RNA–Protein interactions for RNA: ENSMUST00000022681.10

Pdlim2-201, Transcript of PDZ and LIM domain protein 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdlim2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2-201ENSMUST00000022681 Gm35339A0A140LHH9 1649 aa25.01■■□□□ 1.59
Pdlim2-201ENSMUST00000022681 NischQ80TM9 1593 aa24.88■■□□□ 1.57
Pdlim2-201ENSMUST00000022681 Abcc9P70170 1546 aa24.07■■□□□ 1.44
Pdlim2-201ENSMUST00000022681 Abcc8B2RUS7 1588 aa23.98■■□□□ 1.43
Pdlim2-201ENSMUST00000022681 ScribQ80U72 1612 aa22.96■■□□□ 1.27
Pdlim2-201ENSMUST00000022681 Kdm5dQ62240 1548 aa22.28■■□□□ 1.16
Pdlim2-201ENSMUST00000022681 NacadQ5SWP3 1504 aa22.27■■□□□ 1.16
Pdlim2-201ENSMUST00000022681 Dcaf1Q80TR8 1506 aa22.07■■□□□ 1.12
Pdlim2-201ENSMUST00000022681 Rhox8Q6VSS7 320 aa21.89■■□□□ 1.09
Pdlim2-201ENSMUST00000022681 Sycp2Q9CUU3 1500 aa21.83■■□□□ 1.09
Pdlim2-201ENSMUST00000022681 Rb1cc1Q9ESK9 1588 aa21.69■■□□□ 1.06
Pdlim2-201ENSMUST00000022681 BicraF8VPZ9 1578 aa21.5■■□□□ 1.03
Pdlim2-201ENSMUST00000022681 Baz1aO88379 1555 aa21.39■■□□□ 1.02
Pdlim2-201ENSMUST00000022681 Ccdc180J3QNE4 1664 aa21.31■■□□□ 1
Pdlim2-201ENSMUST00000022681 Crybg2B7ZCC2 1516 aa21.24■□□□□ 0.99
Pdlim2-201ENSMUST00000022681 Zcchc6Q5BLK4 1491 aaKnown RBP21.12■□□□□ 0.97
Pdlim2-201ENSMUST00000022681 Dnajc5bQ9CQ94 199 aa20.95■□□□□ 0.94
Pdlim2-201ENSMUST00000022681 Pds5bQ4VA53 1446 aaKnown RBP20.83■□□□□ 0.93
Pdlim2-201ENSMUST00000022681 Smarca2Q6DIC0 1577 aa20.79■□□□□ 0.92
Pdlim2-201ENSMUST00000022681 Cecr2E9Q2Z1 1453 aa20.72■□□□□ 0.91
Pdlim2-201ENSMUST00000022681 Atad2bE9Q166 1460 aaKnown RBP20.68■□□□□ 0.9
Pdlim2-201ENSMUST00000022681 Rtl1Q7M732 1744 aa20.61■□□□□ 0.89
Pdlim2-201ENSMUST00000022681 Smarca4Q3TKT4 1613 aaKnown RBP20.6■□□□□ 0.89
Pdlim2-201ENSMUST00000022681 Thoc2B1AZI6 1594 aaKnown RBP20.52■□□□□ 0.88
Pdlim2-201ENSMUST00000022681 Ccdc136Q3TVA9 1136 aa20.47■□□□□ 0.87
Pdlim2-201ENSMUST00000022681 Iqgap2Q3UQ44 1575 aa20.47■□□□□ 0.87
Pdlim2-201ENSMUST00000022681 Ercc6F8VPZ5 1481 aa20.39■□□□□ 0.86
Pdlim2-201ENSMUST00000022681 Frmpd1A2AKB4 1549 aa20.26■□□□□ 0.83
Pdlim2-201ENSMUST00000022681 Cc2d2aQ8CFW7 1633 aa20.26■□□□□ 0.83
Pdlim2-201ENSMUST00000022681 Wdr62Q3U3T8 1523 aa20.24■□□□□ 0.83
Pdlim2-201ENSMUST00000022681 CftrP26361 1476 aa20.24■□□□□ 0.83
Pdlim2-201ENSMUST00000022681 Brd4Q9ESU6 1400 aaKnown RBP20.24■□□□□ 0.83
Pdlim2-201ENSMUST00000022681 Synj1Q8CHC4 1574 aa20.24■□□□□ 0.83
Pdlim2-201ENSMUST00000022681 Cttnbp2B9EJA2 1648 aa20.16■□□□□ 0.82
Pdlim2-201ENSMUST00000022681 Fam135aQ6NS59 1506 aa20.11■□□□□ 0.81
Pdlim2-201ENSMUST00000022681 Trim41Q5NCC3 630 aa20.08■□□□□ 0.81
Pdlim2-201ENSMUST00000022681 Phldb1Q6PDH0 1371 aaKnown RBP20.08■□□□□ 0.8
Pdlim2-201ENSMUST00000022681 Esf1Q3V1V3 845 aaKnown RBP20■□□□□ 0.79
Pdlim2-201ENSMUST00000022681 Ubl4bQ9CQ84 188 aa19.97■□□□□ 0.79
Pdlim2-201ENSMUST00000022681 Unc13aQ4KUS2 1712 aa19.94■□□□□ 0.78
Pdlim2-201ENSMUST00000022681 Baz1bQ9Z277 1479 aa19.78■□□□□ 0.76
Pdlim2-201ENSMUST00000022681 Mrc2Q64449 1479 aa19.68■□□□□ 0.74
Pdlim2-201ENSMUST00000022681 Rsf1E9PWW9 1441 aaKnown RBP19.67■□□□□ 0.74
Pdlim2-201ENSMUST00000022681 Cngb1E1AZ71 1325 aa19.67■□□□□ 0.74
Pdlim2-201ENSMUST00000022681 Kif15Q6P9L6 1387 aa19.65■□□□□ 0.74
Pdlim2-201ENSMUST00000022681 Golga3P55937 1487 aa19.65■□□□□ 0.74
Pdlim2-201ENSMUST00000022681 Cux2P70298 1426 aa19.57■□□□□ 0.72
Pdlim2-201ENSMUST00000022681 Lamc3Q9R0B6 1581 aa19.56■□□□□ 0.72
Pdlim2-201ENSMUST00000022681 Top2bQ64511 1612 aa19.56■□□□□ 0.72
Pdlim2-201ENSMUST00000022681 Npm1Q61937 292 aaKnown RBP19.42■□□□□ 0.7
Pdlim2-201ENSMUST00000022681 TnnQ80Z71 1560 aa19.4■□□□□ 0.7
Pdlim2-201ENSMUST00000022681 Il27Q8K3I6 234 aa19.37■□□□□ 0.69
Pdlim2-201ENSMUST00000022681 Fmn1Q05860 1466 aa19.35■□□□□ 0.69
Pdlim2-201ENSMUST00000022681 Dnajc5P60904 198 aa19.34■□□□□ 0.69
Pdlim2-201ENSMUST00000022681 Kif21aQ9QXL2 1672 aa19.32■□□□□ 0.68
Pdlim2-201ENSMUST00000022681 Cep164Q5DU05 1446 aa19.31■□□□□ 0.68
Pdlim2-201ENSMUST00000022681 Ccdc18Q640L5 1455 aa19.28■□□□□ 0.68
Pdlim2-201ENSMUST00000022681 Camsap1A2AHC3 1581 aa19.24■□□□□ 0.67
Pdlim2-201ENSMUST00000022681 Ccdc88bQ4QRL3 1481 aa19.24■□□□□ 0.67
Pdlim2-201ENSMUST00000022681 Lrriq1Q0P5X1 1673 aa19.23■□□□□ 0.67
Pdlim2-201ENSMUST00000022681 Chic1Q8CBW7 227 aa19.2■□□□□ 0.66
Pdlim2-201ENSMUST00000022681 LrpprcQ6PB66 1392 aaKnown RBP19.18■□□□□ 0.66
Pdlim2-201ENSMUST00000022681 Dhx29Q6PGC1 1365 aaKnown RBP19.18■□□□□ 0.66
Pdlim2-201ENSMUST00000022681 PogzQ8BZH4 1409 aaKnown RBP19.08■□□□□ 0.64
Pdlim2-201ENSMUST00000022681 Plb1Q3TTY0 1478 aa19.07■□□□□ 0.64
Pdlim2-201ENSMUST00000022681 Urb2E9Q7L1 1524 aaKnown RBP19.06■□□□□ 0.64
Pdlim2-201ENSMUST00000022681 Crocc2F6XLV1 1638 aa19.04■□□□□ 0.64
Pdlim2-201ENSMUST00000022681 Grin2bQ01097 1482 aa19.03■□□□□ 0.64
Pdlim2-201ENSMUST00000022681 Top2aQ01320 1528 aaKnown RBP19.03■□□□□ 0.64
Pdlim2-201ENSMUST00000022681 Duox2A2AQ99 1517 aa19■□□□□ 0.63
Pdlim2-201ENSMUST00000022681 HrcG5E8J6 738 aa18.99■□□□□ 0.63
Pdlim2-201ENSMUST00000022681 Eif4g3Q80XI3 1579 aaKnown RBP18.92■□□□□ 0.62
Pdlim2-201ENSMUST00000022681 Efcab5A0JP43 1406 aa18.89■□□□□ 0.61
Pdlim2-201ENSMUST00000022681 NrkQ9R0G8 1455 aa18.87■□□□□ 0.61
Pdlim2-201ENSMUST00000022681 PtprkP35822 1457 aa18.86■□□□□ 0.61
Pdlim2-201ENSMUST00000022681 Ift140E9PY46 1464 aa18.86■□□□□ 0.61
Pdlim2-201ENSMUST00000022681 Samd9lQ69Z37 1561 aa18.83■□□□□ 0.6
Pdlim2-201ENSMUST00000022681 Disp1Q3TDN0 1521 aa18.82■□□□□ 0.6
Pdlim2-201ENSMUST00000022681 Shroom4Q1W617 1475 aa18.8■□□□□ 0.6
Pdlim2-201ENSMUST00000022681 Gab3Q8BSM5 595 aa18.8■□□□□ 0.6
Pdlim2-201ENSMUST00000022681 Rad54l2Q99NG0 1466 aa18.78■□□□□ 0.6
Pdlim2-201ENSMUST00000022681 Npm2Q80W85 207 aa18.73■□□□□ 0.59
Pdlim2-201ENSMUST00000022681 Rusc2Q80U22 1514 aa18.72■□□□□ 0.59
Pdlim2-201ENSMUST00000022681 Zeb1Q64318 1117 aa18.69■□□□□ 0.58
Pdlim2-201ENSMUST00000022681 Nup160Q9Z0W3 1402 aaKnown RBP18.69■□□□□ 0.58
Pdlim2-201ENSMUST00000022681 Magi3Q9EQJ9 1476 aa18.65■□□□□ 0.58
Pdlim2-201ENSMUST00000022681 Grin2aP35436 1464 aa18.65■□□□□ 0.58
Pdlim2-201ENSMUST00000022681 Setd1bQ8CFT2 1985 aa18.64■□□□□ 0.57
Pdlim2-201ENSMUST00000022681 Cc2d2bA0A286YDU8 1405 aa18.63■□□□□ 0.57
Pdlim2-201ENSMUST00000022681 Pbrm1Q8BSQ9 1634 aaKnown RBP18.63■□□□□ 0.57
Pdlim2-201ENSMUST00000022681 SynmQ70IV5 1561 aa18.62■□□□□ 0.57
Pdlim2-201ENSMUST00000022681 Rapgef2Q8CHG7 1496 aa18.62■□□□□ 0.57
Pdlim2-201ENSMUST00000022681 Pla2r1Q62028 1487 aa18.58■□□□□ 0.57
Pdlim2-201ENSMUST00000022681 Mroh2bQ7M6Y6 1581 aa18.57■□□□□ 0.56
Pdlim2-201ENSMUST00000022681 Shroom2A2ALU4 1481 aa18.54■□□□□ 0.56
Pdlim2-201ENSMUST00000022681 AqrQ8CFQ3 1481 aaKnown RBP18.53■□□□□ 0.56
Pdlim2-201ENSMUST00000022681 Arhgap35Q91YM2 1499 aa18.52■□□□□ 0.56
Pdlim2-201ENSMUST00000022681 Pabpn1Q8CCS6 302 aaKnown RBP18.51■□□□□ 0.55
Pdlim2-201ENSMUST00000022681 Cep162Q6ZQ06 1403 aa18.49■□□□□ 0.55
Pdlim2-201ENSMUST00000022681 Pelp1Q9DBD5 1123 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 21.5 ms