RNA–Protein interactions for RNA: ENSMUST00000058626.8

Pdlim5-202, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 5 BASIC

Gene Pdlim5, Length 873 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-202ENSMUST00000058626 Gm35339A0A140LHH9 1649 aa41.17■■■■■ 4.18
Pdlim5-202ENSMUST00000058626 NischQ80TM9 1593 aa40.75■■■■■ 4.11
Pdlim5-202ENSMUST00000058626 Abcc9P70170 1546 aa39.47■■■■□ 3.91
Pdlim5-202ENSMUST00000058626 Abcc8B2RUS7 1588 aa39.31■■■■□ 3.88
Pdlim5-202ENSMUST00000058626 ScribQ80U72 1612 aa37.69■■■■□ 3.62
Pdlim5-202ENSMUST00000058626 NacadQ5SWP3 1504 aa36.63■■■■□ 3.45
Pdlim5-202ENSMUST00000058626 Kdm5dQ62240 1548 aa36.56■■■■□ 3.44
Pdlim5-202ENSMUST00000058626 Dcaf1Q80TR8 1506 aa36.33■■■■□ 3.41
Pdlim5-202ENSMUST00000058626 Sycp2Q9CUU3 1500 aa35.88■■■■□ 3.33
Pdlim5-202ENSMUST00000058626 Rb1cc1Q9ESK9 1588 aa35.55■■■■□ 3.28
Pdlim5-202ENSMUST00000058626 Rhox8Q6VSS7 320 aa35.51■■■■□ 3.28
Pdlim5-202ENSMUST00000058626 BicraF8VPZ9 1578 aa35.28■■■■□ 3.24
Pdlim5-202ENSMUST00000058626 Ccdc180J3QNE4 1664 aa35.14■■■■□ 3.22
Pdlim5-202ENSMUST00000058626 Baz1aO88379 1555 aa35.08■■■■□ 3.21
Pdlim5-202ENSMUST00000058626 Crybg2B7ZCC2 1516 aa34.95■■■■□ 3.19
Pdlim5-202ENSMUST00000058626 Zcchc6Q5BLK4 1491 aaKnown RBP34.52■■■■□ 3.12
Pdlim5-202ENSMUST00000058626 Pds5bQ4VA53 1446 aaKnown RBP34.34■■■■□ 3.09
Pdlim5-202ENSMUST00000058626 Smarca2Q6DIC0 1577 aa34.06■■■■□ 3.04
Pdlim5-202ENSMUST00000058626 Atad2bE9Q166 1460 aaKnown RBP34.05■■■■□ 3.04
Pdlim5-202ENSMUST00000058626 Thoc2B1AZI6 1594 aaKnown RBP33.88■■■■□ 3.01
Pdlim5-202ENSMUST00000058626 Smarca4Q3TKT4 1613 aaKnown RBP33.86■■■■□ 3.01
Pdlim5-202ENSMUST00000058626 Dnajc5bQ9CQ94 199 aa33.83■■■■□ 3.01
Pdlim5-202ENSMUST00000058626 Cecr2E9Q2Z1 1453 aa33.8■■■■□ 3
Pdlim5-202ENSMUST00000058626 Rtl1Q7M732 1744 aa33.79■■■■□ 3
Pdlim5-202ENSMUST00000058626 Iqgap2Q3UQ44 1575 aa33.64■■■□□ 2.98
Pdlim5-202ENSMUST00000058626 Ercc6F8VPZ5 1481 aa33.63■■■□□ 2.97
Pdlim5-202ENSMUST00000058626 Cc2d2aQ8CFW7 1633 aa33.35■■■□□ 2.93
Pdlim5-202ENSMUST00000058626 Wdr62Q3U3T8 1523 aa33.31■■■□□ 2.92
Pdlim5-202ENSMUST00000058626 Frmpd1A2AKB4 1549 aa33.24■■■□□ 2.91
Pdlim5-202ENSMUST00000058626 Fam135aQ6NS59 1506 aa33.2■■■□□ 2.91
Pdlim5-202ENSMUST00000058626 Brd4Q9ESU6 1400 aaKnown RBP33.19■■■□□ 2.9
Pdlim5-202ENSMUST00000058626 Ccdc136Q3TVA9 1136 aa33.15■■■□□ 2.9
Pdlim5-202ENSMUST00000058626 CftrP26361 1476 aa33.13■■■□□ 2.89
Pdlim5-202ENSMUST00000058626 Cttnbp2B9EJA2 1648 aa33.11■■■□□ 2.89
Pdlim5-202ENSMUST00000058626 Synj1Q8CHC4 1574 aa33.07■■■□□ 2.88
Pdlim5-202ENSMUST00000058626 Phldb1Q6PDH0 1371 aaKnown RBP33.05■■■□□ 2.88
Pdlim5-202ENSMUST00000058626 Baz1bQ9Z277 1479 aa32.93■■■□□ 2.86
Pdlim5-202ENSMUST00000058626 Trim41Q5NCC3 630 aa32.75■■■□□ 2.83
Pdlim5-202ENSMUST00000058626 Unc13aQ4KUS2 1712 aa32.74■■■□□ 2.83
Pdlim5-202ENSMUST00000058626 Ubl4bQ9CQ84 188 aa32.71■■■□□ 2.83
Pdlim5-202ENSMUST00000058626 Esf1Q3V1V3 845 aaKnown RBP32.61■■■□□ 2.81
Pdlim5-202ENSMUST00000058626 Mrc2Q64449 1479 aa32.43■■■□□ 2.78
Pdlim5-202ENSMUST00000058626 Rsf1E9PWW9 1441 aaKnown RBP32.29■■■□□ 2.76
Pdlim5-202ENSMUST00000058626 Kif15Q6P9L6 1387 aa32.19■■■□□ 2.74
Pdlim5-202ENSMUST00000058626 Lamc3Q9R0B6 1581 aa32.11■■■□□ 2.73
Pdlim5-202ENSMUST00000058626 Golga3P55937 1487 aa32.09■■■□□ 2.73
Pdlim5-202ENSMUST00000058626 Cux2P70298 1426 aa32.09■■■□□ 2.73
Pdlim5-202ENSMUST00000058626 Top2bQ64511 1612 aa31.99■■■□□ 2.71
Pdlim5-202ENSMUST00000058626 Cngb1E1AZ71 1325 aa31.94■■■□□ 2.7
Pdlim5-202ENSMUST00000058626 TnnQ80Z71 1560 aa31.83■■■□□ 2.69
Pdlim5-202ENSMUST00000058626 Npm1Q61937 292 aaKnown RBP31.81■■■□□ 2.68
Pdlim5-202ENSMUST00000058626 Cep164Q5DU05 1446 aa31.74■■■□□ 2.67
Pdlim5-202ENSMUST00000058626 Kif21aQ9QXL2 1672 aa31.73■■■□□ 2.67
Pdlim5-202ENSMUST00000058626 Fmn1Q05860 1466 aa31.69■■■□□ 2.66
Pdlim5-202ENSMUST00000058626 Ccdc18Q640L5 1455 aa31.69■■■□□ 2.66
Pdlim5-202ENSMUST00000058626 Lrriq1Q0P5X1 1673 aa31.66■■■□□ 2.66
Pdlim5-202ENSMUST00000058626 Camsap1A2AHC3 1581 aa31.56■■■□□ 2.64
Pdlim5-202ENSMUST00000058626 Il27Q8K3I6 234 aa31.53■■■□□ 2.64
Pdlim5-202ENSMUST00000058626 LrpprcQ6PB66 1392 aaKnown RBP31.44■■■□□ 2.62
Pdlim5-202ENSMUST00000058626 Dhx29Q6PGC1 1365 aaKnown RBP31.43■■■□□ 2.62
Pdlim5-202ENSMUST00000058626 Crocc2F6XLV1 1638 aa31.29■■■□□ 2.6
Pdlim5-202ENSMUST00000058626 PogzQ8BZH4 1409 aaKnown RBP31.28■■■□□ 2.6
Pdlim5-202ENSMUST00000058626 Urb2E9Q7L1 1524 aaKnown RBP31.28■■■□□ 2.6
Pdlim5-202ENSMUST00000058626 Plb1Q3TTY0 1478 aa31.26■■■□□ 2.59
Pdlim5-202ENSMUST00000058626 Eif4g3Q80XI3 1579 aaKnown RBP31.26■■■□□ 2.59
Pdlim5-202ENSMUST00000058626 Ccdc88bQ4QRL3 1481 aa31.23■■■□□ 2.59
Pdlim5-202ENSMUST00000058626 Grin2bQ01097 1482 aa31.17■■■□□ 2.58
Pdlim5-202ENSMUST00000058626 Duox2A2AQ99 1517 aa31.13■■■□□ 2.57
Pdlim5-202ENSMUST00000058626 Top2aQ01320 1528 aaKnown RBP31.1■■■□□ 2.57
Pdlim5-202ENSMUST00000058626 Ift140E9PY46 1464 aa31.06■■■□□ 2.56
Pdlim5-202ENSMUST00000058626 Chic1Q8CBW7 227 aa31.03■■■□□ 2.56
Pdlim5-202ENSMUST00000058626 Efcab5A0JP43 1406 aa30.98■■■□□ 2.55
Pdlim5-202ENSMUST00000058626 NrkQ9R0G8 1455 aa30.93■■■□□ 2.54
Pdlim5-202ENSMUST00000058626 Samd9lQ69Z37 1561 aa30.86■■■□□ 2.53
Pdlim5-202ENSMUST00000058626 Rusc2Q80U22 1514 aa30.85■■■□□ 2.53
Pdlim5-202ENSMUST00000058626 Disp1Q3TDN0 1521 aa30.83■■■□□ 2.53
Pdlim5-202ENSMUST00000058626 HrcG5E8J6 738 aa30.79■■■□□ 2.52
Pdlim5-202ENSMUST00000058626 Shroom4Q1W617 1475 aa30.78■■■□□ 2.52
Pdlim5-202ENSMUST00000058626 Pbrm1Q8BSQ9 1634 aaKnown RBP30.76■■■□□ 2.52
Pdlim5-202ENSMUST00000058626 Shroom2A2ALU4 1481 aa30.71■■■□□ 2.51
Pdlim5-202ENSMUST00000058626 Nup160Q9Z0W3 1402 aaKnown RBP30.71■■■□□ 2.51
Pdlim5-202ENSMUST00000058626 PtprkP35822 1457 aa30.69■■■□□ 2.5
Pdlim5-202ENSMUST00000058626 Cc2d2bA0A286YDU8 1405 aa30.68■■■□□ 2.5
Pdlim5-202ENSMUST00000058626 Rad54l2Q99NG0 1466 aa30.64■■■□□ 2.5
Pdlim5-202ENSMUST00000058626 Grin2aP35436 1464 aa30.58■■■□□ 2.49
Pdlim5-202ENSMUST00000058626 Setd1bQ8CFT2 1985 aa30.57■■■□□ 2.48
Pdlim5-202ENSMUST00000058626 Magi3Q9EQJ9 1476 aa30.57■■■□□ 2.48
Pdlim5-202ENSMUST00000058626 SynmQ70IV5 1561 aa30.54■■■□□ 2.48
Pdlim5-202ENSMUST00000058626 Zeb1Q64318 1117 aa30.48■■■□□ 2.47
Pdlim5-202ENSMUST00000058626 Npm2Q80W85 207 aa30.48■■■□□ 2.47
Pdlim5-202ENSMUST00000058626 AqrQ8CFQ3 1481 aaKnown RBP30.47■■■□□ 2.47
Pdlim5-202ENSMUST00000058626 Pabpn1Q8CCS6 302 aaKnown RBP30.47■■■□□ 2.47
Pdlim5-202ENSMUST00000058626 Gpatch8A2A6A1 1505 aa30.44■■■□□ 2.46
Pdlim5-202ENSMUST00000058626 Pla2r1Q62028 1487 aa30.43■■■□□ 2.46
Pdlim5-202ENSMUST00000058626 Dnajc5P60904 198 aa30.41■■■□□ 2.46
Pdlim5-202ENSMUST00000058626 Mroh2bQ7M6Y6 1581 aa30.37■■■□□ 2.45
Pdlim5-202ENSMUST00000058626 Gab3Q8BSM5 595 aa30.33■■■□□ 2.45
Pdlim5-202ENSMUST00000058626 Pelp1Q9DBD5 1123 aaKnown RBP30.31■■■□□ 2.44
Pdlim5-202ENSMUST00000058626 Fgd6Q69ZL1 1399 aa30.29■■■□□ 2.44
Pdlim5-202ENSMUST00000058626 Rapgef2Q8CHG7 1496 aa30.27■■■□□ 2.44
Retrieved 100 of 22,080 RNA–protein pairs in 72.2 ms