RNA–Protein interactions for RNA: ENSMUST00000107814.9

Polr1e-203, Transcript of DNA-directed RNA polymerase I subunit RPA49, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Polr1e, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1e-203ENSMUST00000107814 Gm35339A0A140LHH9 1649 aa24.23■■□□□ 1.47
Polr1e-203ENSMUST00000107814 NischQ80TM9 1593 aa23.89■■□□□ 1.41
Polr1e-203ENSMUST00000107814 Abcc9P70170 1546 aa23.23■■□□□ 1.31
Polr1e-203ENSMUST00000107814 Abcc8B2RUS7 1588 aa23■■□□□ 1.27
Polr1e-203ENSMUST00000107814 ScribQ80U72 1612 aa22.03■■□□□ 1.12
Polr1e-203ENSMUST00000107814 Dcaf1Q80TR8 1506 aa21.36■■□□□ 1.01
Polr1e-203ENSMUST00000107814 Kdm5dQ62240 1548 aa21.34■■□□□ 1.01
Polr1e-203ENSMUST00000107814 NacadQ5SWP3 1504 aa21.32■■□□□ 1
Polr1e-203ENSMUST00000107814 Rb1cc1Q9ESK9 1588 aa20.89■□□□□ 0.93
Polr1e-203ENSMUST00000107814 Sycp2Q9CUU3 1500 aa20.88■□□□□ 0.93
Polr1e-203ENSMUST00000107814 Ccdc180J3QNE4 1664 aa20.82■□□□□ 0.92
Polr1e-203ENSMUST00000107814 Rhox8Q6VSS7 320 aa20.73■□□□□ 0.91
Polr1e-203ENSMUST00000107814 Baz1aO88379 1555 aa20.62■□□□□ 0.89
Polr1e-203ENSMUST00000107814 BicraF8VPZ9 1578 aa20.55■□□□□ 0.88
Polr1e-203ENSMUST00000107814 Crybg2B7ZCC2 1516 aa20.48■□□□□ 0.87
Polr1e-203ENSMUST00000107814 Rtl1Q7M732 1744 aa20.18■□□□□ 0.82
Polr1e-203ENSMUST00000107814 Zcchc6Q5BLK4 1491 aaKnown RBP20.14■□□□□ 0.81
Polr1e-203ENSMUST00000107814 Smarca2Q6DIC0 1577 aa20.08■□□□□ 0.81
Polr1e-203ENSMUST00000107814 Pds5bQ4VA53 1446 aaKnown RBP19.85■□□□□ 0.77
Polr1e-203ENSMUST00000107814 Smarca4Q3TKT4 1613 aaKnown RBP19.78■□□□□ 0.76
Polr1e-203ENSMUST00000107814 Atad2bE9Q166 1460 aaKnown RBP19.75■□□□□ 0.75
Polr1e-203ENSMUST00000107814 Cecr2E9Q2Z1 1453 aa19.72■□□□□ 0.75
Polr1e-203ENSMUST00000107814 Thoc2B1AZI6 1594 aaKnown RBP19.66■□□□□ 0.74
Polr1e-203ENSMUST00000107814 Iqgap2Q3UQ44 1575 aa19.62■□□□□ 0.73
Polr1e-203ENSMUST00000107814 Ercc6F8VPZ5 1481 aa19.48■□□□□ 0.71
Polr1e-203ENSMUST00000107814 Cttnbp2B9EJA2 1648 aa19.48■□□□□ 0.71
Polr1e-203ENSMUST00000107814 Brd4Q9ESU6 1400 aaKnown RBP19.45■□□□□ 0.7
Polr1e-203ENSMUST00000107814 Synj1Q8CHC4 1574 aa19.42■□□□□ 0.7
Polr1e-203ENSMUST00000107814 Wdr62Q3U3T8 1523 aa19.4■□□□□ 0.7
Polr1e-203ENSMUST00000107814 CftrP26361 1476 aa19.4■□□□□ 0.7
Polr1e-203ENSMUST00000107814 Ccdc136Q3TVA9 1136 aa19.31■□□□□ 0.68
Polr1e-203ENSMUST00000107814 Frmpd1A2AKB4 1549 aa19.3■□□□□ 0.68
Polr1e-203ENSMUST00000107814 Cc2d2aQ8CFW7 1633 aa19.29■□□□□ 0.68
Polr1e-203ENSMUST00000107814 Fam135aQ6NS59 1506 aa19.28■□□□□ 0.68
Polr1e-203ENSMUST00000107814 Unc13aQ4KUS2 1712 aa19.2■□□□□ 0.66
Polr1e-203ENSMUST00000107814 Dnajc5bQ9CQ94 199 aa19.2■□□□□ 0.66
Polr1e-203ENSMUST00000107814 Baz1bQ9Z277 1479 aa19.13■□□□□ 0.65
Polr1e-203ENSMUST00000107814 Trim41Q5NCC3 630 aa19.12■□□□□ 0.65
Polr1e-203ENSMUST00000107814 Phldb1Q6PDH0 1371 aaKnown RBP19.08■□□□□ 0.64
Polr1e-203ENSMUST00000107814 Top2bQ64511 1612 aa18.93■□□□□ 0.62
Polr1e-203ENSMUST00000107814 Golga3P55937 1487 aa18.87■□□□□ 0.61
Polr1e-203ENSMUST00000107814 Esf1Q3V1V3 845 aaKnown RBP18.87■□□□□ 0.61
Polr1e-203ENSMUST00000107814 Lamc3Q9R0B6 1581 aa18.81■□□□□ 0.6
Polr1e-203ENSMUST00000107814 Rsf1E9PWW9 1441 aaKnown RBP18.78■□□□□ 0.6
Polr1e-203ENSMUST00000107814 Mrc2Q64449 1479 aa18.76■□□□□ 0.59
Polr1e-203ENSMUST00000107814 TnnQ80Z71 1560 aa18.76■□□□□ 0.59
Polr1e-203ENSMUST00000107814 Ubl4bQ9CQ84 188 aa18.75■□□□□ 0.59
Polr1e-203ENSMUST00000107814 Kif15Q6P9L6 1387 aa18.67■□□□□ 0.58
Polr1e-203ENSMUST00000107814 Fmn1Q05860 1466 aa18.64■□□□□ 0.57
Polr1e-203ENSMUST00000107814 Cngb1E1AZ71 1325 aa18.62■□□□□ 0.57
Polr1e-203ENSMUST00000107814 Cux2P70298 1426 aa18.59■□□□□ 0.57
Polr1e-203ENSMUST00000107814 Camsap1A2AHC3 1581 aa18.52■□□□□ 0.55
Polr1e-203ENSMUST00000107814 Kif21aQ9QXL2 1672 aa18.5■□□□□ 0.55
Polr1e-203ENSMUST00000107814 Ccdc18Q640L5 1455 aa18.46■□□□□ 0.55
Polr1e-203ENSMUST00000107814 Ccdc88bQ4QRL3 1481 aa18.42■□□□□ 0.54
Polr1e-203ENSMUST00000107814 Cep164Q5DU05 1446 aa18.41■□□□□ 0.54
Polr1e-203ENSMUST00000107814 Top2aQ01320 1528 aaKnown RBP18.39■□□□□ 0.53
Polr1e-203ENSMUST00000107814 Lrriq1Q0P5X1 1673 aa18.38■□□□□ 0.53
Polr1e-203ENSMUST00000107814 Npm1Q61937 292 aaKnown RBP18.32■□□□□ 0.52
Polr1e-203ENSMUST00000107814 HrcG5E8J6 738 aa18.26■□□□□ 0.51
Polr1e-203ENSMUST00000107814 Crocc2F6XLV1 1638 aa18.26■□□□□ 0.51
Polr1e-203ENSMUST00000107814 LrpprcQ6PB66 1392 aaKnown RBP18.26■□□□□ 0.51
Polr1e-203ENSMUST00000107814 Grin2bQ01097 1482 aa18.25■□□□□ 0.51
Polr1e-203ENSMUST00000107814 Dhx29Q6PGC1 1365 aaKnown RBP18.24■□□□□ 0.51
Polr1e-203ENSMUST00000107814 PogzQ8BZH4 1409 aaKnown RBP18.23■□□□□ 0.51
Polr1e-203ENSMUST00000107814 Chic1Q8CBW7 227 aa18.19■□□□□ 0.5
Polr1e-203ENSMUST00000107814 Il27Q8K3I6 234 aa18.19■□□□□ 0.5
Polr1e-203ENSMUST00000107814 Eif4g3Q80XI3 1579 aaKnown RBP18.15■□□□□ 0.5
Polr1e-203ENSMUST00000107814 NrkQ9R0G8 1455 aa18.15■□□□□ 0.5
Polr1e-203ENSMUST00000107814 Urb2E9Q7L1 1524 aaKnown RBP18.15■□□□□ 0.5
Polr1e-203ENSMUST00000107814 Duox2A2AQ99 1517 aa18.14■□□□□ 0.49
Polr1e-203ENSMUST00000107814 Plb1Q3TTY0 1478 aa18.1■□□□□ 0.49
Polr1e-203ENSMUST00000107814 Samd9lQ69Z37 1561 aa18.09■□□□□ 0.49
Polr1e-203ENSMUST00000107814 Shroom4Q1W617 1475 aa18.08■□□□□ 0.49
Polr1e-203ENSMUST00000107814 Efcab5A0JP43 1406 aa18.07■□□□□ 0.48
Polr1e-203ENSMUST00000107814 Ift140E9PY46 1464 aa18.04■□□□□ 0.48
Polr1e-203ENSMUST00000107814 Pbrm1Q8BSQ9 1634 aaKnown RBP18.03■□□□□ 0.48
Polr1e-203ENSMUST00000107814 PtprkP35822 1457 aa17.99■□□□□ 0.47
Polr1e-203ENSMUST00000107814 Gpatch8A2A6A1 1505 aa17.97■□□□□ 0.47
Polr1e-203ENSMUST00000107814 Rusc2Q80U22 1514 aa17.95■□□□□ 0.46
Polr1e-203ENSMUST00000107814 Setd1bQ8CFT2 1985 aa17.92■□□□□ 0.46
Polr1e-203ENSMUST00000107814 SynmQ70IV5 1561 aa17.91■□□□□ 0.46
Polr1e-203ENSMUST00000107814 Rapgef2Q8CHG7 1496 aa17.91■□□□□ 0.46
Polr1e-203ENSMUST00000107814 Disp1Q3TDN0 1521 aa17.91■□□□□ 0.46
Polr1e-203ENSMUST00000107814 Eif4g1Q6NZJ6 1600 aaKnown RBP17.89■□□□□ 0.45
Polr1e-203ENSMUST00000107814 Nup160Q9Z0W3 1402 aaKnown RBP17.88■□□□□ 0.45
Polr1e-203ENSMUST00000107814 Magi3Q9EQJ9 1476 aa17.87■□□□□ 0.45
Polr1e-203ENSMUST00000107814 Grin2aP35436 1464 aa17.84■□□□□ 0.45
Polr1e-203ENSMUST00000107814 Mroh2bQ7M6Y6 1581 aa17.83■□□□□ 0.44
Polr1e-203ENSMUST00000107814 Map3k1P53349 1493 aa17.83■□□□□ 0.44
Polr1e-203ENSMUST00000107814 Rad54l2Q99NG0 1466 aa17.82■□□□□ 0.44
Polr1e-203ENSMUST00000107814 Cc2d2bA0A286YDU8 1405 aa17.8■□□□□ 0.44
Polr1e-203ENSMUST00000107814 Pla2r1Q62028 1487 aa17.79■□□□□ 0.44
Polr1e-203ENSMUST00000107814 Arhgap35Q91YM2 1499 aa17.78■□□□□ 0.44
Polr1e-203ENSMUST00000107814 AqrQ8CFQ3 1481 aaKnown RBP17.77■□□□□ 0.43
Polr1e-203ENSMUST00000107814 Npm2Q80W85 207 aa17.75■□□□□ 0.43
Polr1e-203ENSMUST00000107814 Gab3Q8BSM5 595 aa17.75■□□□□ 0.43
Polr1e-203ENSMUST00000107814 Cep162Q6ZQ06 1403 aa17.74■□□□□ 0.43
Polr1e-203ENSMUST00000107814 Adamts12Q811B3 1600 aa17.67■□□□□ 0.42
Polr1e-203ENSMUST00000107814 Carmil1Q6EDY6 1374 aa17.67■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms