RNA–Protein interactions for RNA: ENSMUST00000016397.6

Nelfcd-201, Transcript of Negative elongation factor D, mousemouse

TSL 1 (best) BASIC

Gene Nelfcd, Length 2,280 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nelfcd-201ENSMUST00000016397 NischQ80TM9 1593 aa24.9■■□□□ 1.58
Nelfcd-201ENSMUST00000016397 Gm35339A0A140LHH9 1649 aa24.77■■□□□ 1.56
Nelfcd-201ENSMUST00000016397 Abcc9P70170 1546 aa24.07■■□□□ 1.44
Nelfcd-201ENSMUST00000016397 Abcc8B2RUS7 1588 aa23.92■■□□□ 1.42
Nelfcd-201ENSMUST00000016397 ScribQ80U72 1612 aa22.86■■□□□ 1.25
Nelfcd-201ENSMUST00000016397 Rhox8Q6VSS7 320 aa22.3■■□□□ 1.16
Nelfcd-201ENSMUST00000016397 Kdm5dQ62240 1548 aa22.2■■□□□ 1.14
Nelfcd-201ENSMUST00000016397 NacadQ5SWP3 1504 aa22.04■■□□□ 1.12
Nelfcd-201ENSMUST00000016397 Dcaf1Q80TR8 1506 aa21.9■■□□□ 1.1
Nelfcd-201ENSMUST00000016397 Rb1cc1Q9ESK9 1588 aa21.74■■□□□ 1.07
Nelfcd-201ENSMUST00000016397 Sycp2Q9CUU3 1500 aa21.64■■□□□ 1.05
Nelfcd-201ENSMUST00000016397 Baz1aO88379 1555 aa21.39■■□□□ 1.01
Nelfcd-201ENSMUST00000016397 BicraF8VPZ9 1578 aa21.37■■□□□ 1.01
Nelfcd-201ENSMUST00000016397 Zcchc6Q5BLK4 1491 aaKnown RBP21.21■□□□□ 0.99
Nelfcd-201ENSMUST00000016397 Ccdc180J3QNE4 1664 aa21.13■□□□□ 0.97
Nelfcd-201ENSMUST00000016397 Crybg2B7ZCC2 1516 aa21.06■□□□□ 0.96
Nelfcd-201ENSMUST00000016397 Ccdc136Q3TVA9 1136 aa20.9■□□□□ 0.94
Nelfcd-201ENSMUST00000016397 Smarca2Q6DIC0 1577 aa20.84■□□□□ 0.93
Nelfcd-201ENSMUST00000016397 Cecr2E9Q2Z1 1453 aa20.83■□□□□ 0.92
Nelfcd-201ENSMUST00000016397 Rtl1Q7M732 1744 aa20.76■□□□□ 0.91
Nelfcd-201ENSMUST00000016397 Pds5bQ4VA53 1446 aaKnown RBP20.48■□□□□ 0.87
Nelfcd-201ENSMUST00000016397 Dnajc5bQ9CQ94 199 aa20.47■□□□□ 0.87
Nelfcd-201ENSMUST00000016397 Smarca4Q3TKT4 1613 aaKnown RBP20.47■□□□□ 0.87
Nelfcd-201ENSMUST00000016397 Atad2bE9Q166 1460 aaKnown RBP20.43■□□□□ 0.86
Nelfcd-201ENSMUST00000016397 Iqgap2Q3UQ44 1575 aa20.34■□□□□ 0.85
Nelfcd-201ENSMUST00000016397 Synj1Q8CHC4 1574 aa20.33■□□□□ 0.85
Nelfcd-201ENSMUST00000016397 CftrP26361 1476 aa20.28■□□□□ 0.84
Nelfcd-201ENSMUST00000016397 Brd4Q9ESU6 1400 aaKnown RBP20.25■□□□□ 0.83
Nelfcd-201ENSMUST00000016397 Trim41Q5NCC3 630 aa20.23■□□□□ 0.83
Nelfcd-201ENSMUST00000016397 Thoc2B1AZI6 1594 aaKnown RBP20.18■□□□□ 0.82
Nelfcd-201ENSMUST00000016397 Frmpd1A2AKB4 1549 aa20.13■□□□□ 0.81
Nelfcd-201ENSMUST00000016397 Esf1Q3V1V3 845 aaKnown RBP20.12■□□□□ 0.81
Nelfcd-201ENSMUST00000016397 Cttnbp2B9EJA2 1648 aa20.1■□□□□ 0.81
Nelfcd-201ENSMUST00000016397 Ercc6F8VPZ5 1481 aa20.09■□□□□ 0.81
Nelfcd-201ENSMUST00000016397 Wdr62Q3U3T8 1523 aa20.06■□□□□ 0.8
Nelfcd-201ENSMUST00000016397 Cc2d2aQ8CFW7 1633 aa20■□□□□ 0.79
Nelfcd-201ENSMUST00000016397 Cngb1E1AZ71 1325 aa19.98■□□□□ 0.79
Nelfcd-201ENSMUST00000016397 Unc13aQ4KUS2 1712 aa19.84■□□□□ 0.77
Nelfcd-201ENSMUST00000016397 Phldb1Q6PDH0 1371 aaKnown RBP19.81■□□□□ 0.76
Nelfcd-201ENSMUST00000016397 Ubl4bQ9CQ84 188 aa19.8■□□□□ 0.76
Nelfcd-201ENSMUST00000016397 Golga3P55937 1487 aa19.79■□□□□ 0.76
Nelfcd-201ENSMUST00000016397 Fam135aQ6NS59 1506 aa19.77■□□□□ 0.76
Nelfcd-201ENSMUST00000016397 Top2bQ64511 1612 aa19.66■□□□□ 0.74
Nelfcd-201ENSMUST00000016397 Chic1Q8CBW7 227 aa19.65■□□□□ 0.74
Nelfcd-201ENSMUST00000016397 Rsf1E9PWW9 1441 aaKnown RBP19.65■□□□□ 0.74
Nelfcd-201ENSMUST00000016397 Kif15Q6P9L6 1387 aa19.62■□□□□ 0.73
Nelfcd-201ENSMUST00000016397 Ccdc88bQ4QRL3 1481 aa19.61■□□□□ 0.73
Nelfcd-201ENSMUST00000016397 Il27Q8K3I6 234 aa19.53■□□□□ 0.72
Nelfcd-201ENSMUST00000016397 Cux2P70298 1426 aa19.49■□□□□ 0.71
Nelfcd-201ENSMUST00000016397 Lamc3Q9R0B6 1581 aa19.47■□□□□ 0.71
Nelfcd-201ENSMUST00000016397 Fmn1Q05860 1466 aa19.4■□□□□ 0.7
Nelfcd-201ENSMUST00000016397 Mrc2Q64449 1479 aa19.39■□□□□ 0.69
Nelfcd-201ENSMUST00000016397 HrcG5E8J6 738 aa19.39■□□□□ 0.69
Nelfcd-201ENSMUST00000016397 TnnQ80Z71 1560 aa19.37■□□□□ 0.69
Nelfcd-201ENSMUST00000016397 Gab3Q8BSM5 595 aa19.33■□□□□ 0.68
Nelfcd-201ENSMUST00000016397 Npm1Q61937 292 aaKnown RBP19.32■□□□□ 0.68
Nelfcd-201ENSMUST00000016397 Camsap1A2AHC3 1581 aa19.24■□□□□ 0.67
Nelfcd-201ENSMUST00000016397 Ccdc18Q640L5 1455 aa19.19■□□□□ 0.66
Nelfcd-201ENSMUST00000016397 Cep164Q5DU05 1446 aa19.19■□□□□ 0.66
Nelfcd-201ENSMUST00000016397 Kif21aQ9QXL2 1672 aa19.18■□□□□ 0.66
Nelfcd-201ENSMUST00000016397 Top2aQ01320 1528 aaKnown RBP19.17■□□□□ 0.66
Nelfcd-201ENSMUST00000016397 Baz1bQ9Z277 1479 aa19.16■□□□□ 0.66
Nelfcd-201ENSMUST00000016397 LrpprcQ6PB66 1392 aaKnown RBP19.11■□□□□ 0.65
Nelfcd-201ENSMUST00000016397 Dhx29Q6PGC1 1365 aaKnown RBP19.1■□□□□ 0.65
Nelfcd-201ENSMUST00000016397 PtprkP35822 1457 aa19.09■□□□□ 0.65
Nelfcd-201ENSMUST00000016397 Grin2bQ01097 1482 aa19.05■□□□□ 0.64
Nelfcd-201ENSMUST00000016397 PogzQ8BZH4 1409 aaKnown RBP19.01■□□□□ 0.63
Nelfcd-201ENSMUST00000016397 Duox2A2AQ99 1517 aa18.99■□□□□ 0.63
Nelfcd-201ENSMUST00000016397 Plb1Q3TTY0 1478 aa18.98■□□□□ 0.63
Nelfcd-201ENSMUST00000016397 Lrriq1Q0P5X1 1673 aa18.98■□□□□ 0.63
Nelfcd-201ENSMUST00000016397 Npm2Q80W85 207 aa18.96■□□□□ 0.63
Nelfcd-201ENSMUST00000016397 Urb2E9Q7L1 1524 aaKnown RBP18.93■□□□□ 0.62
Nelfcd-201ENSMUST00000016397 Rapgef2Q8CHG7 1496 aa18.92■□□□□ 0.62
Nelfcd-201ENSMUST00000016397 Crocc2F6XLV1 1638 aa18.91■□□□□ 0.62
Nelfcd-201ENSMUST00000016397 Samd9lQ69Z37 1561 aa18.87■□□□□ 0.61
Nelfcd-201ENSMUST00000016397 NrkQ9R0G8 1455 aa18.86■□□□□ 0.61
Nelfcd-201ENSMUST00000016397 Shroom4Q1W617 1475 aa18.86■□□□□ 0.61
Nelfcd-201ENSMUST00000016397 Zeb1Q64318 1117 aa18.85■□□□□ 0.61
Nelfcd-201ENSMUST00000016397 Rad54l2Q99NG0 1466 aa18.85■□□□□ 0.61
Nelfcd-201ENSMUST00000016397 Myt1lP97500 1187 aa18.85■□□□□ 0.61
Nelfcd-201ENSMUST00000016397 Efcab5A0JP43 1406 aa18.82■□□□□ 0.6
Nelfcd-201ENSMUST00000016397 Cep162Q6ZQ06 1403 aa18.75■□□□□ 0.59
Nelfcd-201ENSMUST00000016397 Disp1Q3TDN0 1521 aa18.74■□□□□ 0.59
Nelfcd-201ENSMUST00000016397 Arhgap35Q91YM2 1499 aa18.72■□□□□ 0.59
Nelfcd-201ENSMUST00000016397 Mroh2bQ7M6Y6 1581 aa18.66■□□□□ 0.58
Nelfcd-201ENSMUST00000016397 Setd1bQ8CFT2 1985 aa18.66■□□□□ 0.58
Nelfcd-201ENSMUST00000016397 Magi3Q9EQJ9 1476 aa18.64■□□□□ 0.57
Nelfcd-201ENSMUST00000016397 Ift140E9PY46 1464 aa18.63■□□□□ 0.57
Nelfcd-201ENSMUST00000016397 Eif4g1Q6NZJ6 1600 aaKnown RBP18.63■□□□□ 0.57
Nelfcd-201ENSMUST00000016397 Grin2aP35436 1464 aa18.61■□□□□ 0.57
Nelfcd-201ENSMUST00000016397 SynmQ70IV5 1561 aa18.6■□□□□ 0.57
Nelfcd-201ENSMUST00000016397 Pla2r1Q62028 1487 aa18.6■□□□□ 0.57
Nelfcd-201ENSMUST00000016397 Ehmt2Q9Z148 1263 aaKnown RBP18.6■□□□□ 0.57
Nelfcd-201ENSMUST00000016397 Eif4g3Q80XI3 1579 aaKnown RBP18.59■□□□□ 0.57
Nelfcd-201ENSMUST00000016397 Nup160Q9Z0W3 1402 aaKnown RBP18.55■□□□□ 0.56
Nelfcd-201ENSMUST00000016397 Clip1Q922J3 1391 aa18.5■□□□□ 0.55
Nelfcd-201ENSMUST00000016397 Rusc2Q80U22 1514 aa18.5■□□□□ 0.55
Nelfcd-201ENSMUST00000016397 Ap3b1Q9Z1T1 1105 aa18.49■□□□□ 0.55
Nelfcd-201ENSMUST00000016397 Carmil1Q6EDY6 1374 aa18.47■□□□□ 0.55
Nelfcd-201ENSMUST00000016397 Map3k1P53349 1493 aa18.47■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms