RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 PDE7AQ13946 482 aa7.19□□□□□ -1.26
NECAP1-220ENST00000639841 GIT2Q14161 759 aa7.19□□□□□ -1.26
NECAP1-220ENST00000639841 PTPRCAPQ14761 206 aa7.19□□□□□ -1.26
NECAP1-220ENST00000639841 CDONQ4KMG0 1287 aa7.19□□□□□ -1.26
NECAP1-220ENST00000639841 ANXA8L1Q5VT79 327 aa7.19□□□□□ -1.26
NECAP1-220ENST00000639841 TMEM88Q6PEY1 159 aa7.19□□□□□ -1.26
NECAP1-220ENST00000639841 TMPRSS9Q7Z410 1059 aa7.19□□□□□ -1.26
NECAP1-220ENST00000639841 TMEM185AQ8NFB2 350 aa7.19□□□□□ -1.26
NECAP1-220ENST00000639841 NETO1Q8TDF5 533 aa7.19□□□□□ -1.26
NECAP1-220ENST00000639841 PEX13Q92968 403 aa7.19□□□□□ -1.26
NECAP1-220ENST00000639841 TBC1D10AQ9BXI6 508 aa7.19□□□□□ -1.26
NECAP1-220ENST00000639841 TKTL2Q9H0I9 626 aa7.19□□□□□ -1.26
NECAP1-220ENST00000639841 CDCP1Q9H5V8 836 aa7.19□□□□□ -1.26
NECAP1-220ENST00000639841 SAP30LQ9HAJ7 183 aa7.19□□□□□ -1.26
NECAP1-220ENST00000639841 PCDH18Q9HCL0 1135 aa7.19□□□□□ -1.26
NECAP1-220ENST00000639841 PANK4Q9NVE7 773 aa7.19□□□□□ -1.26
NECAP1-220ENST00000639841 SLAMF8Q9P0V8 285 aa7.19□□□□□ -1.26
NECAP1-220ENST00000639841 MYO9BQ13459 2157 aa7.18□□□□□ -1.26
NECAP1-220ENST00000639841 LAMA3Q16787 3333 aa7.18□□□□□ -1.26
NECAP1-220ENST00000639841 LCTP09848 1927 aa7.18□□□□□ -1.26
NECAP1-220ENST00000639841 PMS2P1A4D2B8 440 aa7.18□□□□□ -1.26
NECAP1-220ENST00000639841 CASC3O15234 703 aaKnown RBP7.18□□□□□ -1.26
NECAP1-220ENST00000639841 MED7O43513 233 aa7.18□□□□□ -1.26
NECAP1-220ENST00000639841 CTAG2O75638 210 aa7.18□□□□□ -1.26
NECAP1-220ENST00000639841 JUNP05412 331 aaKnown RBP7.18□□□□□ -1.26
NECAP1-220ENST00000639841 PKMP14618 531 aaKnown RBP7.18□□□□□ -1.26
NECAP1-220ENST00000639841 GNL1P36915 607 aaPredicted RBP7.18□□□□□ -1.26
NECAP1-220ENST00000639841 BLKP51451 505 aa7.18□□□□□ -1.26
NECAP1-220ENST00000639841 CARD18P57730 90 aa7.18□□□□□ -1.26
NECAP1-220ENST00000639841 HAND2P61296 217 aa7.18□□□□□ -1.26
NECAP1-220ENST00000639841 KRT76Q01546 638 aa7.18□□□□□ -1.26
NECAP1-220ENST00000639841 PIGFQ07326 219 aa7.18□□□□□ -1.26
NECAP1-220ENST00000639841 ALX1Q15699 326 aa7.18□□□□□ -1.26
NECAP1-220ENST00000639841 BMT2Q1RMZ1 405 aa7.18□□□□□ -1.26
NECAP1-220ENST00000639841 LDB1Q86U70 411 aaPredicted RBP7.18□□□□□ -1.26
NECAP1-220ENST00000639841 XYLT1Q86Y38 959 aa7.18□□□□□ -1.26
NECAP1-220ENST00000639841 WDR49Q8IV35 697 aa7.18□□□□□ -1.26
NECAP1-220ENST00000639841 MCEMP1Q8IX19 187 aa7.18□□□□□ -1.26
NECAP1-220ENST00000639841 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.18□□□□□ -1.26
NECAP1-220ENST00000639841 MIPOL1Q8TD10 442 aa7.18□□□□□ -1.26
NECAP1-220ENST00000639841 ZNF483Q8TF39 744 aaPredicted RBP7.18□□□□□ -1.26
NECAP1-220ENST00000639841 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.18□□□□□ -1.262e-6■■■■■ 29
NECAP1-220ENST00000639841 EPSTI1Q96J88 318 aa7.18□□□□□ -1.26
NECAP1-220ENST00000639841 QRFPRQ96P65 431 aa7.18□□□□□ -1.26
NECAP1-220ENST00000639841 NLKQ9UBE8 527 aa7.18□□□□□ -1.26
NECAP1-220ENST00000639841 CHRNA9Q9UGM1 479 aa7.18□□□□□ -1.26
NECAP1-220ENST00000639841 SERTAD3Q9UJW9 196 aa7.18□□□□□ -1.26
NECAP1-220ENST00000639841 AGO2Q9UKV8 859 aaKnown RBP7.18□□□□□ -1.26
NECAP1-220ENST00000639841 TNNQ9UQP3 1299 aa7.18□□□□□ -1.26
NECAP1-220ENST00000639841 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.18□□□□□ -1.26
NECAP1-220ENST00000639841 PHLPP2Q6ZVD8 1323 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 LPXNO60711 386 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 ITGAXP20702 1163 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 SFPQP23246 707 aaKnown RBP eCLIP7.17□□□□□ -1.26
NECAP1-220ENST00000639841 VIPR1P32241 457 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 SMSP52788 366 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 EEFSECP57772 596 aaKnown RBP7.17□□□□□ -1.26
NECAP1-220ENST00000639841 BPIFB4P59827 614 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 ATP2C1P98194 919 aaPredicted RBP7.17□□□□□ -1.26
NECAP1-220ENST00000639841 CHRNEQ04844 493 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 ZP2Q05996 745 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 SMN1Q16637 294 aaKnown RBP7.17□□□□□ -1.26
NECAP1-220ENST00000639841 TBR1Q16650 682 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 USH1GQ495M9 461 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 FBXO48Q5FWF7 155 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 CCDC122Q5T0U0 273 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 RPTNQ6XPR3 784 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 PRSS45Q7RTY3 260 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 ZNF551Q7Z340 670 aaPredicted RBP7.17□□□□□ -1.26
NECAP1-220ENST00000639841 TAX1BP1Q86VP1 789 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 ADHFE1Q8IWW8 467 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 REXO1L1PQ8IX06 675 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 SEPT8Q92599 483 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 NSMAFQ92636 917 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 SYN2Q92777 582 aaPredicted RBP7.17□□□□□ -1.26
NECAP1-220ENST00000639841 SLC41A2Q96JW4 573 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 USP28Q96RU2 1077 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 GON7Q9BXV9 100 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 THAP2Q9H0W7 228 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 RNF41Q9H4P4 317 aaPredicted RBP7.17□□□□□ -1.26
NECAP1-220ENST00000639841 NSUN3Q9H649 340 aaKnown RBP7.17□□□□□ -1.26
NECAP1-220ENST00000639841 CTTNBP2NLQ9P2B4 639 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 TMEM59LQ9UK28 342 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 CLEC4AQ9UMR7 237 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 A0A0C4DFX4 3053 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 ZNF716A6NP11 495 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 H3BQ06 376 aaPredicted RBP7.17□□□□□ -1.26
NECAP1-220ENST00000639841 RHBDL1O75783 438 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 TFP02787 698 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 MMP3P08254 477 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 LINGO3P0C6S8 592 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 ZNF735P0CB33 412 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 DLATP10515 647 aaKnown RBP7.17□□□□□ -1.26
NECAP1-220ENST00000639841 EPB41P11171 864 aaKnown RBP7.17□□□□□ -1.26
NECAP1-220ENST00000639841 MYOGP15173 224 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 NR1D1P20393 614 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 MMP8P22894 467 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 AKT2P31751 481 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 GALK2Q01415 458 aa7.17□□□□□ -1.26
NECAP1-220ENST00000639841 RESTQ13127 1097 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms