RNA–Protein interactions for RNA: ENSMUST00000032842.12

Ccdc90b-201, Transcript of Coiled-coil domain-containing protein 90B, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc90b, Length 1,596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc90b-201ENSMUST00000032842 Gm35339A0A140LHH9 1649 aa31.85■■■□□ 2.69
Ccdc90b-201ENSMUST00000032842 NischQ80TM9 1593 aa31.66■■■□□ 2.66
Ccdc90b-201ENSMUST00000032842 Abcc9P70170 1546 aa30.72■■■□□ 2.51
Ccdc90b-201ENSMUST00000032842 Abcc8B2RUS7 1588 aa30.45■■■□□ 2.46
Ccdc90b-201ENSMUST00000032842 ScribQ80U72 1612 aa29.07■■■□□ 2.24
Ccdc90b-201ENSMUST00000032842 Kdm5dQ62240 1548 aa28.22■■■□□ 2.11
Ccdc90b-201ENSMUST00000032842 NacadQ5SWP3 1504 aa28.14■■■□□ 2.09
Ccdc90b-201ENSMUST00000032842 Dcaf1Q80TR8 1506 aa28.14■■■□□ 2.09
Ccdc90b-201ENSMUST00000032842 Rhox8Q6VSS7 320 aa27.91■■■□□ 2.06
Ccdc90b-201ENSMUST00000032842 Rb1cc1Q9ESK9 1588 aa27.67■■■□□ 2.02
Ccdc90b-201ENSMUST00000032842 Sycp2Q9CUU3 1500 aa27.58■■■□□ 2.01
Ccdc90b-201ENSMUST00000032842 Ccdc180J3QNE4 1664 aa27.33■■□□□ 1.97
Ccdc90b-201ENSMUST00000032842 Chic1Q8CBW7 227 aa27.31■■□□□ 1.96
Ccdc90b-201ENSMUST00000032842 Baz1aO88379 1555 aa27.29■■□□□ 1.96
Ccdc90b-201ENSMUST00000032842 Mapk8ip2Q9ERE9 830 aa27.15■■□□□ 1.94
Ccdc90b-201ENSMUST00000032842 BicraF8VPZ9 1578 aa27.15■■□□□ 1.94
Ccdc90b-201ENSMUST00000032842 Crybg2B7ZCC2 1516 aa27.01■■□□□ 1.91
Ccdc90b-201ENSMUST00000032842 Zcchc6Q5BLK4 1491 aaKnown RBP26.8■■□□□ 1.88
Ccdc90b-201ENSMUST00000032842 Rtl1Q7M732 1744 aa26.69■■□□□ 1.86
Ccdc90b-201ENSMUST00000032842 Smarca2Q6DIC0 1577 aa26.58■■□□□ 1.85
Ccdc90b-201ENSMUST00000032842 Cecr2E9Q2Z1 1453 aa26.27■■□□□ 1.8
Ccdc90b-201ENSMUST00000032842 Pds5bQ4VA53 1446 aaKnown RBP26.15■■□□□ 1.78
Ccdc90b-201ENSMUST00000032842 Smarca4Q3TKT4 1613 aaKnown RBP26.12■■□□□ 1.77
Ccdc90b-201ENSMUST00000032842 Atad2bE9Q166 1460 aaKnown RBP26.06■■□□□ 1.76
Ccdc90b-201ENSMUST00000032842 Ccdc136Q3TVA9 1136 aa26.03■■□□□ 1.76
Ccdc90b-201ENSMUST00000032842 Iqgap2Q3UQ44 1575 aa25.91■■□□□ 1.74
Ccdc90b-201ENSMUST00000032842 Thoc2B1AZI6 1594 aaKnown RBP25.8■■□□□ 1.72
Ccdc90b-201ENSMUST00000032842 Synj1Q8CHC4 1574 aa25.8■■□□□ 1.72
Ccdc90b-201ENSMUST00000032842 Brd4Q9ESU6 1400 aaKnown RBP25.79■■□□□ 1.72
Ccdc90b-201ENSMUST00000032842 CftrP26361 1476 aa25.74■■□□□ 1.71
Ccdc90b-201ENSMUST00000032842 Cttnbp2B9EJA2 1648 aa25.71■■□□□ 1.71
Ccdc90b-201ENSMUST00000032842 Ercc6F8VPZ5 1481 aa25.65■■□□□ 1.7
Ccdc90b-201ENSMUST00000032842 Wdr62Q3U3T8 1523 aa25.58■■□□□ 1.69
Ccdc90b-201ENSMUST00000032842 Trim41Q5NCC3 630 aa25.58■■□□□ 1.69
Ccdc90b-201ENSMUST00000032842 Frmpd1A2AKB4 1549 aa25.55■■□□□ 1.68
Ccdc90b-201ENSMUST00000032842 Dnajc5bQ9CQ94 199 aa25.53■■□□□ 1.68
Ccdc90b-201ENSMUST00000032842 Cc2d2aQ8CFW7 1633 aa25.43■■□□□ 1.66
Ccdc90b-201ENSMUST00000032842 Unc13aQ4KUS2 1712 aa25.32■■□□□ 1.64
Ccdc90b-201ENSMUST00000032842 Fam135aQ6NS59 1506 aa25.32■■□□□ 1.64
Ccdc90b-201ENSMUST00000032842 Esf1Q3V1V3 845 aaKnown RBP25.27■■□□□ 1.64
Ccdc90b-201ENSMUST00000032842 Phldb1Q6PDH0 1371 aaKnown RBP25.2■■□□□ 1.62
Ccdc90b-201ENSMUST00000032842 Golga3P55937 1487 aa25.14■■□□□ 1.62
Ccdc90b-201ENSMUST00000032842 Top2bQ64511 1612 aa25.09■■□□□ 1.61
Ccdc90b-201ENSMUST00000032842 Cngb1E1AZ71 1325 aa25.03■■□□□ 1.6
Ccdc90b-201ENSMUST00000032842 Ubl4bQ9CQ84 188 aa24.94■■□□□ 1.58
Ccdc90b-201ENSMUST00000032842 Baz1bQ9Z277 1479 aa24.88■■□□□ 1.57
Ccdc90b-201ENSMUST00000032842 Rsf1E9PWW9 1441 aaKnown RBP24.87■■□□□ 1.57
Ccdc90b-201ENSMUST00000032842 Lamc3Q9R0B6 1581 aa24.86■■□□□ 1.57
Ccdc90b-201ENSMUST00000032842 Kif15Q6P9L6 1387 aa24.81■■□□□ 1.56
Ccdc90b-201ENSMUST00000032842 TnnQ80Z71 1560 aa24.79■■□□□ 1.56
Ccdc90b-201ENSMUST00000032842 Fmn1Q05860 1466 aa24.72■■□□□ 1.55
Ccdc90b-201ENSMUST00000032842 Mrc2Q64449 1479 aa24.7■■□□□ 1.54
Ccdc90b-201ENSMUST00000032842 Ccdc88bQ4QRL3 1481 aa24.68■■□□□ 1.54
Ccdc90b-201ENSMUST00000032842 Cux2P70298 1426 aa24.66■■□□□ 1.54
Ccdc90b-201ENSMUST00000032842 HrcG5E8J6 738 aa24.57■■□□□ 1.52
Ccdc90b-201ENSMUST00000032842 Phf23Q8BSN5 401 aa24.54■■□□□ 1.52
Ccdc90b-201ENSMUST00000032842 Camsap1A2AHC3 1581 aa24.5■■□□□ 1.51
Ccdc90b-201ENSMUST00000032842 Ccdc18Q640L5 1455 aa24.42■■□□□ 1.5
Ccdc90b-201ENSMUST00000032842 Kif21aQ9QXL2 1672 aa24.41■■□□□ 1.5
Ccdc90b-201ENSMUST00000032842 Top2aQ01320 1528 aaKnown RBP24.41■■□□□ 1.5
Ccdc90b-201ENSMUST00000032842 Il27Q8K3I6 234 aa24.39■■□□□ 1.5
Ccdc90b-201ENSMUST00000032842 Npm1Q61937 292 aaKnown RBP24.38■■□□□ 1.49
Ccdc90b-201ENSMUST00000032842 Cep164Q5DU05 1446 aa24.37■■□□□ 1.49
Ccdc90b-201ENSMUST00000032842 LrpprcQ6PB66 1392 aaKnown RBP24.22■■□□□ 1.47
Ccdc90b-201ENSMUST00000032842 Grin2bQ01097 1482 aa24.2■■□□□ 1.46
Ccdc90b-201ENSMUST00000032842 Lrriq1Q0P5X1 1673 aa24.19■■□□□ 1.46
Ccdc90b-201ENSMUST00000032842 Dhx29Q6PGC1 1365 aaKnown RBP24.19■■□□□ 1.46
Ccdc90b-201ENSMUST00000032842 PogzQ8BZH4 1409 aaKnown RBP24.15■■□□□ 1.46
Ccdc90b-201ENSMUST00000032842 Crocc2F6XLV1 1638 aa24.11■■□□□ 1.45
Ccdc90b-201ENSMUST00000032842 Duox2A2AQ99 1517 aa24.06■■□□□ 1.44
Ccdc90b-201ENSMUST00000032842 Gab3Q8BSM5 595 aa24.05■■□□□ 1.44
Ccdc90b-201ENSMUST00000032842 NrkQ9R0G8 1455 aa24.05■■□□□ 1.44
Ccdc90b-201ENSMUST00000032842 PtprkP35822 1457 aa24.04■■□□□ 1.44
Ccdc90b-201ENSMUST00000032842 Urb2E9Q7L1 1524 aaKnown RBP24.03■■□□□ 1.44
Ccdc90b-201ENSMUST00000032842 Plb1Q3TTY0 1478 aa24.01■■□□□ 1.43
Ccdc90b-201ENSMUST00000032842 Shroom4Q1W617 1475 aa24■■□□□ 1.43
Ccdc90b-201ENSMUST00000032842 Efcab5A0JP43 1406 aa23.95■■□□□ 1.42
Ccdc90b-201ENSMUST00000032842 Samd9lQ69Z37 1561 aa23.95■■□□□ 1.42
Ccdc90b-201ENSMUST00000032842 Rapgef2Q8CHG7 1496 aa23.91■■□□□ 1.42
Ccdc90b-201ENSMUST00000032842 Eif4g3Q80XI3 1579 aaKnown RBP23.82■■□□□ 1.4
Ccdc90b-201ENSMUST00000032842 Npm2Q80W85 207 aa23.81■■□□□ 1.4
Ccdc90b-201ENSMUST00000032842 Ift140E9PY46 1464 aa23.78■■□□□ 1.4
Ccdc90b-201ENSMUST00000032842 Eif4g1Q6NZJ6 1600 aaKnown RBP23.76■■□□□ 1.39
Ccdc90b-201ENSMUST00000032842 Rad54l2Q99NG0 1466 aa23.76■■□□□ 1.39
Ccdc90b-201ENSMUST00000032842 Disp1Q3TDN0 1521 aa23.76■■□□□ 1.39
Ccdc90b-201ENSMUST00000032842 Cep162Q6ZQ06 1403 aa23.73■■□□□ 1.39
Ccdc90b-201ENSMUST00000032842 SynmQ70IV5 1561 aa23.71■■□□□ 1.39
Ccdc90b-201ENSMUST00000032842 Arhgap35Q91YM2 1499 aa23.71■■□□□ 1.39
Ccdc90b-201ENSMUST00000032842 Setd1bQ8CFT2 1985 aa23.7■■□□□ 1.38
Ccdc90b-201ENSMUST00000032842 Mroh2bQ7M6Y6 1581 aa23.7■■□□□ 1.38
Ccdc90b-201ENSMUST00000032842 Pbrm1Q8BSQ9 1634 aaKnown RBP23.67■■□□□ 1.38
Ccdc90b-201ENSMUST00000032842 Magi3Q9EQJ9 1476 aa23.67■■□□□ 1.38
Ccdc90b-201ENSMUST00000032842 Zeb1Q64318 1117 aa23.65■■□□□ 1.38
Ccdc90b-201ENSMUST00000032842 Nup160Q9Z0W3 1402 aaKnown RBP23.63■■□□□ 1.37
Ccdc90b-201ENSMUST00000032842 Rusc2Q80U22 1514 aa23.62■■□□□ 1.37
Ccdc90b-201ENSMUST00000032842 Grin2aP35436 1464 aa23.62■■□□□ 1.37
Ccdc90b-201ENSMUST00000032842 Map3k1P53349 1493 aa23.62■■□□□ 1.37
Ccdc90b-201ENSMUST00000032842 Pla2r1Q62028 1487 aa23.6■■□□□ 1.37
Ccdc90b-201ENSMUST00000032842 AqrQ8CFQ3 1481 aaKnown RBP23.53■■□□□ 1.36
Ccdc90b-201ENSMUST00000032842 Gpatch8A2A6A1 1505 aa23.52■■□□□ 1.36
Retrieved 100 of 22,080 RNA–protein pairs in 138.8 ms