RNA–Protein interactions for RNA: ENSMUST00000019517.9

Cops3-201, Transcript of COP9 signalosome complex subunit 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cops3, Length 1,646 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3-201ENSMUST00000019517 Gm35339A0A140LHH9 1649 aa24.13■■□□□ 1.45
Cops3-201ENSMUST00000019517 NischQ80TM9 1593 aa23.95■■□□□ 1.42
Cops3-201ENSMUST00000019517 Abcc9P70170 1546 aa23.19■■□□□ 1.3
Cops3-201ENSMUST00000019517 Abcc8B2RUS7 1588 aa23.09■■□□□ 1.29
Cops3-201ENSMUST00000019517 ScribQ80U72 1612 aa22.13■■□□□ 1.13
Cops3-201ENSMUST00000019517 NacadQ5SWP3 1504 aa21.5■■□□□ 1.03
Cops3-201ENSMUST00000019517 Kdm5dQ62240 1548 aa21.47■■□□□ 1.03
Cops3-201ENSMUST00000019517 Dcaf1Q80TR8 1506 aa21.31■■□□□ 1
Cops3-201ENSMUST00000019517 Sycp2Q9CUU3 1500 aa21.06■□□□□ 0.96
Cops3-201ENSMUST00000019517 Rhox8Q6VSS7 320 aa20.96■□□□□ 0.95
Cops3-201ENSMUST00000019517 Rb1cc1Q9ESK9 1588 aa20.89■□□□□ 0.93
Cops3-201ENSMUST00000019517 BicraF8VPZ9 1578 aa20.72■□□□□ 0.91
Cops3-201ENSMUST00000019517 Baz1aO88379 1555 aa20.6■□□□□ 0.89
Cops3-201ENSMUST00000019517 Ccdc180J3QNE4 1664 aa20.58■□□□□ 0.88
Cops3-201ENSMUST00000019517 Crybg2B7ZCC2 1516 aa20.5■□□□□ 0.87
Cops3-201ENSMUST00000019517 Zcchc6Q5BLK4 1491 aaKnown RBP20.31■□□□□ 0.84
Cops3-201ENSMUST00000019517 Pds5bQ4VA53 1446 aaKnown RBP20.14■□□□□ 0.81
Cops3-201ENSMUST00000019517 Smarca2Q6DIC0 1577 aa20.02■□□□□ 0.8
Cops3-201ENSMUST00000019517 Atad2bE9Q166 1460 aaKnown RBP19.98■□□□□ 0.79
Cops3-201ENSMUST00000019517 Cecr2E9Q2Z1 1453 aa19.9■□□□□ 0.78
Cops3-201ENSMUST00000019517 Dnajc5bQ9CQ94 199 aa19.9■□□□□ 0.78
Cops3-201ENSMUST00000019517 Smarca4Q3TKT4 1613 aaKnown RBP19.88■□□□□ 0.77
Cops3-201ENSMUST00000019517 Thoc2B1AZI6 1594 aaKnown RBP19.86■□□□□ 0.77
Cops3-201ENSMUST00000019517 Rtl1Q7M732 1744 aa19.82■□□□□ 0.76
Cops3-201ENSMUST00000019517 Iqgap2Q3UQ44 1575 aa19.75■□□□□ 0.75
Cops3-201ENSMUST00000019517 Ercc6F8VPZ5 1481 aa19.72■□□□□ 0.75
Cops3-201ENSMUST00000019517 Ccdc136Q3TVA9 1136 aa19.58■□□□□ 0.73
Cops3-201ENSMUST00000019517 Cc2d2aQ8CFW7 1633 aa19.56■□□□□ 0.72
Cops3-201ENSMUST00000019517 Wdr62Q3U3T8 1523 aa19.54■□□□□ 0.72
Cops3-201ENSMUST00000019517 Frmpd1A2AKB4 1549 aa19.52■□□□□ 0.72
Cops3-201ENSMUST00000019517 Brd4Q9ESU6 1400 aaKnown RBP19.52■□□□□ 0.71
Cops3-201ENSMUST00000019517 CftrP26361 1476 aa19.49■□□□□ 0.71
Cops3-201ENSMUST00000019517 Fam135aQ6NS59 1506 aa19.46■□□□□ 0.71
Cops3-201ENSMUST00000019517 Synj1Q8CHC4 1574 aa19.46■□□□□ 0.7
Cops3-201ENSMUST00000019517 Cttnbp2B9EJA2 1648 aa19.43■□□□□ 0.7
Cops3-201ENSMUST00000019517 Phldb1Q6PDH0 1371 aaKnown RBP19.4■□□□□ 0.7
Cops3-201ENSMUST00000019517 Trim41Q5NCC3 630 aa19.29■□□□□ 0.68
Cops3-201ENSMUST00000019517 Baz1bQ9Z277 1479 aa19.24■□□□□ 0.67
Cops3-201ENSMUST00000019517 Ubl4bQ9CQ84 188 aa19.24■□□□□ 0.67
Cops3-201ENSMUST00000019517 Esf1Q3V1V3 845 aaKnown RBP19.21■□□□□ 0.67
Cops3-201ENSMUST00000019517 Unc13aQ4KUS2 1712 aa19.21■□□□□ 0.67
Cops3-201ENSMUST00000019517 Mrc2Q64449 1479 aa19.02■□□□□ 0.64
Cops3-201ENSMUST00000019517 Rsf1E9PWW9 1441 aaKnown RBP18.98■□□□□ 0.63
Cops3-201ENSMUST00000019517 Kif15Q6P9L6 1387 aa18.93■□□□□ 0.62
Cops3-201ENSMUST00000019517 Golga3P55937 1487 aa18.88■□□□□ 0.61
Cops3-201ENSMUST00000019517 Cux2P70298 1426 aa18.86■□□□□ 0.61
Cops3-201ENSMUST00000019517 Lamc3Q9R0B6 1581 aa18.85■□□□□ 0.61
Cops3-201ENSMUST00000019517 Cngb1E1AZ71 1325 aa18.85■□□□□ 0.61
Cops3-201ENSMUST00000019517 Top2bQ64511 1612 aa18.79■□□□□ 0.6
Cops3-201ENSMUST00000019517 Npm1Q61937 292 aaKnown RBP18.71■□□□□ 0.58
Cops3-201ENSMUST00000019517 TnnQ80Z71 1560 aa18.69■□□□□ 0.58
Cops3-201ENSMUST00000019517 Cep164Q5DU05 1446 aa18.63■□□□□ 0.57
Cops3-201ENSMUST00000019517 Fmn1Q05860 1466 aa18.62■□□□□ 0.57
Cops3-201ENSMUST00000019517 Kif21aQ9QXL2 1672 aa18.62■□□□□ 0.57
Cops3-201ENSMUST00000019517 Ccdc18Q640L5 1455 aa18.61■□□□□ 0.57
Cops3-201ENSMUST00000019517 Il27Q8K3I6 234 aa18.6■□□□□ 0.57
Cops3-201ENSMUST00000019517 Lrriq1Q0P5X1 1673 aa18.56■□□□□ 0.56
Cops3-201ENSMUST00000019517 Camsap1A2AHC3 1581 aa18.54■□□□□ 0.56
Cops3-201ENSMUST00000019517 LrpprcQ6PB66 1392 aaKnown RBP18.49■□□□□ 0.55
Cops3-201ENSMUST00000019517 Dhx29Q6PGC1 1365 aaKnown RBP18.49■□□□□ 0.55
Cops3-201ENSMUST00000019517 Ccdc88bQ4QRL3 1481 aa18.43■□□□□ 0.54
Cops3-201ENSMUST00000019517 PogzQ8BZH4 1409 aaKnown RBP18.38■□□□□ 0.53
Cops3-201ENSMUST00000019517 Urb2E9Q7L1 1524 aaKnown RBP18.37■□□□□ 0.53
Cops3-201ENSMUST00000019517 Plb1Q3TTY0 1478 aa18.37■□□□□ 0.53
Cops3-201ENSMUST00000019517 Crocc2F6XLV1 1638 aa18.36■□□□□ 0.53
Cops3-201ENSMUST00000019517 Chic1Q8CBW7 227 aa18.34■□□□□ 0.53
Cops3-201ENSMUST00000019517 Grin2bQ01097 1482 aa18.32■□□□□ 0.52
Cops3-201ENSMUST00000019517 Eif4g3Q80XI3 1579 aaKnown RBP18.31■□□□□ 0.52
Cops3-201ENSMUST00000019517 Duox2A2AQ99 1517 aa18.3■□□□□ 0.52
Cops3-201ENSMUST00000019517 Top2aQ01320 1528 aaKnown RBP18.29■□□□□ 0.52
Cops3-201ENSMUST00000019517 Ift140E9PY46 1464 aa18.22■□□□□ 0.51
Cops3-201ENSMUST00000019517 Efcab5A0JP43 1406 aa18.21■□□□□ 0.51
Cops3-201ENSMUST00000019517 NrkQ9R0G8 1455 aa18.18■□□□□ 0.5
Cops3-201ENSMUST00000019517 HrcG5E8J6 738 aa18.16■□□□□ 0.5
Cops3-201ENSMUST00000019517 Samd9lQ69Z37 1561 aa18.13■□□□□ 0.49
Cops3-201ENSMUST00000019517 Disp1Q3TDN0 1521 aa18.13■□□□□ 0.49
Cops3-201ENSMUST00000019517 Shroom4Q1W617 1475 aa18.1■□□□□ 0.49
Cops3-201ENSMUST00000019517 Rusc2Q80U22 1514 aa18.09■□□□□ 0.49
Cops3-201ENSMUST00000019517 PtprkP35822 1457 aa18.09■□□□□ 0.49
Cops3-201ENSMUST00000019517 Nup160Q9Z0W3 1402 aaKnown RBP18.04■□□□□ 0.48
Cops3-201ENSMUST00000019517 Rad54l2Q99NG0 1466 aa18.03■□□□□ 0.48
Cops3-201ENSMUST00000019517 Cc2d2bA0A286YDU8 1405 aa18.01■□□□□ 0.47
Cops3-201ENSMUST00000019517 Pbrm1Q8BSQ9 1634 aaKnown RBP18.01■□□□□ 0.47
Cops3-201ENSMUST00000019517 Shroom2A2ALU4 1481 aa17.99■□□□□ 0.47
Cops3-201ENSMUST00000019517 Npm2Q80W85 207 aa17.97■□□□□ 0.47
Cops3-201ENSMUST00000019517 Grin2aP35436 1464 aa17.97■□□□□ 0.47
Cops3-201ENSMUST00000019517 Magi3Q9EQJ9 1476 aa17.97■□□□□ 0.47
Cops3-201ENSMUST00000019517 Zeb1Q64318 1117 aa17.96■□□□□ 0.47
Cops3-201ENSMUST00000019517 Setd1bQ8CFT2 1985 aa17.95■□□□□ 0.46
Cops3-201ENSMUST00000019517 Gab3Q8BSM5 595 aa17.94■□□□□ 0.46
Cops3-201ENSMUST00000019517 SynmQ70IV5 1561 aa17.93■□□□□ 0.46
Cops3-201ENSMUST00000019517 Pabpn1Q8CCS6 302 aaKnown RBP17.89■□□□□ 0.45
Cops3-201ENSMUST00000019517 Pla2r1Q62028 1487 aa17.88■□□□□ 0.45
Cops3-201ENSMUST00000019517 AqrQ8CFQ3 1481 aaKnown RBP17.88■□□□□ 0.45
Cops3-201ENSMUST00000019517 Mroh2bQ7M6Y6 1581 aa17.86■□□□□ 0.45
Cops3-201ENSMUST00000019517 Rapgef2Q8CHG7 1496 aa17.85■□□□□ 0.45
Cops3-201ENSMUST00000019517 Gpatch8A2A6A1 1505 aa17.83■□□□□ 0.44
Cops3-201ENSMUST00000019517 Pelp1Q9DBD5 1123 aaKnown RBP17.83■□□□□ 0.44
Cops3-201ENSMUST00000019517 Dnajc5P60904 198 aa17.81■□□□□ 0.44
Cops3-201ENSMUST00000019517 Fgd6Q69ZL1 1399 aa17.79■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 32.8 ms