RNA–Protein interactions for RNA: ENSMUST00000109737.8

H2afv-202, Transcript of Histone H2A.V, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene H2afv, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2afv-202ENSMUST00000109737 NischQ80TM9 1593 aa24.66■■□□□ 1.54
H2afv-202ENSMUST00000109737 Gm35339A0A140LHH9 1649 aa24.62■■□□□ 1.53
H2afv-202ENSMUST00000109737 Abcc9P70170 1546 aa23.93■■□□□ 1.42
H2afv-202ENSMUST00000109737 Abcc8B2RUS7 1588 aa23.67■■□□□ 1.38
H2afv-202ENSMUST00000109737 ScribQ80U72 1612 aa22.41■■□□□ 1.18
H2afv-202ENSMUST00000109737 Rhox8Q6VSS7 320 aa22.06■■□□□ 1.12
H2afv-202ENSMUST00000109737 Dcaf1Q80TR8 1506 aa21.95■■□□□ 1.1
H2afv-202ENSMUST00000109737 Kdm5dQ62240 1548 aa21.84■■□□□ 1.09
H2afv-202ENSMUST00000109737 NacadQ5SWP3 1504 aa21.8■■□□□ 1.08
H2afv-202ENSMUST00000109737 Rb1cc1Q9ESK9 1588 aa21.54■■□□□ 1.04
H2afv-202ENSMUST00000109737 Chic1Q8CBW7 227 aa21.47■■□□□ 1.03
H2afv-202ENSMUST00000109737 Sycp2Q9CUU3 1500 aa21.35■■□□□ 1.01
H2afv-202ENSMUST00000109737 Baz1aO88379 1555 aa21.28■■□□□ 1
H2afv-202ENSMUST00000109737 Ccdc180J3QNE4 1664 aa21.27■■□□□ 1
H2afv-202ENSMUST00000109737 Crybg2B7ZCC2 1516 aa21.1■□□□□ 0.97
H2afv-202ENSMUST00000109737 Rtl1Q7M732 1744 aa20.98■□□□□ 0.95
H2afv-202ENSMUST00000109737 Mapk8ip2Q9ERE9 830 aa20.97■□□□□ 0.95
H2afv-202ENSMUST00000109737 BicraF8VPZ9 1578 aa20.95■□□□□ 0.94
H2afv-202ENSMUST00000109737 Zcchc6Q5BLK4 1491 aaKnown RBP20.9■□□□□ 0.94
H2afv-202ENSMUST00000109737 Smarca2Q6DIC0 1577 aa20.73■□□□□ 0.91
H2afv-202ENSMUST00000109737 Ccdc136Q3TVA9 1136 aa20.55■□□□□ 0.88
H2afv-202ENSMUST00000109737 Cecr2E9Q2Z1 1453 aa20.48■□□□□ 0.87
H2afv-202ENSMUST00000109737 Smarca4Q3TKT4 1613 aaKnown RBP20.24■□□□□ 0.83
H2afv-202ENSMUST00000109737 Trim41Q5NCC3 630 aa20.23■□□□□ 0.83
H2afv-202ENSMUST00000109737 Pds5bQ4VA53 1446 aaKnown RBP20.22■□□□□ 0.83
H2afv-202ENSMUST00000109737 Brd4Q9ESU6 1400 aaKnown RBP20.21■□□□□ 0.83
H2afv-202ENSMUST00000109737 Atad2bE9Q166 1460 aaKnown RBP20.18■□□□□ 0.82
H2afv-202ENSMUST00000109737 Synj1Q8CHC4 1574 aa20.12■□□□□ 0.81
H2afv-202ENSMUST00000109737 CftrP26361 1476 aa20.1■□□□□ 0.81
H2afv-202ENSMUST00000109737 Iqgap2Q3UQ44 1575 aa20.04■□□□□ 0.8
H2afv-202ENSMUST00000109737 Cttnbp2B9EJA2 1648 aa19.98■□□□□ 0.79
H2afv-202ENSMUST00000109737 Esf1Q3V1V3 845 aaKnown RBP19.82■□□□□ 0.76
H2afv-202ENSMUST00000109737 Ercc6F8VPZ5 1481 aa19.79■□□□□ 0.76
H2afv-202ENSMUST00000109737 Frmpd1A2AKB4 1549 aa19.78■□□□□ 0.76
H2afv-202ENSMUST00000109737 Thoc2B1AZI6 1594 aaKnown RBP19.77■□□□□ 0.75
H2afv-202ENSMUST00000109737 Wdr62Q3U3T8 1523 aa19.77■□□□□ 0.75
H2afv-202ENSMUST00000109737 Golga3P55937 1487 aa19.76■□□□□ 0.75
H2afv-202ENSMUST00000109737 Cngb1E1AZ71 1325 aa19.72■□□□□ 0.75
H2afv-202ENSMUST00000109737 HrcG5E8J6 738 aa19.72■□□□□ 0.75
H2afv-202ENSMUST00000109737 Top2bQ64511 1612 aa19.61■□□□□ 0.73
H2afv-202ENSMUST00000109737 Dnajc5bQ9CQ94 199 aa19.51■□□□□ 0.71
H2afv-202ENSMUST00000109737 Phldb1Q6PDH0 1371 aaKnown RBP19.51■□□□□ 0.71
H2afv-202ENSMUST00000109737 Cc2d2aQ8CFW7 1633 aa19.5■□□□□ 0.71
H2afv-202ENSMUST00000109737 Rsf1E9PWW9 1441 aaKnown RBP19.48■□□□□ 0.71
H2afv-202ENSMUST00000109737 Fam135aQ6NS59 1506 aa19.46■□□□□ 0.71
H2afv-202ENSMUST00000109737 Unc13aQ4KUS2 1712 aa19.46■□□□□ 0.71
H2afv-202ENSMUST00000109737 Ccdc88bQ4QRL3 1481 aa19.44■□□□□ 0.7
H2afv-202ENSMUST00000109737 Fmn1Q05860 1466 aa19.37■□□□□ 0.69
H2afv-202ENSMUST00000109737 Ubl4bQ9CQ84 188 aa19.36■□□□□ 0.69
H2afv-202ENSMUST00000109737 Cep164Q5DU05 1446 aa19.35■□□□□ 0.69
H2afv-202ENSMUST00000109737 Lamc3Q9R0B6 1581 aa19.32■□□□□ 0.68
H2afv-202ENSMUST00000109737 Kif15Q6P9L6 1387 aa19.31■□□□□ 0.68
H2afv-202ENSMUST00000109737 TnnQ80Z71 1560 aa19.29■□□□□ 0.68
H2afv-202ENSMUST00000109737 Phf23Q8BSN5 401 aa19.18■□□□□ 0.66
H2afv-202ENSMUST00000109737 Baz1bQ9Z277 1479 aa19.17■□□□□ 0.66
H2afv-202ENSMUST00000109737 Cux2P70298 1426 aa19.14■□□□□ 0.66
H2afv-202ENSMUST00000109737 Top2aQ01320 1528 aaKnown RBP19.14■□□□□ 0.65
H2afv-202ENSMUST00000109737 Gab3Q8BSM5 595 aa19.07■□□□□ 0.64
H2afv-202ENSMUST00000109737 Il27Q8K3I6 234 aa19.05■□□□□ 0.64
H2afv-202ENSMUST00000109737 Camsap1A2AHC3 1581 aa19.04■□□□□ 0.64
H2afv-202ENSMUST00000109737 Mrc2Q64449 1479 aa19.03■□□□□ 0.64
H2afv-202ENSMUST00000109737 Ccdc18Q640L5 1455 aa19.02■□□□□ 0.64
H2afv-202ENSMUST00000109737 Npm1Q61937 292 aaKnown RBP19■□□□□ 0.63
H2afv-202ENSMUST00000109737 Grin2bQ01097 1482 aa18.88■□□□□ 0.61
H2afv-202ENSMUST00000109737 Rapgef2Q8CHG7 1496 aa18.88■□□□□ 0.61
H2afv-202ENSMUST00000109737 LrpprcQ6PB66 1392 aaKnown RBP18.87■□□□□ 0.61
H2afv-202ENSMUST00000109737 NrkQ9R0G8 1455 aa18.83■□□□□ 0.61
H2afv-202ENSMUST00000109737 PtprkP35822 1457 aa18.83■□□□□ 0.6
H2afv-202ENSMUST00000109737 PogzQ8BZH4 1409 aaKnown RBP18.81■□□□□ 0.6
H2afv-202ENSMUST00000109737 Dhx29Q6PGC1 1365 aaKnown RBP18.8■□□□□ 0.6
H2afv-202ENSMUST00000109737 Kif21aQ9QXL2 1672 aa18.78■□□□□ 0.6
H2afv-202ENSMUST00000109737 Shroom4Q1W617 1475 aa18.78■□□□□ 0.6
H2afv-202ENSMUST00000109737 Npm2Q80W85 207 aa18.77■□□□□ 0.6
H2afv-202ENSMUST00000109737 Duox2A2AQ99 1517 aa18.74■□□□□ 0.59
H2afv-202ENSMUST00000109737 Cep162Q6ZQ06 1403 aa18.74■□□□□ 0.59
H2afv-202ENSMUST00000109737 Efcab5A0JP43 1406 aa18.72■□□□□ 0.59
H2afv-202ENSMUST00000109737 Eif4g1Q6NZJ6 1600 aaKnown RBP18.65■□□□□ 0.58
H2afv-202ENSMUST00000109737 Crocc2F6XLV1 1638 aa18.64■□□□□ 0.57
H2afv-202ENSMUST00000109737 Arhgap35Q91YM2 1499 aa18.64■□□□□ 0.57
H2afv-202ENSMUST00000109737 Plb1Q3TTY0 1478 aa18.6■□□□□ 0.57
H2afv-202ENSMUST00000109737 Myt1lP97500 1187 aa18.6■□□□□ 0.57
H2afv-202ENSMUST00000109737 Urb2E9Q7L1 1524 aaKnown RBP18.57■□□□□ 0.56
H2afv-202ENSMUST00000109737 Samd9lQ69Z37 1561 aa18.57■□□□□ 0.56
H2afv-202ENSMUST00000109737 Mroh2bQ7M6Y6 1581 aa18.57■□□□□ 0.56
H2afv-202ENSMUST00000109737 Zeb1Q64318 1117 aa18.55■□□□□ 0.56
H2afv-202ENSMUST00000109737 Map3k1P53349 1493 aa18.54■□□□□ 0.56
H2afv-202ENSMUST00000109737 Lrriq1Q0P5X1 1673 aa18.53■□□□□ 0.56
H2afv-202ENSMUST00000109737 Plppr3Q7TPB0 716 aa18.52■□□□□ 0.55
H2afv-202ENSMUST00000109737 Rad54l2Q99NG0 1466 aa18.5■□□□□ 0.55
H2afv-202ENSMUST00000109737 SynmQ70IV5 1561 aa18.46■□□□□ 0.55
H2afv-202ENSMUST00000109737 Disp1Q3TDN0 1521 aa18.45■□□□□ 0.54
H2afv-202ENSMUST00000109737 Clip1Q922J3 1391 aa18.45■□□□□ 0.54
H2afv-202ENSMUST00000109737 AqrQ8CFQ3 1481 aaKnown RBP18.44■□□□□ 0.54
H2afv-202ENSMUST00000109737 Ift140E9PY46 1464 aa18.43■□□□□ 0.54
H2afv-202ENSMUST00000109737 Ehmt2Q9Z148 1263 aaKnown RBP18.43■□□□□ 0.54
H2afv-202ENSMUST00000109737 Carmil1Q6EDY6 1374 aa18.41■□□□□ 0.54
H2afv-202ENSMUST00000109737 Magi3Q9EQJ9 1476 aa18.38■□□□□ 0.53
H2afv-202ENSMUST00000109737 Pla2r1Q62028 1487 aa18.35■□□□□ 0.53
H2afv-202ENSMUST00000109737 Grin2aP35436 1464 aa18.35■□□□□ 0.53
H2afv-202ENSMUST00000109737 Nup160Q9Z0W3 1402 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 127.5 ms