RNA–Protein interactions for RNA: ENSMUST00000106549.8

Knop1-203, Transcript of Lysine-rich nucleolar protein 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Knop1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Knop1-203ENSMUST00000106549 Gm35339A0A140LHH9 1649 aa30.39■■■□□ 2.46
Knop1-203ENSMUST00000106549 NischQ80TM9 1593 aa30.08■■■□□ 2.41
Knop1-203ENSMUST00000106549 Abcc9P70170 1546 aa29.16■■■□□ 2.26
Knop1-203ENSMUST00000106549 Abcc8B2RUS7 1588 aa29■■■□□ 2.23
Knop1-203ENSMUST00000106549 ScribQ80U72 1612 aa27.83■■■□□ 2.05
Knop1-203ENSMUST00000106549 NacadQ5SWP3 1504 aa26.96■■□□□ 1.91
Knop1-203ENSMUST00000106549 Kdm5dQ62240 1548 aa26.96■■□□□ 1.91
Knop1-203ENSMUST00000106549 Dcaf1Q80TR8 1506 aa26.78■■□□□ 1.88
Knop1-203ENSMUST00000106549 Sycp2Q9CUU3 1500 aa26.42■■□□□ 1.82
Knop1-203ENSMUST00000106549 Rb1cc1Q9ESK9 1588 aa26.27■■□□□ 1.8
Knop1-203ENSMUST00000106549 Rhox8Q6VSS7 320 aa26.23■■□□□ 1.79
Knop1-203ENSMUST00000106549 BicraF8VPZ9 1578 aa26.02■■□□□ 1.76
Knop1-203ENSMUST00000106549 Ccdc180J3QNE4 1664 aa25.96■■□□□ 1.75
Knop1-203ENSMUST00000106549 Baz1aO88379 1555 aa25.91■■□□□ 1.74
Knop1-203ENSMUST00000106549 Crybg2B7ZCC2 1516 aa25.74■■□□□ 1.71
Knop1-203ENSMUST00000106549 Zcchc6Q5BLK4 1491 aaKnown RBP25.47■■□□□ 1.67
Knop1-203ENSMUST00000106549 Pds5bQ4VA53 1446 aaKnown RBP25.23■■□□□ 1.63
Knop1-203ENSMUST00000106549 Smarca2Q6DIC0 1577 aa25.18■■□□□ 1.62
Knop1-203ENSMUST00000106549 Rtl1Q7M732 1744 aa25.08■■□□□ 1.6
Knop1-203ENSMUST00000106549 Atad2bE9Q166 1460 aaKnown RBP25.05■■□□□ 1.6
Knop1-203ENSMUST00000106549 Smarca4Q3TKT4 1613 aaKnown RBP24.97■■□□□ 1.59
Knop1-203ENSMUST00000106549 Cecr2E9Q2Z1 1453 aa24.95■■□□□ 1.58
Knop1-203ENSMUST00000106549 Thoc2B1AZI6 1594 aaKnown RBP24.94■■□□□ 1.58
Knop1-203ENSMUST00000106549 Dnajc5bQ9CQ94 199 aa24.83■■□□□ 1.57
Knop1-203ENSMUST00000106549 Iqgap2Q3UQ44 1575 aa24.8■■□□□ 1.56
Knop1-203ENSMUST00000106549 Ercc6F8VPZ5 1481 aa24.73■■□□□ 1.55
Knop1-203ENSMUST00000106549 Cc2d2aQ8CFW7 1633 aa24.55■■□□□ 1.52
Knop1-203ENSMUST00000106549 Wdr62Q3U3T8 1523 aa24.54■■□□□ 1.52
Knop1-203ENSMUST00000106549 Ccdc136Q3TVA9 1136 aa24.49■■□□□ 1.51
Knop1-203ENSMUST00000106549 Frmpd1A2AKB4 1549 aa24.49■■□□□ 1.51
Knop1-203ENSMUST00000106549 Brd4Q9ESU6 1400 aaKnown RBP24.48■■□□□ 1.51
Knop1-203ENSMUST00000106549 Cttnbp2B9EJA2 1648 aa24.46■■□□□ 1.51
Knop1-203ENSMUST00000106549 CftrP26361 1476 aa24.45■■□□□ 1.5
Knop1-203ENSMUST00000106549 Synj1Q8CHC4 1574 aa24.44■■□□□ 1.5
Knop1-203ENSMUST00000106549 Fam135aQ6NS59 1506 aa24.43■■□□□ 1.5
Knop1-203ENSMUST00000106549 Phldb1Q6PDH0 1371 aaKnown RBP24.28■■□□□ 1.48
Knop1-203ENSMUST00000106549 Unc13aQ4KUS2 1712 aa24.21■■□□□ 1.47
Knop1-203ENSMUST00000106549 Baz1bQ9Z277 1479 aa24.16■■□□□ 1.46
Knop1-203ENSMUST00000106549 Trim41Q5NCC3 630 aa24.13■■□□□ 1.45
Knop1-203ENSMUST00000106549 Esf1Q3V1V3 845 aaKnown RBP24.02■■□□□ 1.44
Knop1-203ENSMUST00000106549 Ubl4bQ9CQ84 188 aa24.01■■□□□ 1.43
Knop1-203ENSMUST00000106549 Mrc2Q64449 1479 aa23.86■■□□□ 1.41
Knop1-203ENSMUST00000106549 Rsf1E9PWW9 1441 aaKnown RBP23.78■■□□□ 1.4
Knop1-203ENSMUST00000106549 Kif15Q6P9L6 1387 aa23.7■■□□□ 1.38
Knop1-203ENSMUST00000106549 Golga3P55937 1487 aa23.7■■□□□ 1.38
Knop1-203ENSMUST00000106549 Lamc3Q9R0B6 1581 aa23.69■■□□□ 1.38
Knop1-203ENSMUST00000106549 Top2bQ64511 1612 aa23.67■■□□□ 1.38
Knop1-203ENSMUST00000106549 Cux2P70298 1426 aa23.63■■□□□ 1.37
Knop1-203ENSMUST00000106549 Cngb1E1AZ71 1325 aa23.58■■□□□ 1.37
Knop1-203ENSMUST00000106549 TnnQ80Z71 1560 aa23.52■■□□□ 1.36
Knop1-203ENSMUST00000106549 Kif21aQ9QXL2 1672 aa23.42■■□□□ 1.34
Knop1-203ENSMUST00000106549 Fmn1Q05860 1466 aa23.39■■□□□ 1.34
Knop1-203ENSMUST00000106549 Npm1Q61937 292 aaKnown RBP23.38■■□□□ 1.33
Knop1-203ENSMUST00000106549 Ccdc18Q640L5 1455 aa23.35■■□□□ 1.33
Knop1-203ENSMUST00000106549 Cep164Q5DU05 1446 aa23.35■■□□□ 1.33
Knop1-203ENSMUST00000106549 Lrriq1Q0P5X1 1673 aa23.33■■□□□ 1.33
Knop1-203ENSMUST00000106549 Camsap1A2AHC3 1581 aa23.31■■□□□ 1.32
Knop1-203ENSMUST00000106549 Il27Q8K3I6 234 aa23.24■■□□□ 1.31
Knop1-203ENSMUST00000106549 LrpprcQ6PB66 1392 aaKnown RBP23.16■■□□□ 1.3
Knop1-203ENSMUST00000106549 Dhx29Q6PGC1 1365 aaKnown RBP23.15■■□□□ 1.3
Knop1-203ENSMUST00000106549 Ccdc88bQ4QRL3 1481 aa23.13■■□□□ 1.29
Knop1-203ENSMUST00000106549 Crocc2F6XLV1 1638 aa23.07■■□□□ 1.28
Knop1-203ENSMUST00000106549 PogzQ8BZH4 1409 aaKnown RBP23.05■■□□□ 1.28
Knop1-203ENSMUST00000106549 Urb2E9Q7L1 1524 aaKnown RBP23.03■■□□□ 1.28
Knop1-203ENSMUST00000106549 Eif4g3Q80XI3 1579 aaKnown RBP23.01■■□□□ 1.27
Knop1-203ENSMUST00000106549 Plb1Q3TTY0 1478 aa23.01■■□□□ 1.27
Knop1-203ENSMUST00000106549 Top2aQ01320 1528 aaKnown RBP23■■□□□ 1.27
Knop1-203ENSMUST00000106549 Grin2bQ01097 1482 aa23■■□□□ 1.27
Knop1-203ENSMUST00000106549 Chic1Q8CBW7 227 aa22.95■■□□□ 1.26
Knop1-203ENSMUST00000106549 Duox2A2AQ99 1517 aa22.95■■□□□ 1.26
Knop1-203ENSMUST00000106549 Ift140E9PY46 1464 aa22.85■■□□□ 1.25
Knop1-203ENSMUST00000106549 Efcab5A0JP43 1406 aa22.82■■□□□ 1.24
Knop1-203ENSMUST00000106549 NrkQ9R0G8 1455 aa22.81■■□□□ 1.24
Knop1-203ENSMUST00000106549 Samd9lQ69Z37 1561 aa22.8■■□□□ 1.24
Knop1-203ENSMUST00000106549 HrcG5E8J6 738 aa22.77■■□□□ 1.24
Knop1-203ENSMUST00000106549 Shroom4Q1W617 1475 aa22.73■■□□□ 1.23
Knop1-203ENSMUST00000106549 Rusc2Q80U22 1514 aa22.73■■□□□ 1.23
Knop1-203ENSMUST00000106549 Disp1Q3TDN0 1521 aa22.7■■□□□ 1.22
Knop1-203ENSMUST00000106549 Pbrm1Q8BSQ9 1634 aaKnown RBP22.69■■□□□ 1.22
Knop1-203ENSMUST00000106549 PtprkP35822 1457 aa22.68■■□□□ 1.22
Knop1-203ENSMUST00000106549 Setd1bQ8CFT2 1985 aa22.63■■□□□ 1.21
Knop1-203ENSMUST00000106549 Nup160Q9Z0W3 1402 aaKnown RBP22.61■■□□□ 1.21
Knop1-203ENSMUST00000106549 Rad54l2Q99NG0 1466 aa22.61■■□□□ 1.21
Knop1-203ENSMUST00000106549 Cc2d2bA0A286YDU8 1405 aa22.56■■□□□ 1.2
Knop1-203ENSMUST00000106549 Grin2aP35436 1464 aa22.55■■□□□ 1.2
Knop1-203ENSMUST00000106549 Magi3Q9EQJ9 1476 aa22.55■■□□□ 1.2
Knop1-203ENSMUST00000106549 SynmQ70IV5 1561 aa22.54■■□□□ 1.2
Knop1-203ENSMUST00000106549 Shroom2A2ALU4 1481 aa22.54■■□□□ 1.2
Knop1-203ENSMUST00000106549 Npm2Q80W85 207 aa22.48■■□□□ 1.19
Knop1-203ENSMUST00000106549 Zeb1Q64318 1117 aa22.47■■□□□ 1.19
Knop1-203ENSMUST00000106549 Gpatch8A2A6A1 1505 aa22.46■■□□□ 1.19
Knop1-203ENSMUST00000106549 Pla2r1Q62028 1487 aa22.45■■□□□ 1.18
Knop1-203ENSMUST00000106549 Gab3Q8BSM5 595 aa22.45■■□□□ 1.18
Knop1-203ENSMUST00000106549 AqrQ8CFQ3 1481 aaKnown RBP22.44■■□□□ 1.18
Knop1-203ENSMUST00000106549 Mroh2bQ7M6Y6 1581 aa22.42■■□□□ 1.18
Knop1-203ENSMUST00000106549 Rapgef2Q8CHG7 1496 aa22.4■■□□□ 1.18
Knop1-203ENSMUST00000106549 Pabpn1Q8CCS6 302 aaKnown RBP22.33■■□□□ 1.16
Knop1-203ENSMUST00000106549 Arhgap35Q91YM2 1499 aa22.31■■□□□ 1.16
Knop1-203ENSMUST00000106549 Map3k1P53349 1493 aa22.3■■□□□ 1.16
Knop1-203ENSMUST00000106549 Eif4g1Q6NZJ6 1600 aaKnown RBP22.27■■□□□ 1.16
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms