RNA–Protein interactions for RNA: ENSMUST00000018963.10

Lsp1-201, Transcript of Lymphocyte-specific protein 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lsp1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lsp1-201ENSMUST00000018963 Gm35339A0A140LHH9 1649 aa26.05■■□□□ 1.76
Lsp1-201ENSMUST00000018963 NischQ80TM9 1593 aa25.92■■□□□ 1.74
Lsp1-201ENSMUST00000018963 Abcc9P70170 1546 aa25.22■■□□□ 1.63
Lsp1-201ENSMUST00000018963 Abcc8B2RUS7 1588 aa24.85■■□□□ 1.57
Lsp1-201ENSMUST00000018963 ScribQ80U72 1612 aa23.5■■□□□ 1.35
Lsp1-201ENSMUST00000018963 Dcaf1Q80TR8 1506 aa23.2■■□□□ 1.3
Lsp1-201ENSMUST00000018963 Rhox8Q6VSS7 320 aa23■■□□□ 1.27
Lsp1-201ENSMUST00000018963 Kdm5dQ62240 1548 aa22.87■■□□□ 1.25
Lsp1-201ENSMUST00000018963 NacadQ5SWP3 1504 aa22.82■■□□□ 1.24
Lsp1-201ENSMUST00000018963 Ccdc180J3QNE4 1664 aa22.69■■□□□ 1.22
Lsp1-201ENSMUST00000018963 Rb1cc1Q9ESK9 1588 aa22.66■■□□□ 1.22
Lsp1-201ENSMUST00000018963 Rtl1Q7M732 1744 aa22.6■■□□□ 1.21
Lsp1-201ENSMUST00000018963 Baz1aO88379 1555 aa22.43■■□□□ 1.18
Lsp1-201ENSMUST00000018963 Sycp2Q9CUU3 1500 aa22.34■■□□□ 1.17
Lsp1-201ENSMUST00000018963 Crybg2B7ZCC2 1516 aa22.27■■□□□ 1.16
Lsp1-201ENSMUST00000018963 BicraF8VPZ9 1578 aa21.92■■□□□ 1.1
Lsp1-201ENSMUST00000018963 Smarca2Q6DIC0 1577 aa21.88■■□□□ 1.09
Lsp1-201ENSMUST00000018963 Zcchc6Q5BLK4 1491 aaKnown RBP21.86■■□□□ 1.09
Lsp1-201ENSMUST00000018963 Ccdc136Q3TVA9 1136 aa21.39■■□□□ 1.01
Lsp1-201ENSMUST00000018963 Cecr2E9Q2Z1 1453 aa21.38■■□□□ 1.01
Lsp1-201ENSMUST00000018963 Smarca4Q3TKT4 1613 aaKnown RBP21.24■□□□□ 0.99
Lsp1-201ENSMUST00000018963 Brd4Q9ESU6 1400 aaKnown RBP21.24■□□□□ 0.99
Lsp1-201ENSMUST00000018963 Trim41Q5NCC3 630 aa21.2■□□□□ 0.98
Lsp1-201ENSMUST00000018963 Synj1Q8CHC4 1574 aa21.13■□□□□ 0.97
Lsp1-201ENSMUST00000018963 Cttnbp2B9EJA2 1648 aa21.08■□□□□ 0.97
Lsp1-201ENSMUST00000018963 CftrP26361 1476 aa21.08■□□□□ 0.97
Lsp1-201ENSMUST00000018963 Pds5bQ4VA53 1446 aaKnown RBP21.07■□□□□ 0.96
Lsp1-201ENSMUST00000018963 Atad2bE9Q166 1460 aaKnown RBP21.06■□□□□ 0.96
Lsp1-201ENSMUST00000018963 Iqgap2Q3UQ44 1575 aa20.99■□□□□ 0.95
Lsp1-201ENSMUST00000018963 HrcG5E8J6 738 aa20.91■□□□□ 0.94
Lsp1-201ENSMUST00000018963 Golga3P55937 1487 aa20.81■□□□□ 0.92
Lsp1-201ENSMUST00000018963 Top2bQ64511 1612 aa20.77■□□□□ 0.91
Lsp1-201ENSMUST00000018963 Wdr62Q3U3T8 1523 aa20.69■□□□□ 0.9
Lsp1-201ENSMUST00000018963 Thoc2B1AZI6 1594 aaKnown RBP20.65■□□□□ 0.9
Lsp1-201ENSMUST00000018963 Frmpd1A2AKB4 1549 aa20.65■□□□□ 0.9
Lsp1-201ENSMUST00000018963 Ercc6F8VPZ5 1481 aa20.61■□□□□ 0.89
Lsp1-201ENSMUST00000018963 Esf1Q3V1V3 845 aaKnown RBP20.58■□□□□ 0.89
Lsp1-201ENSMUST00000018963 Cngb1E1AZ71 1325 aa20.53■□□□□ 0.88
Lsp1-201ENSMUST00000018963 Cep164Q5DU05 1446 aa20.53■□□□□ 0.88
Lsp1-201ENSMUST00000018963 Unc13aQ4KUS2 1712 aa20.51■□□□□ 0.87
Lsp1-201ENSMUST00000018963 Cc2d2aQ8CFW7 1633 aa20.48■□□□□ 0.87
Lsp1-201ENSMUST00000018963 Rsf1E9PWW9 1441 aaKnown RBP20.47■□□□□ 0.87
Lsp1-201ENSMUST00000018963 Ccdc88bQ4QRL3 1481 aa20.44■□□□□ 0.86
Lsp1-201ENSMUST00000018963 Fmn1Q05860 1466 aa20.41■□□□□ 0.86
Lsp1-201ENSMUST00000018963 TnnQ80Z71 1560 aa20.37■□□□□ 0.85
Lsp1-201ENSMUST00000018963 Fam135aQ6NS59 1506 aa20.34■□□□□ 0.85
Lsp1-201ENSMUST00000018963 Chic1Q8CBW7 227 aa20.34■□□□□ 0.85
Lsp1-201ENSMUST00000018963 Lamc3Q9R0B6 1581 aa20.32■□□□□ 0.84
Lsp1-201ENSMUST00000018963 Phldb1Q6PDH0 1371 aaKnown RBP20.3■□□□□ 0.84
Lsp1-201ENSMUST00000018963 Top2aQ01320 1528 aaKnown RBP20.22■□□□□ 0.83
Lsp1-201ENSMUST00000018963 Dnajc5bQ9CQ94 199 aa20.19■□□□□ 0.82
Lsp1-201ENSMUST00000018963 Baz1bQ9Z277 1479 aa20.16■□□□□ 0.82
Lsp1-201ENSMUST00000018963 Kif15Q6P9L6 1387 aa20.1■□□□□ 0.81
Lsp1-201ENSMUST00000018963 Camsap1A2AHC3 1581 aa20.03■□□□□ 0.8
Lsp1-201ENSMUST00000018963 Ubl4bQ9CQ84 188 aa19.99■□□□□ 0.79
Lsp1-201ENSMUST00000018963 Rapgef2Q8CHG7 1496 aa19.95■□□□□ 0.78
Lsp1-201ENSMUST00000018963 Ccdc18Q640L5 1455 aa19.92■□□□□ 0.78
Lsp1-201ENSMUST00000018963 Cux2P70298 1426 aa19.91■□□□□ 0.78
Lsp1-201ENSMUST00000018963 Gab3Q8BSM5 595 aa19.89■□□□□ 0.77
Lsp1-201ENSMUST00000018963 NrkQ9R0G8 1455 aa19.83■□□□□ 0.77
Lsp1-201ENSMUST00000018963 Eif4g1Q6NZJ6 1600 aaKnown RBP19.82■□□□□ 0.76
Lsp1-201ENSMUST00000018963 Grin2bQ01097 1482 aa19.81■□□□□ 0.76
Lsp1-201ENSMUST00000018963 Mrc2Q64449 1479 aa19.81■□□□□ 0.76
Lsp1-201ENSMUST00000018963 Shroom4Q1W617 1475 aa19.76■□□□□ 0.75
Lsp1-201ENSMUST00000018963 Cep162Q6ZQ06 1403 aa19.74■□□□□ 0.75
Lsp1-201ENSMUST00000018963 PtprkP35822 1457 aa19.72■□□□□ 0.75
Lsp1-201ENSMUST00000018963 LrpprcQ6PB66 1392 aaKnown RBP19.7■□□□□ 0.74
Lsp1-201ENSMUST00000018963 Npm1Q61937 292 aaKnown RBP19.7■□□□□ 0.74
Lsp1-201ENSMUST00000018963 Il27Q8K3I6 234 aa19.69■□□□□ 0.74
Lsp1-201ENSMUST00000018963 PogzQ8BZH4 1409 aaKnown RBP19.67■□□□□ 0.74
Lsp1-201ENSMUST00000018963 Kif21aQ9QXL2 1672 aa19.66■□□□□ 0.74
Lsp1-201ENSMUST00000018963 Efcab5A0JP43 1406 aa19.64■□□□□ 0.73
Lsp1-201ENSMUST00000018963 Arhgap35Q91YM2 1499 aa19.61■□□□□ 0.73
Lsp1-201ENSMUST00000018963 Map3k1P53349 1493 aa19.6■□□□□ 0.73
Lsp1-201ENSMUST00000018963 Duox2A2AQ99 1517 aa19.6■□□□□ 0.73
Lsp1-201ENSMUST00000018963 Dhx29Q6PGC1 1365 aaKnown RBP19.57■□□□□ 0.72
Lsp1-201ENSMUST00000018963 Npm2Q80W85 207 aa19.56■□□□□ 0.72
Lsp1-201ENSMUST00000018963 Crocc2F6XLV1 1638 aa19.54■□□□□ 0.72
Lsp1-201ENSMUST00000018963 Mroh2bQ7M6Y6 1581 aa19.53■□□□□ 0.72
Lsp1-201ENSMUST00000018963 Samd9lQ69Z37 1561 aa19.48■□□□□ 0.71
Lsp1-201ENSMUST00000018963 AqrQ8CFQ3 1481 aaKnown RBP19.48■□□□□ 0.71
Lsp1-201ENSMUST00000018963 SynmQ70IV5 1561 aa19.41■□□□□ 0.7
Lsp1-201ENSMUST00000018963 Clip1Q922J3 1391 aa19.36■□□□□ 0.69
Lsp1-201ENSMUST00000018963 Lrriq1Q0P5X1 1673 aa19.36■□□□□ 0.69
Lsp1-201ENSMUST00000018963 Urb2E9Q7L1 1524 aaKnown RBP19.35■□□□□ 0.69
Lsp1-201ENSMUST00000018963 Myt1lP97500 1187 aa19.35■□□□□ 0.69
Lsp1-201ENSMUST00000018963 Ehmt2Q9Z148 1263 aaKnown RBP19.34■□□□□ 0.69
Lsp1-201ENSMUST00000018963 Plb1Q3TTY0 1478 aa19.34■□□□□ 0.69
Lsp1-201ENSMUST00000018963 Carmil1Q6EDY6 1374 aa19.33■□□□□ 0.68
Lsp1-201ENSMUST00000018963 Gpatch8A2A6A1 1505 aa19.32■□□□□ 0.68
Lsp1-201ENSMUST00000018963 Erich3F6QRE9 1637 aa19.31■□□□□ 0.68
Lsp1-201ENSMUST00000018963 Setd1bQ8CFT2 1985 aa19.29■□□□□ 0.68
Lsp1-201ENSMUST00000018963 Pbrm1Q8BSQ9 1634 aaKnown RBP19.29■□□□□ 0.68
Lsp1-201ENSMUST00000018963 Rad54l2Q99NG0 1466 aa19.27■□□□□ 0.67
Lsp1-201ENSMUST00000018963 Ankrd26Q811D2 1581 aa19.26■□□□□ 0.67
Lsp1-201ENSMUST00000018963 Ift140E9PY46 1464 aa19.26■□□□□ 0.67
Lsp1-201ENSMUST00000018963 Magi3Q9EQJ9 1476 aa19.26■□□□□ 0.67
Lsp1-201ENSMUST00000018963 Eea1Q8BL66 1411 aa19.25■□□□□ 0.67
Lsp1-201ENSMUST00000018963 Polr1aO35134 1717 aaKnown RBP19.25■□□□□ 0.67
Lsp1-201ENSMUST00000018963 Disp1Q3TDN0 1521 aa19.25■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 57 ms