RNA–Protein interactions for RNA: ENSMUST00000098443.8

Cpne4-203, Transcript of Copine-4, mousemouse

TSL 1 (best) BASIC

Gene Cpne4, Length 1,421 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne4-203ENSMUST00000098443 Gm35339A0A140LHH9 1649 aa16.92■□□□□ 0.3
Cpne4-203ENSMUST00000098443 Chic1Q8CBW7 227 aa16.87■□□□□ 0.29
Cpne4-203ENSMUST00000098443 NischQ80TM9 1593 aa16.77■□□□□ 0.27
Cpne4-203ENSMUST00000098443 Mapk8ip2Q9ERE9 830 aa16.47■□□□□ 0.23
Cpne4-203ENSMUST00000098443 Abcc9P70170 1546 aa16.25■□□□□ 0.19
Cpne4-203ENSMUST00000098443 Abcc8B2RUS7 1588 aa16.16■□□□□ 0.18
Cpne4-203ENSMUST00000098443 ScribQ80U72 1612 aa15.48■□□□□ 0.07
Cpne4-203ENSMUST00000098443 Phf23Q8BSN5 401 aa15.08■□□□□ 0
Cpne4-203ENSMUST00000098443 NacadQ5SWP3 1504 aa15.06■□□□□ 0
Cpne4-203ENSMUST00000098443 Kdm5dQ62240 1548 aa15.04■□□□□ -0
Cpne4-203ENSMUST00000098443 Dcaf1Q80TR8 1506 aa14.94□□□□□ -0.02
Cpne4-203ENSMUST00000098443 Sycp2Q9CUU3 1500 aa14.74□□□□□ -0.05
Cpne4-203ENSMUST00000098443 Rhox8Q6VSS7 320 aa14.65□□□□□ -0.06
Cpne4-203ENSMUST00000098443 Rb1cc1Q9ESK9 1588 aa14.65□□□□□ -0.06
Cpne4-203ENSMUST00000098443 Plppr3Q7TPB0 716 aa14.54□□□□□ -0.08
Cpne4-203ENSMUST00000098443 BicraF8VPZ9 1578 aa14.48□□□□□ -0.09
Cpne4-203ENSMUST00000098443 Gab3Q8BSM5 595 aa14.46□□□□□ -0.09
Cpne4-203ENSMUST00000098443 Ccdc180J3QNE4 1664 aa14.45□□□□□ -0.1
Cpne4-203ENSMUST00000098443 Baz1aO88379 1555 aa14.44□□□□□ -0.1
Cpne4-203ENSMUST00000098443 Crybg2B7ZCC2 1516 aa14.36□□□□□ -0.11
Cpne4-203ENSMUST00000098443 Zcchc6Q5BLK4 1491 aaKnown RBP14.22□□□□□ -0.13
Cpne4-203ENSMUST00000098443 Pds5bQ4VA53 1446 aaKnown RBP14.12□□□□□ -0.15
Cpne4-203ENSMUST00000098443 Rtl1Q7M732 1744 aa14.11□□□□□ -0.15
Cpne4-203ENSMUST00000098443 Smarca2Q6DIC0 1577 aa14.02□□□□□ -0.16
Cpne4-203ENSMUST00000098443 Atad2bE9Q166 1460 aaKnown RBP14□□□□□ -0.17
Cpne4-203ENSMUST00000098443 Smarca4Q3TKT4 1613 aaKnown RBP13.94□□□□□ -0.18
Cpne4-203ENSMUST00000098443 Thoc2B1AZI6 1594 aaKnown RBP13.92□□□□□ -0.18
Cpne4-203ENSMUST00000098443 Cecr2E9Q2Z1 1453 aa13.88□□□□□ -0.19
Cpne4-203ENSMUST00000098443 Ercc6F8VPZ5 1481 aa13.85□□□□□ -0.19
Cpne4-203ENSMUST00000098443 Iqgap2Q3UQ44 1575 aa13.84□□□□□ -0.19
Cpne4-203ENSMUST00000098443 Dnajc5bQ9CQ94 199 aa13.83□□□□□ -0.2
Cpne4-203ENSMUST00000098443 Senp3Q9EP97 568 aaKnown RBP13.81□□□□□ -0.2
Cpne4-203ENSMUST00000098443 Wdr62Q3U3T8 1523 aa13.7□□□□□ -0.22
Cpne4-203ENSMUST00000098443 Cc2d2aQ8CFW7 1633 aa13.7□□□□□ -0.22
Cpne4-203ENSMUST00000098443 Brd4Q9ESU6 1400 aaKnown RBP13.67□□□□□ -0.22
Cpne4-203ENSMUST00000098443 Ccdc136Q3TVA9 1136 aa13.65□□□□□ -0.22
Cpne4-203ENSMUST00000098443 Frmpd1A2AKB4 1549 aa13.65□□□□□ -0.22
Cpne4-203ENSMUST00000098443 Fam135aQ6NS59 1506 aa13.64□□□□□ -0.23
Cpne4-203ENSMUST00000098443 Cttnbp2B9EJA2 1648 aa13.64□□□□□ -0.23
Cpne4-203ENSMUST00000098443 CftrP26361 1476 aa13.63□□□□□ -0.23
Cpne4-203ENSMUST00000098443 Synj1Q8CHC4 1574 aa13.61□□□□□ -0.23
Cpne4-203ENSMUST00000098443 Phldb1Q6PDH0 1371 aaKnown RBP13.58□□□□□ -0.24
Cpne4-203ENSMUST00000098443 Baz1bQ9Z277 1479 aa13.55□□□□□ -0.24
Cpne4-203ENSMUST00000098443 Trim41Q5NCC3 630 aa13.49□□□□□ -0.25
Cpne4-203ENSMUST00000098443 Esf1Q3V1V3 845 aaKnown RBP13.44□□□□□ -0.26
Cpne4-203ENSMUST00000098443 Ubl4bQ9CQ84 188 aa13.44□□□□□ -0.26
Cpne4-203ENSMUST00000098443 Unc13aQ4KUS2 1712 aa13.44□□□□□ -0.26
Cpne4-203ENSMUST00000098443 Mrc2Q64449 1479 aa13.34□□□□□ -0.27
Cpne4-203ENSMUST00000098443 Rsf1E9PWW9 1441 aaKnown RBP13.3□□□□□ -0.28
Cpne4-203ENSMUST00000098443 Kif15Q6P9L6 1387 aa13.25□□□□□ -0.29
Cpne4-203ENSMUST00000098443 Golga3P55937 1487 aa13.22□□□□□ -0.29
Cpne4-203ENSMUST00000098443 Lamc3Q9R0B6 1581 aa13.21□□□□□ -0.29
Cpne4-203ENSMUST00000098443 Cux2P70298 1426 aa13.2□□□□□ -0.3
Cpne4-203ENSMUST00000098443 Kcna4Q61423 654 aa13.19□□□□□ -0.3
Cpne4-203ENSMUST00000098443 Cngb1E1AZ71 1325 aa13.18□□□□□ -0.3
Cpne4-203ENSMUST00000098443 Top2bQ64511 1612 aa13.16□□□□□ -0.3
Cpne4-203ENSMUST00000098443 TnnQ80Z71 1560 aa13.1□□□□□ -0.31
Cpne4-203ENSMUST00000098443 Npm1Q61937 292 aaKnown RBP13.09□□□□□ -0.31
Cpne4-203ENSMUST00000098443 Cep164Q5DU05 1446 aa13.07□□□□□ -0.32
Cpne4-203ENSMUST00000098443 Fmn1Q05860 1466 aa13.06□□□□□ -0.32
Cpne4-203ENSMUST00000098443 Ccdc18Q640L5 1455 aa13.06□□□□□ -0.32
Cpne4-203ENSMUST00000098443 Kif21aQ9QXL2 1672 aa13.05□□□□□ -0.32
Cpne4-203ENSMUST00000098443 Lrriq1Q0P5X1 1673 aa13.02□□□□□ -0.33
Cpne4-203ENSMUST00000098443 Camsap1A2AHC3 1581 aa12.99□□□□□ -0.33
Cpne4-203ENSMUST00000098443 HrcG5E8J6 738 aa12.98□□□□□ -0.33
Cpne4-203ENSMUST00000098443 Il27Q8K3I6 234 aa12.98□□□□□ -0.33
Cpne4-203ENSMUST00000098443 LrpprcQ6PB66 1392 aaKnown RBP12.93□□□□□ -0.34
Cpne4-203ENSMUST00000098443 Dhx29Q6PGC1 1365 aaKnown RBP12.93□□□□□ -0.34
Cpne4-203ENSMUST00000098443 Crocc2F6XLV1 1638 aa12.88□□□□□ -0.35
Cpne4-203ENSMUST00000098443 PogzQ8BZH4 1409 aaKnown RBP12.86□□□□□ -0.35
Cpne4-203ENSMUST00000098443 Eif4g3Q80XI3 1579 aaKnown RBP12.86□□□□□ -0.35
Cpne4-203ENSMUST00000098443 Ccdc88bQ4QRL3 1481 aa12.85□□□□□ -0.35
Cpne4-203ENSMUST00000098443 Urb2E9Q7L1 1524 aaKnown RBP12.85□□□□□ -0.35
Cpne4-203ENSMUST00000098443 Plb1Q3TTY0 1478 aa12.85□□□□□ -0.35
Cpne4-203ENSMUST00000098443 Grin2bQ01097 1482 aa12.83□□□□□ -0.36
Cpne4-203ENSMUST00000098443 Top2aQ01320 1528 aaKnown RBP12.81□□□□□ -0.36
Cpne4-203ENSMUST00000098443 Duox2A2AQ99 1517 aa12.81□□□□□ -0.36
Cpne4-203ENSMUST00000098443 Fam163aQ8CAA5 168 aa12.79□□□□□ -0.36
Cpne4-203ENSMUST00000098443 Ift140E9PY46 1464 aa12.78□□□□□ -0.36
Cpne4-203ENSMUST00000098443 Efcab5A0JP43 1406 aa12.74□□□□□ -0.37
Cpne4-203ENSMUST00000098443 GapdhsQ64467 440 aa12.73□□□□□ -0.37
Cpne4-203ENSMUST00000098443 NrkQ9R0G8 1455 aa12.73□□□□□ -0.37
Cpne4-203ENSMUST00000098443 Rusc2Q80U22 1514 aa12.7□□□□□ -0.38
Cpne4-203ENSMUST00000098443 Samd9lQ69Z37 1561 aa12.7□□□□□ -0.38
Cpne4-203ENSMUST00000098443 Shroom4Q1W617 1475 aa12.68□□□□□ -0.38
Cpne4-203ENSMUST00000098443 Pbrm1Q8BSQ9 1634 aaKnown RBP12.67□□□□□ -0.38
Cpne4-203ENSMUST00000098443 Disp1Q3TDN0 1521 aa12.66□□□□□ -0.38
Cpne4-203ENSMUST00000098443 Nup160Q9Z0W3 1402 aaKnown RBP12.62□□□□□ -0.39
Cpne4-203ENSMUST00000098443 Cc2d2bA0A286YDU8 1405 aa12.62□□□□□ -0.39
Cpne4-203ENSMUST00000098443 Shroom2A2ALU4 1481 aa12.61□□□□□ -0.39
Cpne4-203ENSMUST00000098443 PtprkP35822 1457 aa12.61□□□□□ -0.39
Cpne4-203ENSMUST00000098443 Rad54l2Q99NG0 1466 aa12.6□□□□□ -0.39
Cpne4-203ENSMUST00000098443 Zeb1Q64318 1117 aa12.59□□□□□ -0.39
Cpne4-203ENSMUST00000098443 Grin2aP35436 1464 aa12.58□□□□□ -0.4
Cpne4-203ENSMUST00000098443 Npm2Q80W85 207 aa12.58□□□□□ -0.4
Cpne4-203ENSMUST00000098443 Magi3Q9EQJ9 1476 aa12.58□□□□□ -0.4
Cpne4-203ENSMUST00000098443 SynmQ70IV5 1561 aa12.57□□□□□ -0.4
Cpne4-203ENSMUST00000098443 AqrQ8CFQ3 1481 aaKnown RBP12.54□□□□□ -0.4
Cpne4-203ENSMUST00000098443 Gpatch8A2A6A1 1505 aa12.53□□□□□ -0.4
Cpne4-203ENSMUST00000098443 Pla2r1Q62028 1487 aa12.52□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 10.4 ms