RNA–Protein interactions for RNA: ENSMUST00000030791.11

Smarcd3-201, Transcript of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smarcd3, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3-201ENSMUST00000030791 Gm35339A0A140LHH9 1649 aa40.9■■■■■ 4.14
Smarcd3-201ENSMUST00000030791 NischQ80TM9 1593 aa40.61■■■■■ 4.09
Smarcd3-201ENSMUST00000030791 Abcc9P70170 1546 aa39.36■■■■□ 3.89
Smarcd3-201ENSMUST00000030791 Abcc8B2RUS7 1588 aa39.05■■■■□ 3.84
Smarcd3-201ENSMUST00000030791 ScribQ80U72 1612 aa37.34■■■■□ 3.57
Smarcd3-201ENSMUST00000030791 Kdm5dQ62240 1548 aa36.23■■■■□ 3.39
Smarcd3-201ENSMUST00000030791 NacadQ5SWP3 1504 aa36.19■■■■□ 3.38
Smarcd3-201ENSMUST00000030791 Dcaf1Q80TR8 1506 aa36.11■■■■□ 3.37
Smarcd3-201ENSMUST00000030791 Rhox8Q6VSS7 320 aa35.7■■■■□ 3.31
Smarcd3-201ENSMUST00000030791 Rb1cc1Q9ESK9 1588 aa35.47■■■■□ 3.27
Smarcd3-201ENSMUST00000030791 Sycp2Q9CUU3 1500 aa35.45■■■■□ 3.27
Smarcd3-201ENSMUST00000030791 Ccdc180J3QNE4 1664 aa35.11■■■■□ 3.21
Smarcd3-201ENSMUST00000030791 Baz1aO88379 1555 aa35■■■■□ 3.19
Smarcd3-201ENSMUST00000030791 BicraF8VPZ9 1578 aa34.9■■■■□ 3.18
Smarcd3-201ENSMUST00000030791 Crybg2B7ZCC2 1516 aa34.72■■■■□ 3.15
Smarcd3-201ENSMUST00000030791 Zcchc6Q5BLK4 1491 aaKnown RBP34.37■■■■□ 3.09
Smarcd3-201ENSMUST00000030791 Rtl1Q7M732 1744 aa34.19■■■■□ 3.06
Smarcd3-201ENSMUST00000030791 Smarca2Q6DIC0 1577 aa34.04■■■■□ 3.04
Smarcd3-201ENSMUST00000030791 Pds5bQ4VA53 1446 aaKnown RBP33.73■■■□□ 2.99
Smarcd3-201ENSMUST00000030791 Cecr2E9Q2Z1 1453 aa33.65■■■□□ 2.98
Smarcd3-201ENSMUST00000030791 Smarca4Q3TKT4 1613 aaKnown RBP33.57■■■□□ 2.96
Smarcd3-201ENSMUST00000030791 Atad2bE9Q166 1460 aaKnown RBP33.55■■■□□ 2.96
Smarcd3-201ENSMUST00000030791 Ccdc136Q3TVA9 1136 aa33.31■■■□□ 2.92
Smarcd3-201ENSMUST00000030791 Iqgap2Q3UQ44 1575 aa33.3■■■□□ 2.92
Smarcd3-201ENSMUST00000030791 Thoc2B1AZI6 1594 aaKnown RBP33.26■■■□□ 2.92
Smarcd3-201ENSMUST00000030791 Brd4Q9ESU6 1400 aaKnown RBP33.08■■■□□ 2.89
Smarcd3-201ENSMUST00000030791 Ercc6F8VPZ5 1481 aa33.07■■■□□ 2.88
Smarcd3-201ENSMUST00000030791 Synj1Q8CHC4 1574 aa33.03■■■□□ 2.88
Smarcd3-201ENSMUST00000030791 Cttnbp2B9EJA2 1648 aa33■■■□□ 2.87
Smarcd3-201ENSMUST00000030791 CftrP26361 1476 aa32.99■■■□□ 2.87
Smarcd3-201ENSMUST00000030791 Dnajc5bQ9CQ94 199 aa32.97■■■□□ 2.87
Smarcd3-201ENSMUST00000030791 Wdr62Q3U3T8 1523 aa32.91■■■□□ 2.86
Smarcd3-201ENSMUST00000030791 Frmpd1A2AKB4 1549 aa32.85■■■□□ 2.85
Smarcd3-201ENSMUST00000030791 Trim41Q5NCC3 630 aa32.8■■■□□ 2.84
Smarcd3-201ENSMUST00000030791 Cc2d2aQ8CFW7 1633 aa32.78■■■□□ 2.84
Smarcd3-201ENSMUST00000030791 Fam135aQ6NS59 1506 aa32.62■■■□□ 2.81
Smarcd3-201ENSMUST00000030791 Unc13aQ4KUS2 1712 aa32.57■■■□□ 2.8
Smarcd3-201ENSMUST00000030791 Phldb1Q6PDH0 1371 aaKnown RBP32.49■■■□□ 2.79
Smarcd3-201ENSMUST00000030791 Esf1Q3V1V3 845 aaKnown RBP32.47■■■□□ 2.79
Smarcd3-201ENSMUST00000030791 Baz1bQ9Z277 1479 aa32.18■■■□□ 2.74
Smarcd3-201ENSMUST00000030791 Ubl4bQ9CQ84 188 aa32.17■■■□□ 2.74
Smarcd3-201ENSMUST00000030791 Golga3P55937 1487 aa32.16■■■□□ 2.74
Smarcd3-201ENSMUST00000030791 Top2bQ64511 1612 aa32.11■■■□□ 2.73
Smarcd3-201ENSMUST00000030791 Cngb1E1AZ71 1325 aa32.03■■■□□ 2.72
Smarcd3-201ENSMUST00000030791 Rsf1E9PWW9 1441 aaKnown RBP31.98■■■□□ 2.71
Smarcd3-201ENSMUST00000030791 Lamc3Q9R0B6 1581 aa31.91■■■□□ 2.7
Smarcd3-201ENSMUST00000030791 Kif15Q6P9L6 1387 aa31.88■■■□□ 2.69
Smarcd3-201ENSMUST00000030791 Mrc2Q64449 1479 aa31.86■■■□□ 2.69
Smarcd3-201ENSMUST00000030791 TnnQ80Z71 1560 aa31.75■■■□□ 2.67
Smarcd3-201ENSMUST00000030791 Cux2P70298 1426 aa31.72■■■□□ 2.67
Smarcd3-201ENSMUST00000030791 Fmn1Q05860 1466 aa31.66■■■□□ 2.66
Smarcd3-201ENSMUST00000030791 Ccdc88bQ4QRL3 1481 aa31.47■■■□□ 2.63
Smarcd3-201ENSMUST00000030791 Camsap1A2AHC3 1581 aa31.43■■■□□ 2.62
Smarcd3-201ENSMUST00000030791 Ccdc18Q640L5 1455 aa31.42■■■□□ 2.62
Smarcd3-201ENSMUST00000030791 Npm1Q61937 292 aaKnown RBP31.42■■■□□ 2.62
Smarcd3-201ENSMUST00000030791 Kif21aQ9QXL2 1672 aa31.41■■■□□ 2.62
Smarcd3-201ENSMUST00000030791 Cep164Q5DU05 1446 aa31.36■■■□□ 2.61
Smarcd3-201ENSMUST00000030791 Il27Q8K3I6 234 aa31.33■■■□□ 2.61
Smarcd3-201ENSMUST00000030791 Chic1Q8CBW7 227 aa31.31■■■□□ 2.6
Smarcd3-201ENSMUST00000030791 HrcG5E8J6 738 aa31.3■■■□□ 2.6
Smarcd3-201ENSMUST00000030791 Top2aQ01320 1528 aaKnown RBP31.21■■■□□ 2.59
Smarcd3-201ENSMUST00000030791 Lrriq1Q0P5X1 1673 aa31.19■■■□□ 2.58
Smarcd3-201ENSMUST00000030791 LrpprcQ6PB66 1392 aaKnown RBP31.14■■■□□ 2.58
Smarcd3-201ENSMUST00000030791 Dhx29Q6PGC1 1365 aaKnown RBP31.09■■■□□ 2.57
Smarcd3-201ENSMUST00000030791 Grin2bQ01097 1482 aa31.03■■■□□ 2.56
Smarcd3-201ENSMUST00000030791 PogzQ8BZH4 1409 aaKnown RBP31.01■■■□□ 2.55
Smarcd3-201ENSMUST00000030791 Crocc2F6XLV1 1638 aa31.01■■■□□ 2.55
Smarcd3-201ENSMUST00000030791 Duox2A2AQ99 1517 aa30.9■■■□□ 2.54
Smarcd3-201ENSMUST00000030791 Urb2E9Q7L1 1524 aaKnown RBP30.89■■■□□ 2.53
Smarcd3-201ENSMUST00000030791 Plb1Q3TTY0 1478 aa30.87■■■□□ 2.53
Smarcd3-201ENSMUST00000030791 NrkQ9R0G8 1455 aa30.84■■■□□ 2.53
Smarcd3-201ENSMUST00000030791 Efcab5A0JP43 1406 aa30.76■■■□□ 2.52
Smarcd3-201ENSMUST00000030791 Shroom4Q1W617 1475 aa30.74■■■□□ 2.51
Smarcd3-201ENSMUST00000030791 PtprkP35822 1457 aa30.73■■■□□ 2.51
Smarcd3-201ENSMUST00000030791 Eif4g3Q80XI3 1579 aaKnown RBP30.72■■■□□ 2.51
Smarcd3-201ENSMUST00000030791 Samd9lQ69Z37 1561 aa30.71■■■□□ 2.51
Smarcd3-201ENSMUST00000030791 Gab3Q8BSM5 595 aa30.67■■■□□ 2.5
Smarcd3-201ENSMUST00000030791 Ift140E9PY46 1464 aa30.63■■■□□ 2.49
Smarcd3-201ENSMUST00000030791 Npm2Q80W85 207 aa30.53■■■□□ 2.48
Smarcd3-201ENSMUST00000030791 Setd1bQ8CFT2 1985 aa30.52■■■□□ 2.48
Smarcd3-201ENSMUST00000030791 Disp1Q3TDN0 1521 aa30.51■■■□□ 2.48
Smarcd3-201ENSMUST00000030791 Rapgef2Q8CHG7 1496 aa30.51■■■□□ 2.47
Smarcd3-201ENSMUST00000030791 Pbrm1Q8BSQ9 1634 aaKnown RBP30.47■■■□□ 2.47
Smarcd3-201ENSMUST00000030791 Rad54l2Q99NG0 1466 aa30.46■■■□□ 2.47
Smarcd3-201ENSMUST00000030791 SynmQ70IV5 1561 aa30.41■■■□□ 2.46
Smarcd3-201ENSMUST00000030791 Rusc2Q80U22 1514 aa30.41■■■□□ 2.46
Smarcd3-201ENSMUST00000030791 Zeb1Q64318 1117 aa30.38■■■□□ 2.45
Smarcd3-201ENSMUST00000030791 Magi3Q9EQJ9 1476 aa30.36■■■□□ 2.45
Smarcd3-201ENSMUST00000030791 Mroh2bQ7M6Y6 1581 aa30.36■■■□□ 2.45
Smarcd3-201ENSMUST00000030791 Nup160Q9Z0W3 1402 aaKnown RBP30.35■■■□□ 2.45
Smarcd3-201ENSMUST00000030791 Grin2aP35436 1464 aa30.34■■■□□ 2.45
Smarcd3-201ENSMUST00000030791 Eif4g1Q6NZJ6 1600 aaKnown RBP30.32■■■□□ 2.44
Smarcd3-201ENSMUST00000030791 Arhgap35Q91YM2 1499 aa30.29■■■□□ 2.44
Smarcd3-201ENSMUST00000030791 Cep162Q6ZQ06 1403 aa30.29■■■□□ 2.44
Smarcd3-201ENSMUST00000030791 Cc2d2bA0A286YDU8 1405 aa30.26■■■□□ 2.43
Smarcd3-201ENSMUST00000030791 Pla2r1Q62028 1487 aa30.25■■■□□ 2.43
Smarcd3-201ENSMUST00000030791 Map3k1P53349 1493 aa30.23■■■□□ 2.43
Smarcd3-201ENSMUST00000030791 Gpatch8A2A6A1 1505 aa30.19■■■□□ 2.42
Smarcd3-201ENSMUST00000030791 AqrQ8CFQ3 1481 aaKnown RBP30.12■■■□□ 2.41
Smarcd3-201ENSMUST00000030791 Carmil1Q6EDY6 1374 aa30.09■■■□□ 2.41
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms