSMUST00000113701 Esf1Q3V1V3 845 aaKnown RBP25.93■■□□□ 1.74
Tpm1-214ENSMUST00000113701 Top2bQ64511 1612 aa25.9■■□□□ 1.74
Tpm1-214ENSMUST00000113701 Chic1Q8CBW7 227 aa25.76■■□□□ 1.71
Tpm1-214ENSMUST00000113701 Rsf1E9PWW9 1441 aaKnown RBP25.71■■□□□ 1.71
Tpm1-214ENSMUST00000113701 Lamc3Q9R0B6 1581 aa25.71■■□□□ 1.71
Tpm1-214ENSMUST00000113701 Ubl4bQ9CQ84 188 aa25.69■■□□□ 1.7
Tpm1-214ENSMUST00000113701 TnnQ80Z71 1560 aa25.62■■□□□ 1.69
Tpm1-214ENSMUST00000113701 Cngb1E1AZ71 1325 aa25.59■■□□□ 1.69
Tpm1-214ENSMUST00000113701 Fmn1Q05860 1466 aa25.56■■□□□ 1.68
Tpm1-214ENSMUST00000113701 Kif15Q6P9L6 1387 aa25.54■■□□□ 1.68
Tpm1-214ENSMUST00000113701 Mrc2Q64449 1479 aa25.52■■□□□ 1.68
Tpm1-214ENSMUST00000113701 HrcG5E8J6 738 aa25.48■■□□□ 1.67
Tpm1-214ENSMUST00000113701 Cux2P70298 1426 aa25.41■■□□□ 1.66
Tpm1-214ENSMUST00000113701 Ccdc88bQ4QRL3 1481 aa25.33■■□□□ 1.64
Tpm1-214ENSMUST00000113701 Camsap1A2AHC3 1581 aa25.26■■□□□ 1.63
Tpm1-214ENSMUST00000113701 Ccdc18Q640L5 1455 aa25.26■■□□□ 1.63
Tpm1-214ENSMUST00000113701 Top2aQ01320 1528 aaKnown RBP25.2■■□□□ 1.62
Tpm1-214ENSMUST00000113701 Cep164Q5DU05 1446 aa25.18■■□□□ 1.62
Tpm1-214ENSMUST00000113701 Npm1Q61937 292 aaKnown RBP25.14■■□□□ 1.62
Tpm1-214ENSMUST00000113701 Kif21aQ9QXL2 1672 aa25.08■■□□□ 1.61
Tpm1-214ENSMUST00000113701 LrpprcQ6PB66 1392 aaKnown RBP25.04■■□□□ 1.6
Tpm1-214ENSMUST00000113701 Grin2bQ01097 1482 aa24.98■■□□□ 1.59
Tpm1-214ENSMUST00000113701 PogzQ8BZH4 1409 aaKnown RBP24.95■■□□□ 1.59
Tpm1-214ENSMUST00000113701 Dhx29Q6PGC1 1365 aaKnown RBP24.94■■□□□ 1.58
Tpm1-214ENSMUST00000113701 Il27Q8K3I6 234 aa24.93■■□□□ 1.58
Tpm1-214ENSMUST00000113701 NrkQ9R0G8 1455 aa24.92■■□□□ 1.58
Tpm1-214ENSMUST00000113701 Lrriq1Q0P5X1 1673 aa24.89■■□□□ 1.58
Tpm1-214ENSMUST00000113701 Crocc2F6XLV1 1638 aa24.85■■□□□ 1.57
Tpm1-214ENSMUST00000113701 Efcab5A0JP43 1406 aa24.84■■□□□ 1.57
Tpm1-214ENSMUST00000113701 Duox2A2AQ99 1517 aa24.83■■□□□ 1.56
Tpm1-214ENSMUST00000113701 Shroom4Q1W617 1475 aa24.78■■□□□ 1.56
Tpm1-214ENSMUST00000113701 Urb2E9Q7L1 1524 aaKnown RBP24.74■■□□□ 1.55
Tpm1-214ENSMUST00000113701 Plb1Q3TTY0 1478 aa24.71■■□□□ 1.55
Tpm1-214ENSMUST00000113701 PtprkP35822 1457 aa24.69■■□□□ 1.54
Tpm1-214ENSMUST00000113701 Rapgef2Q8CHG7 1496 aa24.67■■□□□ 1.54
Tpm1-214ENSMUST00000113701 Ift140E9PY46 1464 aa24.63■■□□□ 1.53
Tpm1-214ENSMUST00000113701 Samd9lQ69Z37 1561 aa24.62■■□□□ 1.53
Tpm1-214ENSMUST00000113701 Eif4g3Q80XI3 1579 aaKnown RBP24.6■■□□□ 1.53
Tpm1-214ENSMUST00000113701 Eif4g1Q6NZJ6 1600 aaKnown RBP24.53■■□□□ 1.52
Tpm1-214ENSMUST00000113701 Pbrm1Q8BSQ9 1634 aaKnown RBP24.53■■□□□ 1.52
Tpm1-214ENSMUST00000113701 Disp1Q3TDN0 1521 aa24.51■■□□□ 1.51
Tpm1-214ENSMUST00000113701 Gab3Q8BSM5 595 aa24.5■■□□□ 1.51
Tpm1-214ENSMUST00000113701 Mroh2bQ7M6Y6 1581 aa24.48■■□□□ 1.51
Tpm1-214ENSMUST00000113701 Map3k1P53349 1493 aa24.48■■□□□ 1.51
Tpm1-214ENSMUST00000113701 Gpatch8A2A6A1 1505 aa24.48■■□□□ 1.51
Tpm1-214ENSMUST00000113701 SynmQ70IV5 1561 aa24.47■■□□□ 1.51
Tpm1-214ENSMUST00000113701 Cep162Q6ZQ06 1403 aa24.46■■□□□ 1.51
Tpm1-214ENSMUST00000113701 Nup160Q9Z0W3 1402 aaKnown RBP24.44■■□□□ 1.5
Tpm1-214ENSMUST00000113701 Arhgap35Q91YM2 1499 aa24.42■■□□□ 1.5
Tpm1-214ENSMUST00000113701 Npm2Q80W85 207 aa24.42■■□□□ 1.5
Tpm1-214ENSMUST00000113701 Magi3Q9EQJ9 1476 aa24.4■■□□□ 1.5
Tpm1-214ENSMUST00000113701 Rusc2Q80U22 1514 aa24.38■■□□□ 1.49
Tpm1-214ENSMUST00000113701 Setd1bQ8CFT2 1985 aa24.38■■□□□ 1.49
Tpm1-214ENSMUST00000113701 Rad54l2Q99NG0 1466 aa24.38■■□□□ 1.49
Tpm1-214ENSMUST00000113701 AqrQ8CFQ3 1481 aaKnown RBP24.37■■□□□ 1.49
Tpm1-214ENSMUST00000113701 Cc2d2bA0A286YDU8 1405 aa24.36■■□□□ 1.49
Tpm1-214ENSMUST00000113701 Grin2aP35436 1464 aa24.35■■□□□ 1.49
Tpm1-214ENSMUST00000113701 Pla2r1Q62028 1487 aa24.31■■□□□ 1.48
Tpm1-214ENSMUST00000113701 Carmil1Q6EDY6 1374 aa24.27■■□□□ 1.48
Tpm1-214ENSMUST00000113701 Zeb1Q64318 1117 aa24.23■■□□□ 1.47
Retrieved 100 of 22,080 RNA–protein pairs in 9.2 ms