RNA–Protein interactions for RNA: ENSMUST00000105297.1

Nr1h4-203, Transcript of Bile acid receptor, mousemouse

TSL 1 (best) BASIC

Gene Nr1h4, Length 2,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4-203ENSMUST00000105297 NischQ80TM9 1593 aa22.71■■□□□ 1.23
Nr1h4-203ENSMUST00000105297 Gm35339A0A140LHH9 1649 aa22.65■■□□□ 1.22
Nr1h4-203ENSMUST00000105297 Abcc9P70170 1546 aa22■■□□□ 1.11
Nr1h4-203ENSMUST00000105297 Abcc8B2RUS7 1588 aa21.73■■□□□ 1.07
Nr1h4-203ENSMUST00000105297 ScribQ80U72 1612 aa20.59■□□□□ 0.89
Nr1h4-203ENSMUST00000105297 Rhox8Q6VSS7 320 aa20.37■□□□□ 0.85
Nr1h4-203ENSMUST00000105297 Dcaf1Q80TR8 1506 aa20.18■□□□□ 0.82
Nr1h4-203ENSMUST00000105297 Kdm5dQ62240 1548 aa20.09■□□□□ 0.81
Nr1h4-203ENSMUST00000105297 NacadQ5SWP3 1504 aa20.06■□□□□ 0.8
Nr1h4-203ENSMUST00000105297 Rb1cc1Q9ESK9 1588 aa19.85■□□□□ 0.77
Nr1h4-203ENSMUST00000105297 Ccdc180J3QNE4 1664 aa19.63■□□□□ 0.73
Nr1h4-203ENSMUST00000105297 Sycp2Q9CUU3 1500 aa19.62■□□□□ 0.73
Nr1h4-203ENSMUST00000105297 Baz1aO88379 1555 aa19.6■□□□□ 0.73
Nr1h4-203ENSMUST00000105297 Rtl1Q7M732 1744 aa19.44■□□□□ 0.7
Nr1h4-203ENSMUST00000105297 Crybg2B7ZCC2 1516 aa19.4■□□□□ 0.7
Nr1h4-203ENSMUST00000105297 Zcchc6Q5BLK4 1491 aaKnown RBP19.28■□□□□ 0.68
Nr1h4-203ENSMUST00000105297 BicraF8VPZ9 1578 aa19.23■□□□□ 0.67
Nr1h4-203ENSMUST00000105297 Smarca2Q6DIC0 1577 aa19.07■□□□□ 0.64
Nr1h4-203ENSMUST00000105297 Ccdc136Q3TVA9 1136 aa18.94■□□□□ 0.62
Nr1h4-203ENSMUST00000105297 Cecr2E9Q2Z1 1453 aa18.77■□□□□ 0.6
Nr1h4-203ENSMUST00000105297 Trim41Q5NCC3 630 aa18.66■□□□□ 0.58
Nr1h4-203ENSMUST00000105297 Smarca4Q3TKT4 1613 aaKnown RBP18.65■□□□□ 0.58
Nr1h4-203ENSMUST00000105297 Brd4Q9ESU6 1400 aaKnown RBP18.64■□□□□ 0.57
Nr1h4-203ENSMUST00000105297 Pds5bQ4VA53 1446 aaKnown RBP18.63■□□□□ 0.57
Nr1h4-203ENSMUST00000105297 Atad2bE9Q166 1460 aaKnown RBP18.56■□□□□ 0.56
Nr1h4-203ENSMUST00000105297 Synj1Q8CHC4 1574 aa18.49■□□□□ 0.55
Nr1h4-203ENSMUST00000105297 CftrP26361 1476 aa18.47■□□□□ 0.55
Nr1h4-203ENSMUST00000105297 Iqgap2Q3UQ44 1575 aa18.47■□□□□ 0.55
Nr1h4-203ENSMUST00000105297 Cttnbp2B9EJA2 1648 aa18.44■□□□□ 0.54
Nr1h4-203ENSMUST00000105297 Esf1Q3V1V3 845 aaKnown RBP18.34■□□□□ 0.53
Nr1h4-203ENSMUST00000105297 Ercc6F8VPZ5 1481 aa18.29■□□□□ 0.52
Nr1h4-203ENSMUST00000105297 Cngb1E1AZ71 1325 aa18.21■□□□□ 0.51
Nr1h4-203ENSMUST00000105297 Wdr62Q3U3T8 1523 aa18.2■□□□□ 0.5
Nr1h4-203ENSMUST00000105297 Thoc2B1AZI6 1594 aaKnown RBP18.19■□□□□ 0.5
Nr1h4-203ENSMUST00000105297 Golga3P55937 1487 aa18.17■□□□□ 0.5
Nr1h4-203ENSMUST00000105297 Frmpd1A2AKB4 1549 aa18.17■□□□□ 0.5
Nr1h4-203ENSMUST00000105297 HrcG5E8J6 738 aa18.12■□□□□ 0.49
Nr1h4-203ENSMUST00000105297 Top2bQ64511 1612 aa18.03■□□□□ 0.48
Nr1h4-203ENSMUST00000105297 Cc2d2aQ8CFW7 1633 aa17.98■□□□□ 0.47
Nr1h4-203ENSMUST00000105297 Phldb1Q6PDH0 1371 aaKnown RBP17.97■□□□□ 0.47
Nr1h4-203ENSMUST00000105297 Unc13aQ4KUS2 1712 aa17.94■□□□□ 0.46
Nr1h4-203ENSMUST00000105297 Fam135aQ6NS59 1506 aa17.91■□□□□ 0.46
Nr1h4-203ENSMUST00000105297 Rsf1E9PWW9 1441 aaKnown RBP17.87■□□□□ 0.45
Nr1h4-203ENSMUST00000105297 Dnajc5bQ9CQ94 199 aa17.86■□□□□ 0.45
Nr1h4-203ENSMUST00000105297 Fmn1Q05860 1466 aa17.85■□□□□ 0.45
Nr1h4-203ENSMUST00000105297 Ubl4bQ9CQ84 188 aa17.84■□□□□ 0.45
Nr1h4-203ENSMUST00000105297 Ccdc88bQ4QRL3 1481 aa17.84■□□□□ 0.45
Nr1h4-203ENSMUST00000105297 Cep164Q5DU05 1446 aa17.82■□□□□ 0.44
Nr1h4-203ENSMUST00000105297 Chic1Q8CBW7 227 aa17.82■□□□□ 0.44
Nr1h4-203ENSMUST00000105297 Kif15Q6P9L6 1387 aa17.8■□□□□ 0.44
Nr1h4-203ENSMUST00000105297 Lamc3Q9R0B6 1581 aa17.77■□□□□ 0.44
Nr1h4-203ENSMUST00000105297 TnnQ80Z71 1560 aa17.73■□□□□ 0.43
Nr1h4-203ENSMUST00000105297 Baz1bQ9Z277 1479 aa17.72■□□□□ 0.43
Nr1h4-203ENSMUST00000105297 Cux2P70298 1426 aa17.63■□□□□ 0.41
Nr1h4-203ENSMUST00000105297 Top2aQ01320 1528 aaKnown RBP17.61■□□□□ 0.41
Nr1h4-203ENSMUST00000105297 Ccdc18Q640L5 1455 aa17.6■□□□□ 0.41
Nr1h4-203ENSMUST00000105297 Il27Q8K3I6 234 aa17.59■□□□□ 0.41
Nr1h4-203ENSMUST00000105297 Gab3Q8BSM5 595 aa17.57■□□□□ 0.4
Nr1h4-203ENSMUST00000105297 Npm1Q61937 292 aaKnown RBP17.55■□□□□ 0.4
Nr1h4-203ENSMUST00000105297 Mrc2Q64449 1479 aa17.55■□□□□ 0.4
Nr1h4-203ENSMUST00000105297 Camsap1A2AHC3 1581 aa17.54■□□□□ 0.4
Nr1h4-203ENSMUST00000105297 LrpprcQ6PB66 1392 aaKnown RBP17.38■□□□□ 0.37
Nr1h4-203ENSMUST00000105297 Npm2Q80W85 207 aa17.38■□□□□ 0.37
Nr1h4-203ENSMUST00000105297 Grin2bQ01097 1482 aa17.37■□□□□ 0.37
Nr1h4-203ENSMUST00000105297 Rapgef2Q8CHG7 1496 aa17.33■□□□□ 0.37
Nr1h4-203ENSMUST00000105297 NrkQ9R0G8 1455 aa17.33■□□□□ 0.37
Nr1h4-203ENSMUST00000105297 Kif21aQ9QXL2 1672 aa17.33■□□□□ 0.36
Nr1h4-203ENSMUST00000105297 PogzQ8BZH4 1409 aaKnown RBP17.3■□□□□ 0.36
Nr1h4-203ENSMUST00000105297 Dhx29Q6PGC1 1365 aaKnown RBP17.3■□□□□ 0.36
Nr1h4-203ENSMUST00000105297 Shroom4Q1W617 1475 aa17.29■□□□□ 0.36
Nr1h4-203ENSMUST00000105297 PtprkP35822 1457 aa17.26■□□□□ 0.35
Nr1h4-203ENSMUST00000105297 Duox2A2AQ99 1517 aa17.25■□□□□ 0.35
Nr1h4-203ENSMUST00000105297 Efcab5A0JP43 1406 aa17.24■□□□□ 0.35
Nr1h4-203ENSMUST00000105297 Cep162Q6ZQ06 1403 aa17.22■□□□□ 0.35
Nr1h4-203ENSMUST00000105297 Crocc2F6XLV1 1638 aa17.22■□□□□ 0.35
Nr1h4-203ENSMUST00000105297 Zeb1Q64318 1117 aa17.2■□□□□ 0.34
Nr1h4-203ENSMUST00000105297 Myt1lP97500 1187 aa17.18■□□□□ 0.34
Nr1h4-203ENSMUST00000105297 Eif4g1Q6NZJ6 1600 aaKnown RBP17.11■□□□□ 0.33
Nr1h4-203ENSMUST00000105297 Arhgap35Q91YM2 1499 aa17.11■□□□□ 0.33
Nr1h4-203ENSMUST00000105297 Plb1Q3TTY0 1478 aa17.11■□□□□ 0.33
Nr1h4-203ENSMUST00000105297 Lrriq1Q0P5X1 1673 aa17.11■□□□□ 0.33
Nr1h4-203ENSMUST00000105297 Samd9lQ69Z37 1561 aa17.1■□□□□ 0.33
Nr1h4-203ENSMUST00000105297 Mroh2bQ7M6Y6 1581 aa17.09■□□□□ 0.33
Nr1h4-203ENSMUST00000105297 Map3k1P53349 1493 aa17.07■□□□□ 0.32
Nr1h4-203ENSMUST00000105297 Urb2E9Q7L1 1524 aaKnown RBP17.07■□□□□ 0.32
Nr1h4-203ENSMUST00000105297 SynmQ70IV5 1561 aa17.01■□□□□ 0.31
Nr1h4-203ENSMUST00000105297 Rad54l2Q99NG0 1466 aa17■□□□□ 0.31
Nr1h4-203ENSMUST00000105297 Clip1Q922J3 1391 aa17■□□□□ 0.31
Nr1h4-203ENSMUST00000105297 Ift140E9PY46 1464 aa17■□□□□ 0.31
Nr1h4-203ENSMUST00000105297 AqrQ8CFQ3 1481 aaKnown RBP16.96■□□□□ 0.31
Nr1h4-203ENSMUST00000105297 Ehmt2Q9Z148 1263 aaKnown RBP16.96■□□□□ 0.3
Nr1h4-203ENSMUST00000105297 Carmil1Q6EDY6 1374 aa16.95■□□□□ 0.3
Nr1h4-203ENSMUST00000105297 Disp1Q3TDN0 1521 aa16.95■□□□□ 0.3
Nr1h4-203ENSMUST00000105297 Grin2aP35436 1464 aa16.91■□□□□ 0.3
Nr1h4-203ENSMUST00000105297 Magi3Q9EQJ9 1476 aa16.89■□□□□ 0.29
Nr1h4-203ENSMUST00000105297 Pbrm1Q8BSQ9 1634 aaKnown RBP16.89■□□□□ 0.29
Nr1h4-203ENSMUST00000105297 Pla2r1Q62028 1487 aa16.87■□□□□ 0.29
Nr1h4-203ENSMUST00000105297 Eea1Q8BL66 1411 aa16.86■□□□□ 0.29
Nr1h4-203ENSMUST00000105297 Eif4g3Q80XI3 1579 aaKnown RBP16.86■□□□□ 0.29
Nr1h4-203ENSMUST00000105297 Nup160Q9Z0W3 1402 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 19.8 ms